RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 CSB-PGBD3P0DP91 1061 aa12.87□□□□□ -0.35
LCN1-201ENST00000263598 AXIN2Q9Y2T1 843 aa12.87□□□□□ -0.35
LCN1-201ENST00000263598 PEAK1Q9H792 1746 aa12.87□□□□□ -0.35
LCN1-201ENST00000263598 CPSF1Q10570 1443 aaKnown RBP12.87□□□□□ -0.35
LCN1-201ENST00000263598 RGPD3A6NKT7 1758 aaPredicted RBP12.86□□□□□ -0.35
LCN1-201ENST00000263598 RGPD4Q7Z3J3 1758 aa12.86□□□□□ -0.35
LCN1-201ENST00000263598 BCL9O00512 1426 aa12.86□□□□□ -0.35
LCN1-201ENST00000263598 ARHGEF25Q86VW2 580 aa12.85□□□□□ -0.35
LCN1-201ENST00000263598 MARCH10Q8NA82 808 aaPredicted RBP12.85□□□□□ -0.35
LCN1-201ENST00000263598 CARD10Q9BWT7 1032 aa12.85□□□□□ -0.35
LCN1-201ENST00000263598 PIK3C2AO00443 1686 aa12.85□□□□□ -0.35
LCN1-201ENST00000263598 TTC21BQ7Z4L5 1316 aa12.85□□□□□ -0.35
LCN1-201ENST00000263598 TTC21AQ8NDW8 1320 aa12.85□□□□□ -0.35
LCN1-201ENST00000263598 EXOC5O00471 708 aa12.84□□□□□ -0.35
LCN1-201ENST00000263598 SOX12O15370 315 aa12.84□□□□□ -0.35
LCN1-201ENST00000263598 L3MBTL2Q969R5 705 aa12.84□□□□□ -0.35
LCN1-201ENST00000263598 ANO8Q9HCE9 1232 aaPredicted RBP12.84□□□□□ -0.35
LCN1-201ENST00000263598 PTF1AQ7RTS3 328 aa12.83□□□□□ -0.36
LCN1-201ENST00000263598 STK32BQ9NY57 414 aa12.83□□□□□ -0.36
LCN1-201ENST00000263598 COL18A1P39060 1754 aa12.83□□□□□ -0.36
LCN1-201ENST00000263598 ROCK2O75116 1388 aaKnown RBP12.82□□□□□ -0.36
LCN1-201ENST00000263598 TRPM1Q7Z4N2 1603 aa12.82□□□□□ -0.36
LCN1-201ENST00000263598 TXNRD1Q16881 649 aa12.82□□□□□ -0.36
LCN1-201ENST00000263598 PROM2Q8N271 834 aa12.82□□□□□ -0.36
LCN1-201ENST00000263598 SBF2Q86WG5 1849 aa12.82□□□□□ -0.36
LCN1-201ENST00000263598 CCDC7Q96M83 1385 aa12.81□□□□□ -0.36
LCN1-201ENST00000263598 ZBTB7AO95365 584 aa12.81□□□□□ -0.36
LCN1-201ENST00000263598 WNK3Q9BYP7 1800 aa12.81□□□□□ -0.36
LCN1-201ENST00000263598 KTN1Q86UP2 1357 aaKnown RBP12.81□□□□□ -0.36
LCN1-201ENST00000263598 AKAP12Q02952 1782 aa12.8□□□□□ -0.36
LCN1-201ENST00000263598 PDGFDQ9GZP0 370 aaPredicted RBP12.8□□□□□ -0.36
LCN1-201ENST00000263598 CASZ1Q86V15 1759 aa12.79□□□□□ -0.36
LCN1-201ENST00000263598 ABCC6O95255 1503 aa12.79□□□□□ -0.36
LCN1-201ENST00000263598 SLC15A2Q16348 729 aa12.79□□□□□ -0.36
LCN1-201ENST00000263598 ATF5Q9Y2D1 282 aaPredicted RBP12.79□□□□□ -0.36
LCN1-201ENST00000263598 TNS2Q63HR2 1409 aa12.79□□□□□ -0.36
LCN1-201ENST00000263598 NFAT5O94916 1531 aa12.78□□□□□ -0.36
LCN1-201ENST00000263598 PTGER2P43116 358 aa12.78□□□□□ -0.36
LCN1-201ENST00000263598 MTFR1LQ9H019 292 aa12.78□□□□□ -0.36
LCN1-201ENST00000263598 NEUROD1Q13562 356 aa12.77□□□□□ -0.37
LCN1-201ENST00000263598 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.77□□□□□ -0.37
LCN1-201ENST00000263598 NLRP2Q9NX02 1062 aa12.77□□□□□ -0.37
LCN1-201ENST00000263598 SIN3AQ96ST3 1273 aa12.76□□□□□ -0.37
LCN1-201ENST00000263598 RGPD5Q99666 1765 aa12.76□□□□□ -0.37
LCN1-201ENST00000263598 IL2RBP14784 551 aa12.75□□□□□ -0.37
LCN1-201ENST00000263598 ERBB3P21860 1342 aa12.75□□□□□ -0.37
LCN1-201ENST00000263598 MYOM1P52179 1685 aa12.75□□□□□ -0.37
LCN1-201ENST00000263598 USP31Q70CQ4 1352 aa12.75□□□□□ -0.37
LCN1-201ENST00000263598 HDGFL2Q7Z4V5 671 aaPredicted RBP12.75□□□□□ -0.37
LCN1-201ENST00000263598 ACSBG1Q96GR2 724 aa12.75□□□□□ -0.37
LCN1-201ENST00000263598 SYT17Q9BSW7 474 aa12.75□□□□□ -0.37
LCN1-201ENST00000263598 FHDC1Q9C0D6 1143 aaPredicted RBP12.75□□□□□ -0.37
LCN1-201ENST00000263598 SBNO2Q9Y2G9 1366 aa12.74□□□□□ -0.37
LCN1-201ENST00000263598 NME9Q86XW9 330 aa12.74□□□□□ -0.37
LCN1-201ENST00000263598 NHSQ6T4R5 1651 aa12.73□□□□□ -0.37
LCN1-201ENST00000263598 TMC1Q8TDI8 760 aa12.73□□□□□ -0.37
LCN1-201ENST00000263598 ANKRD24Q8TF21 1146 aa12.73□□□□□ -0.37
LCN1-201ENST00000263598 MON2Q7Z3U7 1717 aa12.72□□□□□ -0.37
LCN1-201ENST00000263598 ARXQ96QS3 562 aa12.72□□□□□ -0.37
LCN1-201ENST00000263598 SGIP1Q9BQI5 828 aa12.72□□□□□ -0.37
LCN1-201ENST00000263598 CARD11Q9BXL7 1154 aa12.72□□□□□ -0.37
LCN1-201ENST00000263598 ZNF784Q8NCA9 323 aaPredicted RBP12.71□□□□□ -0.37
LCN1-201ENST00000263598 TERF2IPQ9NYB0 399 aa12.71□□□□□ -0.37
LCN1-201ENST00000263598 CD163L1Q9NR16 1453 aa12.7□□□□□ -0.38
LCN1-201ENST00000263598 UTRNP46939 3433 aa12.7□□□□□ -0.38
LCN1-201ENST00000263598 USP54Q70EL1 1684 aa12.7□□□□□ -0.38
LCN1-201ENST00000263598 EDC4Q6P2E9 1401 aaKnown RBP12.7□□□□□ -0.38
LCN1-201ENST00000263598 SLC27A3Q5K4L6 730 aa12.69□□□□□ -0.38
LCN1-201ENST00000263598 SLC12A5Q9H2X9 1139 aa12.69□□□□□ -0.38
LCN1-201ENST00000263598 MAP3K5Q99683 1374 aa12.69□□□□□ -0.38
LCN1-201ENST00000263598 ZNF827Q17R98 1081 aa12.68□□□□□ -0.38
LCN1-201ENST00000263598 DDX54Q8TDD1 881 aaKnown RBP12.68□□□□□ -0.38
LCN1-201ENST00000263598 IP6K1Q92551 441 aa12.68□□□□□ -0.38
LCN1-201ENST00000263598 LRRC4BQ9NT99 713 aa12.68□□□□□ -0.38
LCN1-201ENST00000263598 PAPPAQ13219 1627 aa12.68□□□□□ -0.38
LCN1-201ENST00000263598 LTN1O94822 1766 aa12.68□□□□□ -0.38
LCN1-201ENST00000263598 POLD1P28340 1107 aa12.67□□□□□ -0.38
LCN1-201ENST00000263598 SLC16A10Q8TF71 515 aa12.67□□□□□ -0.38
LCN1-201ENST00000263598 PUS7Q96PZ0 661 aaKnown RBP12.67□□□□□ -0.38
LCN1-201ENST00000263598 A0A1W2PP64 1363 aa12.67□□□□□ -0.38
LCN1-201ENST00000263598 BTAF1O14981 1849 aa12.67□□□□□ -0.38
LCN1-201ENST00000263598 GPR162Q16538 588 aa12.66□□□□□ -0.38
LCN1-201ENST00000263598 AKT1S1Q96B36 256 aa12.66□□□□□ -0.38
LCN1-201ENST00000263598 LTV1Q96GA3 475 aaPredicted RBP12.66□□□□□ -0.38
LCN1-201ENST00000263598 SYTL4Q96C24 671 aaPredicted RBP12.65□□□□□ -0.38
LCN1-201ENST00000263598 TFCP2L1Q9NZI6 479 aa12.65□□□□□ -0.38
LCN1-201ENST00000263598 SLC24A1O60721 1099 aa12.64□□□□□ -0.39
LCN1-201ENST00000263598 KLHL34Q8N239 644 aa12.64□□□□□ -0.39
LCN1-201ENST00000263598 COG3Q96JB2 828 aa12.64□□□□□ -0.39
LCN1-201ENST00000263598 AMPHP49418 695 aa12.63□□□□□ -0.39
LCN1-201ENST00000263598 PRIM1P49642 420 aaKnown RBP12.63□□□□□ -0.39
LCN1-201ENST00000263598 ANKRD36BQ8N2N9 1353 aa12.63□□□□□ -0.39
LCN1-201ENST00000263598 TONSLQ96HA7 1378 aa12.63□□□□□ -0.39
LCN1-201ENST00000263598 FAM208AQ9UK61 1670 aaKnown RBP12.63□□□□□ -0.39
LCN1-201ENST00000263598 PNPLA7Q6ZV29 1317 aa12.62□□□□□ -0.39
LCN1-201ENST00000263598 HOXC9P31274 260 aa12.62□□□□□ -0.39
LCN1-201ENST00000263598 C1QTNF8P60827 252 aa12.62□□□□□ -0.39
LCN1-201ENST00000263598 ZCRB1Q8TBF4 217 aaKnown RBP12.62□□□□□ -0.39
LCN1-201ENST00000263598 MAP3K19Q56UN5 1328 aa12.62□□□□□ -0.39
LCN1-201ENST00000263598 SENP3-EIF4A1A0A087X0R7 540 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms