RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.88□□□□□ -0.03
CLUHP3-201ENST00000254109 SHPRHQ149N8 1683 aa14.87□□□□□ -0.03
CLUHP3-201ENST00000254109 MED1Q15648 1581 aaPredicted RBP14.87□□□□□ -0.03
CLUHP3-201ENST00000254109 RUNDC1Q96C34 613 aa14.87□□□□□ -0.03
CLUHP3-201ENST00000254109 AATKQ6ZMQ8 1374 aa14.87□□□□□ -0.03
CLUHP3-201ENST00000254109 PLIN1O60240 522 aa14.87□□□□□ -0.03
CLUHP3-201ENST00000254109 TRMT2AQ8IZ69 625 aaKnown RBP14.87□□□□□ -0.03
CLUHP3-201ENST00000254109 USP19O94966 1318 aa14.86□□□□□ -0.03
CLUHP3-201ENST00000254109 ARHGEF10O15013 1369 aa14.86□□□□□ -0.03
CLUHP3-201ENST00000254109 GCP02774 474 aa14.86□□□□□ -0.03
CLUHP3-201ENST00000254109 COL16A1Q07092 1604 aaPredicted RBP14.86□□□□□ -0.03
CLUHP3-201ENST00000254109 LRRC59Q96AG4 307 aaKnown RBP14.85□□□□□ -0.03
CLUHP3-201ENST00000254109 MAP3K19Q56UN5 1328 aa14.85□□□□□ -0.03
CLUHP3-201ENST00000254109 SLIT3O75094 1523 aa14.85□□□□□ -0.03
CLUHP3-201ENST00000254109 FANCIQ9NVI1 1328 aa14.84□□□□□ -0.03
CLUHP3-201ENST00000254109 NFAT5O94916 1531 aa14.84□□□□□ -0.03
CLUHP3-201ENST00000254109 CRYBG1Q9Y4K1 1723 aa14.84□□□□□ -0.03
CLUHP3-201ENST00000254109 ZBTB7CA1YPR0 619 aa14.84□□□□□ -0.03
CLUHP3-201ENST00000254109 CRBNQ96SW2 442 aa14.84□□□□□ -0.03
CLUHP3-201ENST00000254109 PEAK1Q9H792 1746 aa14.84□□□□□ -0.03
CLUHP3-201ENST00000254109 PHRF1Q9P1Y6 1649 aaKnown RBP14.83□□□□□ -0.03
CLUHP3-201ENST00000254109 ZC3H6P61129 1189 aaKnown RBP14.83□□□□□ -0.04
CLUHP3-201ENST00000254109 KCNH5Q8NCM2 988 aa14.83□□□□□ -0.04
CLUHP3-201ENST00000254109 LTN1O94822 1766 aa14.82□□□□□ -0.04
CLUHP3-201ENST00000254109 WWC1Q8IX03 1113 aa14.82□□□□□ -0.04
CLUHP3-201ENST00000254109 AMPHP49418 695 aa14.81□□□□□ -0.04
CLUHP3-201ENST00000254109 PNPLA6Q8IY17 1366 aa14.81□□□□□ -0.04
CLUHP3-201ENST00000254109 HSP90AB2PQ58FF8 381 aa14.8□□□□□ -0.04
CLUHP3-201ENST00000254109 TCP11L2Q8N4U5 519 aa14.8□□□□□ -0.04
CLUHP3-201ENST00000254109 SPINK5Q9NQ38 1064 aaPredicted RBP14.8□□□□□ -0.04
CLUHP3-201ENST00000254109 ABCA3Q99758 1704 aa14.8□□□□□ -0.04
CLUHP3-201ENST00000254109 U2AF1L5P0DN76 240 aaPredicted RBP14.8□□□□□ -0.04
CLUHP3-201ENST00000254109 HAP1P54257 671 aaPredicted RBP14.8□□□□□ -0.04
CLUHP3-201ENST00000254109 U2AF1Q01081 240 aaKnown RBP eCLIP14.8□□□□□ -0.04
CLUHP3-201ENST00000254109 NCBP3Q53F19 620 aaKnown RBP14.8□□□□□ -0.04
CLUHP3-201ENST00000254109 ARHGEF25Q86VW2 580 aa14.8□□□□□ -0.04
CLUHP3-201ENST00000254109 COL3A1P02461 1466 aaPredicted RBP14.8□□□□□ -0.04
CLUHP3-201ENST00000254109 HOXC9P31274 260 aa14.79□□□□□ -0.04
CLUHP3-201ENST00000254109 HSPA1LP34931 641 aa14.79□□□□□ -0.04
CLUHP3-201ENST00000254109 CDK12Q9NYV4 1490 aaPredicted RBP14.79□□□□□ -0.04
CLUHP3-201ENST00000254109 NEUROD2Q15784 382 aa14.78□□□□□ -0.04
CLUHP3-201ENST00000254109 CHRNA2Q15822 529 aa14.78□□□□□ -0.04
CLUHP3-201ENST00000254109 CCDC27Q2M243 656 aa14.78□□□□□ -0.04
CLUHP3-201ENST00000254109 WDR63Q8IWG1 891 aa14.78□□□□□ -0.04
CLUHP3-201ENST00000254109 C20orf194Q5TEA3 1177 aa14.78□□□□□ -0.04
CLUHP3-201ENST00000254109 COL22A1Q8NFW1 1626 aaPredicted RBP14.77□□□□□ -0.04
CLUHP3-201ENST00000254109 FLT4P35916 1363 aa14.77□□□□□ -0.04
CLUHP3-201ENST00000254109 KIAA0232Q92628 1395 aa14.77□□□□□ -0.04
CLUHP3-201ENST00000254109 TCERG1O14776 1098 aaKnown RBP14.77□□□□□ -0.05
CLUHP3-201ENST00000254109 DIAPH1O60610 1272 aaKnown RBP14.77□□□□□ -0.05
CLUHP3-201ENST00000254109 RRP7AQ9Y3A4 280 aaKnown RBP14.77□□□□□ -0.05
CLUHP3-201ENST00000254109 RGPD5Q99666 1765 aa14.77□□□□□ -0.05
CLUHP3-201ENST00000254109 IL13P35225 146 aa14.76□□□□□ -0.05
CLUHP3-201ENST00000254109 MYT1Q01538 1121 aa14.76□□□□□ -0.05
CLUHP3-201ENST00000254109 EIF4A2Q14240 407 aaKnown RBP14.76□□□□□ -0.05
CLUHP3-201ENST00000254109 IP6K1Q92551 441 aa14.76□□□□□ -0.05
CLUHP3-201ENST00000254109 LTV1Q96GA3 475 aaPredicted RBP14.76□□□□□ -0.05
CLUHP3-201ENST00000254109 AXIN2Q9Y2T1 843 aa14.76□□□□□ -0.05
CLUHP3-201ENST00000254109 NUTM2BA6NNL0 878 aaPredicted RBP14.76□□□□□ -0.05
CLUHP3-201ENST00000254109 NUTM2EB1AL46 878 aaPredicted RBP14.76□□□□□ -0.05
CLUHP3-201ENST00000254109 U2SURPO15042 1029 aaKnown RBP14.76□□□□□ -0.05
CLUHP3-201ENST00000254109 NUTM2AQ8IVF1 878 aaPredicted RBP14.76□□□□□ -0.05
CLUHP3-201ENST00000254109 PHF23Q9BUL5 403 aaPredicted RBP14.76□□□□□ -0.05
CLUHP3-201ENST00000254109 PNNQ9H307 717 aaKnown RBP14.76□□□□□ -0.05
CLUHP3-201ENST00000254109 COL18A1P39060 1754 aa14.74□□□□□ -0.05
CLUHP3-201ENST00000254109 RTL1A6NKG5 1358 aa14.74□□□□□ -0.05
CLUHP3-201ENST00000254109 PRDM11Q9NQV5 511 aa14.73□□□□□ -0.05
CLUHP3-201ENST00000254109 CPDO75976 1380 aa14.73□□□□□ -0.05
CLUHP3-201ENST00000254109 KIF24Q5T7B8 1368 aa14.73□□□□□ -0.05
CLUHP3-201ENST00000254109 JCADQ9P266 1359 aa14.73□□□□□ -0.05
CLUHP3-201ENST00000254109 MAPK8IP3Q9UPT6 1336 aa14.73□□□□□ -0.05
CLUHP3-201ENST00000254109 FAM83GA6ND36 823 aa14.73□□□□□ -0.05
CLUHP3-201ENST00000254109 BCAR3O75815 825 aa14.73□□□□□ -0.05
CLUHP3-201ENST00000254109 MYH16Q9H6N6 1097 aa14.73□□□□□ -0.05
CLUHP3-201ENST00000254109 ADAMTS2O95450 1211 aa14.72□□□□□ -0.05
CLUHP3-201ENST00000254109 MS4A1P11836 297 aa14.72□□□□□ -0.05
CLUHP3-201ENST00000254109 CANXP27824 592 aaKnown RBP14.72□□□□□ -0.05
CLUHP3-201ENST00000254109 CENPQQ7L2Z9 268 aaPredicted RBP14.71□□□□□ -0.05
CLUHP3-201ENST00000254109 ANP32EQ9BTT0 268 aa14.71□□□□□ -0.05
CLUHP3-201ENST00000254109 RGPD2P0DJD1 1756 aa14.71□□□□□ -0.05
CLUHP3-201ENST00000254109 HMOX1P09601 288 aa14.71□□□□□ -0.06
CLUHP3-201ENST00000254109 ANKRD24Q8TF21 1146 aa14.71□□□□□ -0.06
CLUHP3-201ENST00000254109 PDE3AQ14432 1141 aa14.7□□□□□ -0.06
CLUHP3-201ENST00000254109 PLEKHF1Q96S99 279 aa14.7□□□□□ -0.06
CLUHP3-201ENST00000254109 EYA1Q99502 592 aa14.7□□□□□ -0.06
CLUHP3-201ENST00000254109 CAMTA1Q9Y6Y1 1673 aa14.69□□□□□ -0.06
CLUHP3-201ENST00000254109 ERICH6Q7L0X2 663 aa14.69□□□□□ -0.06
CLUHP3-201ENST00000254109 AEBP1Q8IUX7 1158 aa14.69□□□□□ -0.06
CLUHP3-201ENST00000254109 USHBP1Q8N6Y0 703 aa14.69□□□□□ -0.06
CLUHP3-201ENST00000254109 LMO7Q8WWI1 1683 aa14.68□□□□□ -0.06
CLUHP3-201ENST00000254109 RGPD1P0DJD0 1748 aa14.68□□□□□ -0.06
CLUHP3-201ENST00000254109 NEFMP07197 916 aa14.68□□□□□ -0.06
CLUHP3-201ENST00000254109 TMPOP42166 694 aaKnown RBP14.68□□□□□ -0.06
CLUHP3-201ENST00000254109 NBPF6Q5VWK0 638 aa14.68□□□□□ -0.06
CLUHP3-201ENST00000254109 SULT6B1Q6IMI4 303 aa14.68□□□□□ -0.06
CLUHP3-201ENST00000254109 NBPF4Q96M43 638 aa14.68□□□□□ -0.06
CLUHP3-201ENST00000254109 ERBB3P21860 1342 aa14.68□□□□□ -0.06
CLUHP3-201ENST00000254109 KDM2BQ8NHM5 1336 aa14.68□□□□□ -0.06
CLUHP3-201ENST00000254109 MSH5O43196 834 aa14.67□□□□□ -0.06
CLUHP3-201ENST00000254109 ANP32AP39687 249 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms