RNA–Protein interactions for RNA: ENST00000261318.4

C12orf49-201, Transcript of chromosome 12 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf49, Length 8,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-201ENST00000261318 TIAM1Q13009 1591 aa17.65■□□□□ 0.42
C12orf49-201ENST00000261318 SLC4A2P04920 1241 aa17.65■□□□□ 0.42
C12orf49-201ENST00000261318 LUC7LQ9NQ29 371 aaKnown RBP17.65■□□□□ 0.42
C12orf49-201ENST00000261318 ERBINQ96RT1 1412 aa17.65■□□□□ 0.42
C12orf49-201ENST00000261318 TAF3Q5VWG9 929 aa17.64■□□□□ 0.41
C12orf49-201ENST00000261318 FAM177A1Q8N128 213 aaPredicted RBP17.64■□□□□ 0.41
C12orf49-201ENST00000261318 SPATA32Q96LK8 384 aa17.64■□□□□ 0.41
C12orf49-201ENST00000261318 EFCAB5A4FU69 1503 aa17.64■□□□□ 0.41
C12orf49-201ENST00000261318 NUP62CLQ9H1M0 184 aa17.64■□□□□ 0.41
C12orf49-201ENST00000261318 RAD54L2Q9Y4B4 1467 aa17.63■□□□□ 0.41
C12orf49-201ENST00000261318 STIM1Q13586 685 aa17.63■□□□□ 0.41
C12orf49-201ENST00000261318 CCAR1Q8IX12 1150 aaKnown RBP17.63■□□□□ 0.41
C12orf49-201ENST00000261318 HECW1Q76N89 1606 aa17.62■□□□□ 0.41
C12orf49-201ENST00000261318 SLC3A2P08195 630 aaKnown RBP17.62■□□□□ 0.41
C12orf49-201ENST00000261318 PDIA4P13667 645 aaKnown RBP17.62■□□□□ 0.41
C12orf49-201ENST00000261318 TXLNBQ8N3L3 684 aa17.62■□□□□ 0.41
C12orf49-201ENST00000261318 SYCE3A1L190 88 aa17.62■□□□□ 0.41
C12orf49-201ENST00000261318 CCDC181Q5TID7 509 aa17.62■□□□□ 0.41
C12orf49-201ENST00000261318 PDCL2Q8N4E4 241 aa17.62■□□□□ 0.41
C12orf49-201ENST00000261318 PLEKHH2Q8IVE3 1493 aa17.62■□□□□ 0.41
C12orf49-201ENST00000261318 CFAP70Q5T0N1 1121 aa17.62■□□□□ 0.41
C12orf49-201ENST00000261318 MTMR7Q9Y216 660 aa17.62■□□□□ 0.41
C12orf49-201ENST00000261318 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.61■□□□□ 0.41
C12orf49-201ENST00000261318 NBPF1Q3BBV0 1214 aa17.61■□□□□ 0.41
C12orf49-201ENST00000261318 IQCEQ6IPM2 695 aa17.61■□□□□ 0.41
C12orf49-201ENST00000261318 DEF6Q9H4E7 631 aa17.61■□□□□ 0.41
C12orf49-201ENST00000261318 CEP57L1Q8IYX8 460 aa17.61■□□□□ 0.41
C12orf49-201ENST00000261318 TRIM22Q8IYM9 498 aa17.61■□□□□ 0.41
C12orf49-201ENST00000261318 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.61■□□□□ 0.41
C12orf49-201ENST00000261318 MAP4K4O95819 1239 aaPredicted RBP17.6■□□□□ 0.41
C12orf49-201ENST00000261318 NLRP6P59044 892 aa17.6■□□□□ 0.41
C12orf49-201ENST00000261318 SYCP1Q15431 976 aa17.6■□□□□ 0.41
C12orf49-201ENST00000261318 HSP90AB3PQ58FF7 597 aa17.6■□□□□ 0.41
C12orf49-201ENST00000261318 TTC39AQ5SRH9 613 aa17.6■□□□□ 0.41
C12orf49-201ENST00000261318 BLOC1S2Q6QNY1 142 aa17.6■□□□□ 0.41
C12orf49-201ENST00000261318 CCDC158Q5M9N0 1113 aa17.6■□□□□ 0.41
C12orf49-201ENST00000261318 MSH5O43196 834 aa17.6■□□□□ 0.41
C12orf49-201ENST00000261318 NUTM2GQ5VZR2 741 aa17.6■□□□□ 0.41
C12orf49-201ENST00000261318 ZSCAN31Q96LW9 406 aaPredicted RBP17.6■□□□□ 0.41
C12orf49-201ENST00000261318 PDRG1Q9NUG6 133 aa17.59■□□□□ 0.41
C12orf49-201ENST00000261318 GOLGA6L7A0A1B0GV03 622 aa17.59■□□□□ 0.41
C12orf49-201ENST00000261318 HDGFL1Q5TGJ6 251 aa17.59■□□□□ 0.41
C12orf49-201ENST00000261318 SYNJ1O43426 1573 aa17.59■□□□□ 0.41
C12orf49-201ENST00000261318 MAP3K11Q16584 847 aa17.59■□□□□ 0.41
C12orf49-201ENST00000261318 NBPF8Q3BBV2 869 aa17.59■□□□□ 0.41
C12orf49-201ENST00000261318 CCDC184Q52MB2 194 aa17.58■□□□□ 0.41
C12orf49-201ENST00000261318 UPF3BQ9BZI7 483 aaKnown RBP17.58■□□□□ 0.41
C12orf49-201ENST00000261318 C9orf84Q5VXU9 1444 aa17.58■□□□□ 0.4
C12orf49-201ENST00000261318 NLRP2Q9NX02 1062 aa17.58■□□□□ 0.4
C12orf49-201ENST00000261318 USP8P40818 1118 aa17.58■□□□□ 0.4
C12orf49-201ENST00000261318 KIF6Q6ZMV9 814 aa17.58■□□□□ 0.4
C12orf49-201ENST00000261318 ERICH4A6NGS2 130 aa17.58■□□□□ 0.4
C12orf49-201ENST00000261318 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
C12orf49-201ENST00000261318 SMTNL1A8MU46 457 aa17.57■□□□□ 0.4
C12orf49-201ENST00000261318 SAMD1Q6SPF0 538 aaPredicted RBP17.57■□□□□ 0.4
C12orf49-201ENST00000261318 FILIP1Q7Z7B0 1213 aa17.57■□□□□ 0.4
C12orf49-201ENST00000261318 JAKMIP1Q96N16 626 aaKnown RBP17.57■□□□□ 0.4
C12orf49-201ENST00000261318 PLEKHO1Q53GL0 409 aaPredicted RBP17.57■□□□□ 0.4
C12orf49-201ENST00000261318 KRT18P05783 430 aaKnown RBP17.56■□□□□ 0.4
C12orf49-201ENST00000261318 CDKL5O76039 1030 aa17.56■□□□□ 0.4
C12orf49-201ENST00000261318 CWC27Q6UX04 472 aaKnown RBP17.56■□□□□ 0.4
C12orf49-201ENST00000261318 ZNF428Q96B54 188 aa17.56■□□□□ 0.4
C12orf49-201ENST00000261318 SLC12A5Q9H2X9 1139 aa17.56■□□□□ 0.4
C12orf49-201ENST00000261318 CCDC69A6NI79 296 aa17.56■□□□□ 0.4
C12orf49-201ENST00000261318 KIF2AO00139 706 aaPredicted RBP17.56■□□□□ 0.4
C12orf49-201ENST00000261318 IKQ13123 557 aaPredicted RBP17.56■□□□□ 0.4
C12orf49-201ENST00000261318 ABTB2Q8N961 1025 aa17.56■□□□□ 0.4
C12orf49-201ENST00000261318 UBXN4Q92575 508 aa17.56■□□□□ 0.4
C12orf49-201ENST00000261318 PLCD4Q9BRC7 762 aa17.56■□□□□ 0.4
C12orf49-201ENST00000261318 CENPHQ9H3R5 247 aa17.56■□□□□ 0.4
C12orf49-201ENST00000261318 SLFN5Q08AF3 891 aa17.55■□□□□ 0.4
C12orf49-201ENST00000261318 NKTRP30414 1462 aaKnown RBP17.55■□□□□ 0.4
C12orf49-201ENST00000261318 ZRSR2Q15696 482 aaKnown RBP17.55■□□□□ 0.4
C12orf49-201ENST00000261318 NEFHP12036 1026 aa17.55■□□□□ 0.4
C12orf49-201ENST00000261318 SIL1Q9H173 461 aa17.55■□□□□ 0.4
C12orf49-201ENST00000261318 KRT32Q14532 448 aa17.55■□□□□ 0.4
C12orf49-201ENST00000261318 SULT6B1Q6IMI4 303 aa17.54■□□□□ 0.4
C12orf49-201ENST00000261318 CCDC102AQ96A19 550 aa17.54■□□□□ 0.4
C12orf49-201ENST00000261318 CASTP20810 708 aaKnown RBP17.54■□□□□ 0.4
C12orf49-201ENST00000261318 FAM193AP78312 1265 aa17.54■□□□□ 0.4
C12orf49-201ENST00000261318 POLA1P09884 1462 aaPredicted RBP17.54■□□□□ 0.4
C12orf49-201ENST00000261318 SEPT7Q16181 437 aaKnown RBP17.54■□□□□ 0.4
C12orf49-201ENST00000261318 CCDC183Q5T5S1 534 aa17.54■□□□□ 0.4
C12orf49-201ENST00000261318 PRAM1Q96QH2 718 aa17.54■□□□□ 0.4
C12orf49-201ENST00000261318 CNNM1Q9NRU3 951 aa17.54■□□□□ 0.4
C12orf49-201ENST00000261318 AACSQ86V21 672 aa17.53■□□□□ 0.4
C12orf49-201ENST00000261318 PTPN14Q15678 1187 aa17.53■□□□□ 0.4
C12orf49-201ENST00000261318 TMEM57Q8N5G2 664 aa17.53■□□□□ 0.4
C12orf49-201ENST00000261318 NACAP1Q9BZK3 213 aa17.53■□□□□ 0.4
C12orf49-201ENST00000261318 LRRFIP2Q9Y608 721 aaKnown RBP17.53■□□□□ 0.4
C12orf49-201ENST00000261318 ENOX2Q16206 610 aaKnown RBP17.52■□□□□ 0.4
C12orf49-201ENST00000261318 TMCO3Q6UWJ1 677 aa17.52■□□□□ 0.4
C12orf49-201ENST00000261318 SRGAP3O43295 1099 aa17.52■□□□□ 0.4
C12orf49-201ENST00000261318 EPB41L2O43491 1005 aaKnown RBP17.52■□□□□ 0.4
C12orf49-201ENST00000261318 SYNJ2O15056 1496 aa17.52■□□□□ 0.39
C12orf49-201ENST00000261318 TANGO6Q9C0B7 1094 aa17.52■□□□□ 0.39
C12orf49-201ENST00000261318 NOL7Q9UMY1 257 aaKnown RBP17.52■□□□□ 0.39
C12orf49-201ENST00000261318 CNKSR2Q8WXI2 1034 aa17.51■□□□□ 0.39
C12orf49-201ENST00000261318 GPRASP1Q5JY77 1395 aa17.51■□□□□ 0.39
C12orf49-201ENST00000261318 KIF18AQ8NI77 898 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms