RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 MICALCLQ6ZW33 695 aa12.7□□□□□ -0.38
SLC6A4-201ENST00000261707 KIF18AQ8NI77 898 aa12.7□□□□□ -0.38
SLC6A4-201ENST00000261707 NUP62CLQ9H1M0 184 aa12.7□□□□□ -0.38
SLC6A4-201ENST00000261707 BRD4O60885 1362 aaPredicted RBP12.7□□□□□ -0.38
SLC6A4-201ENST00000261707 KRT85P78386 507 aa12.7□□□□□ -0.38
SLC6A4-201ENST00000261707 ATP2B2Q01814 1243 aa12.7□□□□□ -0.38
SLC6A4-201ENST00000261707 LRRFIP2Q9Y608 721 aaKnown RBP12.7□□□□□ -0.38
SLC6A4-201ENST00000261707 CA8P35219 290 aa12.69□□□□□ -0.38
SLC6A4-201ENST00000261707 RNF187Q5TA31 235 aaPredicted RBP12.69□□□□□ -0.38
SLC6A4-201ENST00000261707 DDX58O95786 925 aaKnown RBP12.69□□□□□ -0.38
SLC6A4-201ENST00000261707 KDM4AO75164 1064 aa12.69□□□□□ -0.38
SLC6A4-201ENST00000261707 ANKRD18AQ8IVF6 992 aa12.69□□□□□ -0.38
SLC6A4-201ENST00000261707 CASQ1P31415 396 aa12.68□□□□□ -0.38
SLC6A4-201ENST00000261707 TXLNBQ8N3L3 684 aa12.68□□□□□ -0.38
SLC6A4-201ENST00000261707 CCDC148Q8NFR7 591 aa12.68□□□□□ -0.38
SLC6A4-201ENST00000261707 FKBP5Q13451 457 aaPredicted RBP12.68□□□□□ -0.38
SLC6A4-201ENST00000261707 NECTIN2Q92692 538 aa12.68□□□□□ -0.38
SLC6A4-201ENST00000261707 XBP1P17861 261 aa12.68□□□□□ -0.38
SLC6A4-201ENST00000261707 TRAK1Q9UPV9 953 aa12.68□□□□□ -0.38
SLC6A4-201ENST00000261707 SMG6Q86US8 1419 aaKnown RBP12.68□□□□□ -0.38
SLC6A4-201ENST00000261707 MCM5P33992 734 aa12.68□□□□□ -0.38
SLC6A4-201ENST00000261707 HNRNPMP52272 730 aaKnown RBP eCLIP12.68□□□□□ -0.38
SLC6A4-201ENST00000261707 CEP57L1Q8IYX8 460 aa12.68□□□□□ -0.38
SLC6A4-201ENST00000261707 GCC1Q96CN9 775 aa12.68□□□□□ -0.38
SLC6A4-201ENST00000261707 DNAAF4Q8WXU2 420 aa12.67□□□□□ -0.38
SLC6A4-201ENST00000261707 SLC26A8Q96RN1 970 aa12.67□□□□□ -0.38
SLC6A4-201ENST00000261707 MNAT1P51948 309 aa12.67□□□□□ -0.38
SLC6A4-201ENST00000261707 MAP9Q49MG5 647 aa12.67□□□□□ -0.38
SLC6A4-201ENST00000261707 GTPBP4Q9BZE4 634 aaKnown RBP12.67□□□□□ -0.38
SLC6A4-201ENST00000261707 UPF3BQ9BZI7 483 aaKnown RBP12.67□□□□□ -0.38
SLC6A4-201ENST00000261707 LUC7LQ9NQ29 371 aaKnown RBP12.67□□□□□ -0.38
SLC6A4-201ENST00000261707 CLCN1P35523 988 aa12.67□□□□□ -0.38
SLC6A4-201ENST00000261707 DIAPH1O60610 1272 aaKnown RBP12.67□□□□□ -0.38
SLC6A4-201ENST00000261707 MAP2K1Q02750 393 aaPredicted RBP12.67□□□□□ -0.38
SLC6A4-201ENST00000261707 CUX2O14529 1486 aa12.67□□□□□ -0.38
SLC6A4-201ENST00000261707 ME1P48163 572 aa12.67□□□□□ -0.38
SLC6A4-201ENST00000261707 SPATA32Q96LK8 384 aa12.66□□□□□ -0.38
SLC6A4-201ENST00000261707 LMAN1P49257 510 aa12.66□□□□□ -0.38
SLC6A4-201ENST00000261707 PDE3AQ14432 1141 aa12.66□□□□□ -0.38
SLC6A4-201ENST00000261707 ESCO1Q5FWF5 840 aa12.66□□□□□ -0.38
SLC6A4-201ENST00000261707 CCDC18Q5T9S5 1454 aa12.66□□□□□ -0.38
SLC6A4-201ENST00000261707 PRIMPOLQ96LW4 560 aa12.66□□□□□ -0.38
SLC6A4-201ENST00000261707 MAP3K11Q16584 847 aa12.66□□□□□ -0.38
SLC6A4-201ENST00000261707 NUTM2GQ5VZR2 741 aa12.66□□□□□ -0.38
SLC6A4-201ENST00000261707 GOLGA6L10A0A0M3HER8 536 aa12.66□□□□□ -0.38
SLC6A4-201ENST00000261707 SMTNL1A8MU46 457 aa12.66□□□□□ -0.38
SLC6A4-201ENST00000261707 NF2P35240 595 aa12.66□□□□□ -0.38
SLC6A4-201ENST00000261707 GNAI1P63096 354 aa12.66□□□□□ -0.38
SLC6A4-201ENST00000261707 ABCC8Q09428 1581 aa12.66□□□□□ -0.38
SLC6A4-201ENST00000261707 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
SLC6A4-201ENST00000261707 CFAP45Q9UL16 551 aa12.65□□□□□ -0.38
SLC6A4-201ENST00000261707 ZSCAN12O43309 604 aa12.65□□□□□ -0.38
SLC6A4-201ENST00000261707 URI1O94763 535 aaPredicted RBP12.65□□□□□ -0.38
SLC6A4-201ENST00000261707 MCM3P25205 808 aa12.65□□□□□ -0.38
SLC6A4-201ENST00000261707 BMS1Q14692 1282 aaKnown RBP12.65□□□□□ -0.38
SLC6A4-201ENST00000261707 JAKMIP3Q5VZ66 844 aa12.65□□□□□ -0.38
SLC6A4-201ENST00000261707 CLEC11AQ9Y240 323 aa12.65□□□□□ -0.38
SLC6A4-201ENST00000261707 JMYQ8N9B5 988 aa12.65□□□□□ -0.38
SLC6A4-201ENST00000261707 FSD1Q9BTV5 496 aa12.65□□□□□ -0.39
SLC6A4-201ENST00000261707 CCDC144AA2RUR9 1427 aa12.65□□□□□ -0.39
SLC6A4-201ENST00000261707 EPB41L2O43491 1005 aaKnown RBP12.64□□□□□ -0.39
SLC6A4-201ENST00000261707 EZRP15311 586 aaKnown RBP12.64□□□□□ -0.39
SLC6A4-201ENST00000261707 ARHGAP29Q52LW3 1261 aa12.64□□□□□ -0.39
SLC6A4-201ENST00000261707 C16orf45Q96MC5 204 aaPredicted RBP12.64□□□□□ -0.39
SLC6A4-201ENST00000261707 ADAMTS8Q9UP79 889 aa12.64□□□□□ -0.39
SLC6A4-201ENST00000261707 CYP46A1Q9Y6A2 500 aa12.64□□□□□ -0.39
SLC6A4-201ENST00000261707 KRT222Q8N1A0 295 aa12.64□□□□□ -0.39
SLC6A4-201ENST00000261707 LARP1BQ659C4 914 aaKnown RBP12.64□□□□□ -0.39
SLC6A4-201ENST00000261707 ZSCAN29Q8IWY8 852 aaPredicted RBP12.64□□□□□ -0.39
SLC6A4-201ENST00000261707 RFX1P22670 979 aa12.63□□□□□ -0.39
SLC6A4-201ENST00000261707 ATP2B1P20020 1258 aa12.63□□□□□ -0.39
SLC6A4-201ENST00000261707 CCDC183Q5T5S1 534 aa12.63□□□□□ -0.39
SLC6A4-201ENST00000261707 TXLNAP40222 546 aa12.63□□□□□ -0.39
SLC6A4-201ENST00000261707 STK3Q13188 491 aa12.63□□□□□ -0.39
SLC6A4-201ENST00000261707 WASHC4Q2M389 1173 aa12.63□□□□□ -0.39
SLC6A4-201ENST00000261707 CAMK4Q16566 473 aa12.63□□□□□ -0.39
SLC6A4-201ENST00000261707 CCDC88BA6NC98 1476 aa12.63□□□□□ -0.39
SLC6A4-201ENST00000261707 SFPQP23246 707 aaKnown RBP eCLIP12.63□□□□□ -0.39
SLC6A4-201ENST00000261707 KIAA1328Q86T90 577 aa12.63□□□□□ -0.39
SLC6A4-201ENST00000261707 CLIP2Q9UDT6 1046 aa12.63□□□□□ -0.39
SLC6A4-201ENST00000261707 ANKRD1Q15327 319 aa12.62□□□□□ -0.39
SLC6A4-201ENST00000261707 SYCP1Q15431 976 aa12.62□□□□□ -0.39
SLC6A4-201ENST00000261707 GPRASP1Q5JY77 1395 aa12.62□□□□□ -0.39
SLC6A4-201ENST00000261707 GBP2P32456 591 aaPredicted RBP12.62□□□□□ -0.39
SLC6A4-201ENST00000261707 ZNF710Q8N1W2 664 aa12.62□□□□□ -0.39
SLC6A4-201ENST00000261707 C1orf115Q9H7X2 142 aa12.62□□□□□ -0.39
SLC6A4-201ENST00000261707 HIP1O00291 1037 aa12.62□□□□□ -0.39
SLC6A4-201ENST00000261707 SMARCC1Q92922 1105 aaPredicted RBP12.62□□□□□ -0.39
SLC6A4-201ENST00000261707 WDR78Q5VTH9 848 aa12.62□□□□□ -0.39
SLC6A4-201ENST00000261707 RIC3Q7Z5B4 369 aa12.62□□□□□ -0.39
SLC6A4-201ENST00000261707 CCDC94Q9BW85 323 aaPredicted RBP12.62□□□□□ -0.39
SLC6A4-201ENST00000261707 UBTFL1P0CB47 393 aaPredicted RBP12.62□□□□□ -0.39
SLC6A4-201ENST00000261707 TOM1L2Q6ZVM7 507 aa12.62□□□□□ -0.39
SLC6A4-201ENST00000261707 BCAR3O75815 825 aa12.61□□□□□ -0.39
SLC6A4-201ENST00000261707 MINK1Q8N4C8 1332 aaPredicted RBP12.61□□□□□ -0.39
SLC6A4-201ENST00000261707 POTEB2H3BUK9 544 aa12.61□□□□□ -0.39
SLC6A4-201ENST00000261707 KIF5CO60282 957 aa12.61□□□□□ -0.39
SLC6A4-201ENST00000261707 NEBLO76041 1014 aa12.61□□□□□ -0.39
SLC6A4-201ENST00000261707 BEGAINQ9BUH8 593 aa12.61□□□□□ -0.39
SLC6A4-201ENST00000261707 USP25Q9UHP3 1055 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms