RNA–Protein interactions for RNA: ENST00000254644.12

MRPL35-201, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MRPL35, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-201ENST00000254644 CD163L1Q9NR16 1453 aa18.61■□□□□ 0.57
MRPL35-201ENST00000254644 KCNH5Q8NCM2 988 aa18.61■□□□□ 0.57
MRPL35-201ENST00000254644 APBA3O96018 575 aa18.6■□□□□ 0.57
MRPL35-201ENST00000254644 RGPD3A6NKT7 1758 aaPredicted RBP18.6■□□□□ 0.57
MRPL35-201ENST00000254644 RGPD4Q7Z3J3 1758 aa18.6■□□□□ 0.57
MRPL35-201ENST00000254644 KTN1Q86UP2 1357 aaKnown RBP18.59■□□□□ 0.57
MRPL35-201ENST00000254644 WDR17Q8IZU2 1322 aa18.59■□□□□ 0.57
MRPL35-201ENST00000254644 ABCC6O95255 1503 aa18.59■□□□□ 0.57
MRPL35-201ENST00000254644 USP31Q70CQ4 1352 aa18.58■□□□□ 0.57
MRPL35-201ENST00000254644 C11orf95C9JLR9 678 aaPredicted RBP18.58■□□□□ 0.56
MRPL35-201ENST00000254644 R3HDM1Q15032 1099 aaKnown RBP18.57■□□□□ 0.56
MRPL35-201ENST00000254644 CARD11Q9BXL7 1154 aa18.57■□□□□ 0.56
MRPL35-201ENST00000254644 LTN1O94822 1766 aa18.57■□□□□ 0.56
MRPL35-201ENST00000254644 ZBTB7CA1YPR0 619 aa18.56■□□□□ 0.56
MRPL35-201ENST00000254644 TOM1L2Q6ZVM7 507 aa18.56■□□□□ 0.56
MRPL35-201ENST00000254644 OVOS2A0A0G2JMS6 1433 aa18.56■□□□□ 0.56
MRPL35-201ENST00000254644 OVOS2A0A0J9YW53 1432 aa18.56■□□□□ 0.56
MRPL35-201ENST00000254644 OVOS2Q6IE36 1432 aa18.56■□□□□ 0.56
MRPL35-201ENST00000254644 PUS7Q96PZ0 661 aaKnown RBP18.55■□□□□ 0.56
MRPL35-201ENST00000254644 BCL9O00512 1426 aa18.55■□□□□ 0.56
MRPL35-201ENST00000254644 DDB1Q16531 1140 aa18.54■□□□□ 0.56
MRPL35-201ENST00000254644 CARD10Q9BWT7 1032 aa18.54■□□□□ 0.56
MRPL35-201ENST00000254644 CDCA7Q9BWT1 371 aaPredicted RBP18.53■□□□□ 0.56
MRPL35-201ENST00000254644 TONSLQ96HA7 1378 aa18.53■□□□□ 0.56
MRPL35-201ENST00000254644 PLSCR1O15162 318 aa18.51■□□□□ 0.55
MRPL35-201ENST00000254644 MARCH10Q8NA82 808 aaPredicted RBP18.51■□□□□ 0.55
MRPL35-201ENST00000254644 SLC12A5Q9H2X9 1139 aa18.51■□□□□ 0.55
MRPL35-201ENST00000254644 TESK2Q96S53 571 aa18.5■□□□□ 0.55
MRPL35-201ENST00000254644 EDC4Q6P2E9 1401 aaKnown RBP18.49■□□□□ 0.55
MRPL35-201ENST00000254644 SOX12O15370 315 aa18.49■□□□□ 0.55
MRPL35-201ENST00000254644 NME9Q86XW9 330 aa18.49■□□□□ 0.55
MRPL35-201ENST00000254644 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.49■□□□□ 0.55
MRPL35-201ENST00000254644 CCDC7Q96M83 1385 aa18.49■□□□□ 0.55
MRPL35-201ENST00000254644 A0A1W2PP64 1363 aa18.48■□□□□ 0.55
MRPL35-201ENST00000254644 PTF1AQ7RTS3 328 aa18.48■□□□□ 0.55
MRPL35-201ENST00000254644 BCL11BQ9C0K0 894 aaPredicted RBP18.48■□□□□ 0.55
MRPL35-201ENST00000254644 NBPF14Q5TI25 921 aa18.47■□□□□ 0.55
MRPL35-201ENST00000254644 HDGFL2Q7Z4V5 671 aaPredicted RBP18.47■□□□□ 0.55
MRPL35-201ENST00000254644 TMC1Q8TDI8 760 aa18.47■□□□□ 0.55
MRPL35-201ENST00000254644 ERBB3P21860 1342 aa18.47■□□□□ 0.55
MRPL35-201ENST00000254644 KAT6BQ8WYB5 2073 aa18.45■□□□□ 0.54
MRPL35-201ENST00000254644 CSB-PGBD3P0DP91 1061 aa18.45■□□□□ 0.54
MRPL35-201ENST00000254644 PROM2Q8N271 834 aa18.45■□□□□ 0.54
MRPL35-201ENST00000254644 TERF2IPQ9NYB0 399 aa18.45■□□□□ 0.54
MRPL35-201ENST00000254644 NINLQ9Y2I6 1382 aa18.44■□□□□ 0.54
MRPL35-201ENST00000254644 TNS2Q63HR2 1409 aa18.44■□□□□ 0.54
MRPL35-201ENST00000254644 ST20-MTHFSA0A0A6YYL1 179 aa18.44■□□□□ 0.54
MRPL35-201ENST00000254644 EXOC5O00471 708 aa18.44■□□□□ 0.54
MRPL35-201ENST00000254644 CASZ1Q86V15 1759 aa18.44■□□□□ 0.54
MRPL35-201ENST00000254644 NHSQ6T4R5 1651 aa18.43■□□□□ 0.54
MRPL35-201ENST00000254644 FAM208AQ9UK61 1670 aaKnown RBP18.42■□□□□ 0.54
MRPL35-201ENST00000254644 SLC24A1O60721 1099 aa18.42■□□□□ 0.54
MRPL35-201ENST00000254644 TRIM26Q12899 539 aaPredicted RBP18.42■□□□□ 0.54
MRPL35-201ENST00000254644 ANKRD24Q8TF21 1146 aa18.39■□□□□ 0.53
MRPL35-201ENST00000254644 ANO8Q9HCE9 1232 aaPredicted RBP18.39■□□□□ 0.53
MRPL35-201ENST00000254644 RGPD2P0DJD1 1756 aa18.39■□□□□ 0.53
MRPL35-201ENST00000254644 BTAF1O14981 1849 aa18.38■□□□□ 0.53
MRPL35-201ENST00000254644 IL2RBP14784 551 aa18.38■□□□□ 0.53
MRPL35-201ENST00000254644 IP6K1Q92551 441 aa18.38■□□□□ 0.53
MRPL35-201ENST00000254644 NLRP2Q9NX02 1062 aa18.38■□□□□ 0.53
MRPL35-201ENST00000254644 KCNQ2O43526 872 aa18.37■□□□□ 0.53
MRPL35-201ENST00000254644 TXNRD1Q16881 649 aa18.36■□□□□ 0.53
MRPL35-201ENST00000254644 ANKRD36BQ8N2N9 1353 aa18.36■□□□□ 0.53
MRPL35-201ENST00000254644 SPON1Q9HCB6 807 aa18.36■□□□□ 0.53
MRPL35-201ENST00000254644 SHANK3Q9BYB0 1731 aa18.34■□□□□ 0.53
MRPL35-201ENST00000254644 COG3Q96JB2 828 aa18.33■□□□□ 0.52
MRPL35-201ENST00000254644 PDGFDQ9GZP0 370 aaPredicted RBP18.33■□□□□ 0.52
MRPL35-201ENST00000254644 PAPPAQ13219 1627 aa18.33■□□□□ 0.52
MRPL35-201ENST00000254644 USP47Q96K76 1375 aa18.32■□□□□ 0.52
MRPL35-201ENST00000254644 MAP3K19Q56UN5 1328 aa18.32■□□□□ 0.52
MRPL35-201ENST00000254644 KIF20BQ96Q89 1820 aa18.31■□□□□ 0.52
MRPL35-201ENST00000254644 FBLN1P23142 703 aa18.31■□□□□ 0.52
MRPL35-201ENST00000254644 HOXC9P31274 260 aa18.31■□□□□ 0.52
MRPL35-201ENST00000254644 TMF1P82094 1093 aa18.31■□□□□ 0.52
MRPL35-201ENST00000254644 FYB1O15117 783 aa18.3■□□□□ 0.52
MRPL35-201ENST00000254644 SLC15A2Q16348 729 aa18.3■□□□□ 0.52
MRPL35-201ENST00000254644 ACSBG1Q96GR2 724 aa18.3■□□□□ 0.52
MRPL35-201ENST00000254644 MYOM1P52179 1685 aa18.29■□□□□ 0.52
MRPL35-201ENST00000254644 TIMELESSQ9UNS1 1208 aa18.28■□□□□ 0.52
MRPL35-201ENST00000254644 QSER1Q2KHR3 1735 aa18.28■□□□□ 0.52
MRPL35-201ENST00000254644 RTL1A6NKG5 1358 aa18.28■□□□□ 0.52
MRPL35-201ENST00000254644 PTGER2P43116 358 aa18.27■□□□□ 0.52
MRPL35-201ENST00000254644 LTV1Q96GA3 475 aaPredicted RBP18.27■□□□□ 0.52
MRPL35-201ENST00000254644 STK32BQ9NY57 414 aa18.27■□□□□ 0.52
MRPL35-201ENST00000254644 LY75O60449 1722 aa18.26■□□□□ 0.51
MRPL35-201ENST00000254644 AMPHP49418 695 aa18.26■□□□□ 0.51
MRPL35-201ENST00000254644 DOT1LQ8TEK3 1739 aa18.26■□□□□ 0.51
MRPL35-201ENST00000254644 PPP1R1BQ9UD71 204 aaPredicted RBP18.25■□□□□ 0.51
MRPL35-201ENST00000254644 MEGF6O75095 1541 aa18.24■□□□□ 0.51
MRPL35-201ENST00000254644 COL24A1Q17RW2 1714 aa18.24■□□□□ 0.51
MRPL35-201ENST00000254644 CDCA8Q53HL2 280 aa18.24■□□□□ 0.51
MRPL35-201ENST00000254644 SGIP1Q9BQI5 828 aa18.24■□□□□ 0.51
MRPL35-201ENST00000254644 GGNBP2Q9H3C7 697 aa18.24■□□□□ 0.51
MRPL35-201ENST00000254644 LRRC4BQ9NT99 713 aa18.24■□□□□ 0.51
MRPL35-201ENST00000254644 ZBTB7AO95365 584 aa18.23■□□□□ 0.51
MRPL35-201ENST00000254644 RRS1Q15050 365 aaKnown RBP18.23■□□□□ 0.51
MRPL35-201ENST00000254644 CLSPNQ9HAW4 1339 aa18.23■□□□□ 0.51
MRPL35-201ENST00000254644 KIF24Q5T7B8 1368 aa18.22■□□□□ 0.51
MRPL35-201ENST00000254644 MAP2P11137 1827 aaKnown RBP18.22■□□□□ 0.51
MRPL35-201ENST00000254644 TUBGCP6Q96RT7 1819 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms