RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 CCDC9Q9Y3X0 531 aaKnown RBP25.66■■□□□ 1.7
CYSTM1-201ENST00000261811 VPS72Q15906 364 aa25.64■■□□□ 1.7
CYSTM1-201ENST00000261811 CAMTA1Q9Y6Y1 1673 aa25.63■■□□□ 1.69
CYSTM1-201ENST00000261811 STRN4Q9NRL3 753 aa25.63■■□□□ 1.69
CYSTM1-201ENST00000261811 GJD4Q96KN9 370 aaPredicted RBP25.62■■□□□ 1.69
CYSTM1-201ENST00000261811 AMPHP49418 695 aa25.59■■□□□ 1.69
CYSTM1-201ENST00000261811 CDK12Q9NYV4 1490 aaPredicted RBP25.59■■□□□ 1.69
CYSTM1-201ENST00000261811 COL5A2P05997 1499 aaPredicted RBP25.58■■□□□ 1.69
CYSTM1-201ENST00000261811 MORC1Q86VD1 984 aa25.57■■□□□ 1.68
CYSTM1-201ENST00000261811 FAM208AQ9UK61 1670 aaKnown RBP25.56■■□□□ 1.68
CYSTM1-201ENST00000261811 BLMP54132 1417 aaPredicted RBP25.56■■□□□ 1.68
CYSTM1-201ENST00000261811 PER1O15534 1290 aaPredicted RBP25.56■■□□□ 1.68
CYSTM1-201ENST00000261811 CSB-PGBD3P0DP91 1061 aa25.56■■□□□ 1.68
CYSTM1-201ENST00000261811 RTL1A6NKG5 1358 aa25.55■■□□□ 1.68
CYSTM1-201ENST00000261811 KIF24Q5T7B8 1368 aa25.55■■□□□ 1.68
CYSTM1-201ENST00000261811 GLI3P10071 1580 aa25.55■■□□□ 1.68
CYSTM1-201ENST00000261811 IP6K1Q92551 441 aa25.55■■□□□ 1.68
CYSTM1-201ENST00000261811 MAP3K19Q56UN5 1328 aa25.55■■□□□ 1.68
CYSTM1-201ENST00000261811 AXIN2Q9Y2T1 843 aa25.54■■□□□ 1.68
CYSTM1-201ENST00000261811 SPATA31A5Q5VU36 1347 aa25.54■■□□□ 1.68
CYSTM1-201ENST00000261811 SPATA31A7Q8IWB4 1347 aa25.54■■□□□ 1.68
CYSTM1-201ENST00000261811 AMER1Q5JTC6 1135 aaPredicted RBP25.53■■□□□ 1.68
CYSTM1-201ENST00000261811 TOM1L2Q6ZVM7 507 aa25.53■■□□□ 1.68
CYSTM1-201ENST00000261811 WDR17Q8IZU2 1322 aa25.53■■□□□ 1.68
CYSTM1-201ENST00000261811 CRB1P82279 1406 aa25.53■■□□□ 1.68
CYSTM1-201ENST00000261811 RRS1Q15050 365 aaKnown RBP25.52■■□□□ 1.68
CYSTM1-201ENST00000261811 NPC1L1Q9UHC9 1359 aa25.52■■□□□ 1.68
CYSTM1-201ENST00000261811 SPATA31A1Q5TZJ5 1347 aa25.51■■□□□ 1.67
CYSTM1-201ENST00000261811 LARP1Q6PKG0 1096 aaKnown RBP25.51■■□□□ 1.67
CYSTM1-201ENST00000261811 FBLN1P23142 703 aa25.5■■□□□ 1.67
CYSTM1-201ENST00000261811 HOXC9P31274 260 aa25.5■■□□□ 1.67
CYSTM1-201ENST00000261811 TNNT2P45379 298 aaPredicted RBP25.5■■□□□ 1.67
CYSTM1-201ENST00000261811 THRAP3Q9Y2W1 955 aaKnown RBP25.5■■□□□ 1.67
CYSTM1-201ENST00000261811 SMG6Q86US8 1419 aaKnown RBP25.49■■□□□ 1.67
CYSTM1-201ENST00000261811 FLT4P35916 1363 aa25.49■■□□□ 1.67
CYSTM1-201ENST00000261811 CC2D1BQ5T0F9 858 aaKnown RBP25.49■■□□□ 1.67
CYSTM1-201ENST00000261811 USP35Q9P2H5 1018 aa25.49■■□□□ 1.67
CYSTM1-201ENST00000261811 A0A0G2JS52 829 aa25.48■■□□□ 1.67
CYSTM1-201ENST00000261811 PPM1GO15355 546 aaPredicted RBP25.48■■□□□ 1.67
CYSTM1-201ENST00000261811 MYT1Q01538 1121 aa25.48■■□□□ 1.67
CYSTM1-201ENST00000261811 ANKRD24Q8TF21 1146 aa25.48■■□□□ 1.67
CYSTM1-201ENST00000261811 ERBB3P21860 1342 aa25.47■■□□□ 1.67
CYSTM1-201ENST00000261811 TCP11L2Q8N4U5 519 aa25.47■■□□□ 1.67
CYSTM1-201ENST00000261811 BRWD3Q6RI45 1802 aa25.47■■□□□ 1.67
CYSTM1-201ENST00000261811 PEAK1Q9H792 1746 aa25.46■■□□□ 1.67
CYSTM1-201ENST00000261811 RGS12O14924 1447 aa25.46■■□□□ 1.67
CYSTM1-201ENST00000261811 WNK3Q9BYP7 1800 aa25.46■■□□□ 1.67
CYSTM1-201ENST00000261811 ZNF316A6NFI3 1004 aaPredicted RBP25.45■■□□□ 1.66
CYSTM1-201ENST00000261811 ONECUT3O60422 494 aaPredicted RBP25.45■■□□□ 1.66
CYSTM1-201ENST00000261811 FAM98CQ17RN3 349 aaKnown RBP25.45■■□□□ 1.66
CYSTM1-201ENST00000261811 CARD10Q9BWT7 1032 aa25.45■■□□□ 1.66
CYSTM1-201ENST00000261811 DDX10Q13206 875 aaKnown RBP25.44■■□□□ 1.66
CYSTM1-201ENST00000261811 BARGINQ6ZT62 677 aa25.44■■□□□ 1.66
CYSTM1-201ENST00000261811 LTV1Q96GA3 475 aaPredicted RBP25.44■■□□□ 1.66
CYSTM1-201ENST00000261811 NLRP2Q9NX02 1062 aa25.44■■□□□ 1.66
CYSTM1-201ENST00000261811 EMILIN1Q9Y6C2 1016 aa25.44■■□□□ 1.66
CYSTM1-201ENST00000261811 INSRP06213 1382 aa25.44■■□□□ 1.66
CYSTM1-201ENST00000261811 RGPD2P0DJD1 1756 aa25.44■■□□□ 1.66
CYSTM1-201ENST00000261811 POLKQ9UBT6 870 aa25.43■■□□□ 1.66
CYSTM1-201ENST00000261811 CNGB1Q14028 1251 aaPredicted RBP25.42■■□□□ 1.66
CYSTM1-201ENST00000261811 SEPT12Q8IYM1 358 aa25.42■■□□□ 1.66
CYSTM1-201ENST00000261811 CDCA7Q9BWT1 371 aaPredicted RBP25.41■■□□□ 1.66
CYSTM1-201ENST00000261811 THSD7AQ9UPZ6 1657 aa25.41■■□□□ 1.66
CYSTM1-201ENST00000261811 PARP4Q9UKK3 1724 aaKnown RBP25.4■■□□□ 1.66
CYSTM1-201ENST00000261811 HSP90AB2PQ58FF8 381 aa25.39■■□□□ 1.66
CYSTM1-201ENST00000261811 PDE3BQ13370 1112 aa25.34■■□□□ 1.65
CYSTM1-201ENST00000261811 KRT27Q7Z3Y8 459 aa25.34■■□□□ 1.65
CYSTM1-201ENST00000261811 IL2RBP14784 551 aa25.32■■□□□ 1.64
CYSTM1-201ENST00000261811 MTHFSP49914 203 aa25.32■■□□□ 1.64
CYSTM1-201ENST00000261811 DDB1Q16531 1140 aa25.31■■□□□ 1.64
CYSTM1-201ENST00000261811 LRRC37A3O60309 1634 aa25.3■■□□□ 1.64
CYSTM1-201ENST00000261811 EXOC5O00471 708 aa25.29■■□□□ 1.64
CYSTM1-201ENST00000261811 NBPF6Q5VWK0 638 aa25.29■■□□□ 1.64
CYSTM1-201ENST00000261811 NBPF4Q96M43 638 aa25.29■■□□□ 1.64
CYSTM1-201ENST00000261811 CFAP53Q96M91 514 aa25.29■■□□□ 1.64
CYSTM1-201ENST00000261811 EIF4A2Q14240 407 aaKnown RBP25.27■■□□□ 1.64
CYSTM1-201ENST00000261811 RALBP1Q15311 655 aa25.27■■□□□ 1.64
CYSTM1-201ENST00000261811 RAPGEF4Q8WZA2 1011 aa25.27■■□□□ 1.64
CYSTM1-201ENST00000261811 DISP2A7MBM2 1401 aa25.26■■□□□ 1.63
CYSTM1-201ENST00000261811 KAT6BQ8WYB5 2073 aa25.25■■□□□ 1.63
CYSTM1-201ENST00000261811 PARD3Q8TEW0 1356 aa25.24■■□□□ 1.63
CYSTM1-201ENST00000261811 TATP17735 454 aaPredicted RBP25.23■■□□□ 1.63
CYSTM1-201ENST00000261811 PPP2R1AP30153 589 aa25.23■■□□□ 1.63
CYSTM1-201ENST00000261811 EYA1Q99502 592 aa25.23■■□□□ 1.63
CYSTM1-201ENST00000261811 DIAPH1O60610 1272 aaKnown RBP25.22■■□□□ 1.63
CYSTM1-201ENST00000261811 USHBP1Q8N6Y0 703 aa25.22■■□□□ 1.63
CYSTM1-201ENST00000261811 TNS2Q63HR2 1409 aa25.22■■□□□ 1.63
CYSTM1-201ENST00000261811 FAM196AQ6ZSG2 479 aa25.21■■□□□ 1.63
CYSTM1-201ENST00000261811 RGPD1P0DJD0 1748 aa25.19■■□□□ 1.62
CYSTM1-201ENST00000261811 CCDC125Q86Z20 511 aa25.19■■□□□ 1.62
CYSTM1-201ENST00000261811 IGSF1Q8N6C5 1336 aa25.19■■□□□ 1.62
CYSTM1-201ENST00000261811 OVOS2A0A0G2JMS6 1433 aa25.18■■□□□ 1.62
CYSTM1-201ENST00000261811 NCAPD2Q15021 1401 aa25.18■■□□□ 1.62
CYSTM1-201ENST00000261811 SBF2Q86WG5 1849 aa25.18■■□□□ 1.62
CYSTM1-201ENST00000261811 IL13P35225 146 aa25.17■■□□□ 1.62
CYSTM1-201ENST00000261811 ZCRB1Q8TBF4 217 aaKnown RBP25.17■■□□□ 1.62
CYSTM1-201ENST00000261811 NUDCQ9Y266 331 aa25.17■■□□□ 1.62
CYSTM1-201ENST00000261811 SF3B2Q13435 895 aaKnown RBP25.16■■□□□ 1.62
CYSTM1-201ENST00000261811 MEGF6O75095 1541 aa25.16■■□□□ 1.62
CYSTM1-201ENST00000261811 PLEKHG2Q9H7P9 1386 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms