RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 KRT28Q7Z3Y7 464 aa18.22■□□□□ 0.51
UBE4B-201ENST00000253251 TESK2Q96S53 571 aa18.22■□□□□ 0.51
UBE4B-201ENST00000253251 MYO5CQ9NQX4 1742 aa18.22■□□□□ 0.51
UBE4B-201ENST00000253251 FOXO3O43524 673 aa18.22■□□□□ 0.51
UBE4B-201ENST00000253251 NEUROD6Q96NK8 337 aa18.22■□□□□ 0.51
UBE4B-201ENST00000253251 DRC7Q8IY82 874 aa18.22■□□□□ 0.51
UBE4B-201ENST00000253251 RBM33Q96EV2 1170 aaKnown RBP18.22■□□□□ 0.51
UBE4B-201ENST00000253251 GOLGA6L3A6NEY3 463 aa18.22■□□□□ 0.51
UBE4B-201ENST00000253251 XPCQ01831 940 aaPredicted RBP18.22■□□□□ 0.51
UBE4B-201ENST00000253251 CHAF1AQ13111 956 aaPredicted RBP18.22■□□□□ 0.51
UBE4B-201ENST00000253251 DDX54Q8TDD1 881 aaKnown RBP18.22■□□□□ 0.51
UBE4B-201ENST00000253251 PARD3Q8TEW0 1356 aa18.22■□□□□ 0.51
UBE4B-201ENST00000253251 SF3A1Q15459 793 aaKnown RBP18.21■□□□□ 0.51
UBE4B-201ENST00000253251 NUCB2P80303 420 aa18.2■□□□□ 0.5
UBE4B-201ENST00000253251 MSH6P52701 1360 aa18.2■□□□□ 0.5
UBE4B-201ENST00000253251 PSMA5P28066 241 aa18.2■□□□□ 0.5
UBE4B-201ENST00000253251 POLR3AO14802 1390 aaPredicted RBP18.2■□□□□ 0.5
UBE4B-201ENST00000253251 PPIP5K1Q6PFW1 1433 aa18.2■□□□□ 0.5
UBE4B-201ENST00000253251 RARSP54136 660 aaKnown RBP18.19■□□□□ 0.5
UBE4B-201ENST00000253251 DUSP27Q5VZP5 1158 aa18.19■□□□□ 0.5
UBE4B-201ENST00000253251 LRRCC1Q9C099 1032 aa18.19■□□□□ 0.5
UBE4B-201ENST00000253251 APPP05067 770 aa18.19■□□□□ 0.5
UBE4B-201ENST00000253251 MCM2P49736 904 aa18.19■□□□□ 0.5
UBE4B-201ENST00000253251 FOXD4L1Q9NU39 408 aa18.19■□□□□ 0.5
UBE4B-201ENST00000253251 DEKP35659 375 aaKnown RBP18.19■□□□□ 0.5
UBE4B-201ENST00000253251 MBD5Q9P267 1494 aa18.19■□□□□ 0.5
UBE4B-201ENST00000253251 TBC1D2BQ9UPU7 963 aa18.18■□□□□ 0.5
UBE4B-201ENST00000253251 FYB1O15117 783 aa18.18■□□□□ 0.5
UBE4B-201ENST00000253251 TRPM2O94759 1503 aa18.18■□□□□ 0.5
UBE4B-201ENST00000253251 YTHDC2Q9H6S0 1430 aaKnown RBP18.18■□□□□ 0.5
UBE4B-201ENST00000253251 NPC1L1Q9UHC9 1359 aa18.18■□□□□ 0.5
UBE4B-201ENST00000253251 FSD1Q9BTV5 496 aa18.17■□□□□ 0.5
UBE4B-201ENST00000253251 ZFYVE9O95405 1425 aa18.17■□□□□ 0.5
UBE4B-201ENST00000253251 CPLX1O14810 134 aa18.17■□□□□ 0.5
UBE4B-201ENST00000253251 STARD3NLO95772 234 aa18.17■□□□□ 0.5
UBE4B-201ENST00000253251 TRIM29Q14134 588 aa18.17■□□□□ 0.5
UBE4B-201ENST00000253251 ZFYVE16Q7Z3T8 1539 aa18.17■□□□□ 0.5
UBE4B-201ENST00000253251 PIK3C2GO75747 1445 aa18.17■□□□□ 0.5
UBE4B-201ENST00000253251 KIAA2012Q0VF49 1180 aa18.17■□□□□ 0.5
UBE4B-201ENST00000253251 NPHP3Q7Z494 1330 aa18.16■□□□□ 0.5
UBE4B-201ENST00000253251 COL17A1Q9UMD9 1497 aaPredicted RBP18.16■□□□□ 0.5
UBE4B-201ENST00000253251 CCDC27Q2M243 656 aa18.16■□□□□ 0.5
UBE4B-201ENST00000253251 ERICH2A1L162 156 aa18.16■□□□□ 0.5
UBE4B-201ENST00000253251 RALYLQ86SE5 291 aaKnown RBP18.15■□□□□ 0.5
UBE4B-201ENST00000253251 GZF1Q9H116 711 aaPredicted RBP18.15■□□□□ 0.5
UBE4B-201ENST00000253251 NUTM2BA6NNL0 878 aaPredicted RBP18.15■□□□□ 0.5
UBE4B-201ENST00000253251 NUTM2EB1AL46 878 aaPredicted RBP18.15■□□□□ 0.5
UBE4B-201ENST00000253251 NUTM2AQ8IVF1 878 aaPredicted RBP18.15■□□□□ 0.5
UBE4B-201ENST00000253251 PTPRCP08575 1304 aa18.15■□□□□ 0.5
UBE4B-201ENST00000253251 MCM10Q7L590 875 aa18.14■□□□□ 0.5
UBE4B-201ENST00000253251 CCDC158Q5M9N0 1113 aa18.14■□□□□ 0.49
UBE4B-201ENST00000253251 LARP1Q6PKG0 1096 aaKnown RBP18.14■□□□□ 0.49
UBE4B-201ENST00000253251 TRIM34Q9BYJ4 488 aa18.14■□□□□ 0.49
UBE4B-201ENST00000253251 MAGI2Q86UL8 1455 aa18.14■□□□□ 0.49
UBE4B-201ENST00000253251 ABCC1P33527 1531 aa18.14■□□□□ 0.49
UBE4B-201ENST00000253251 RABEP1Q15276 862 aa18.14■□□□□ 0.49
UBE4B-201ENST00000253251 CHD1LQ86WJ1 897 aa18.14■□□□□ 0.49
UBE4B-201ENST00000253251 SSH1Q8WYL5 1049 aa18.14■□□□□ 0.49
UBE4B-201ENST00000253251 GNL3LQ9NVN8 582 aaKnown RBP18.14■□□□□ 0.49
UBE4B-201ENST00000253251 WASHC4Q2M389 1173 aa18.13■□□□□ 0.49
UBE4B-201ENST00000253251 RASSF8Q8NHQ8 419 aa18.13■□□□□ 0.49
UBE4B-201ENST00000253251 NPATQ14207 1427 aa18.13■□□□□ 0.49
UBE4B-201ENST00000253251 SMC3Q9UQE7 1217 aa18.13■□□□□ 0.49
UBE4B-201ENST00000253251 TMEM57Q8N5G2 664 aa18.13■□□□□ 0.49
UBE4B-201ENST00000253251 C1orf115Q9H7X2 142 aa18.13■□□□□ 0.49
UBE4B-201ENST00000253251 DDX49Q9Y6V7 483 aaKnown RBP18.13■□□□□ 0.49
UBE4B-201ENST00000253251 TMOD3Q9NYL9 352 aa18.12■□□□□ 0.49
UBE4B-201ENST00000253251 MLH3Q9UHC1 1453 aa18.11■□□□□ 0.49
UBE4B-201ENST00000253251 RAB11FIP3O75154 756 aa18.11■□□□□ 0.49
UBE4B-201ENST00000253251 CCDC57Q2TAC2 916 aa18.11■□□□□ 0.49
UBE4B-201ENST00000253251 IFNL2Q8IZJ0 200 aa18.11■□□□□ 0.49
UBE4B-201ENST00000253251 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.11■□□□□ 0.491e-6■■■□□ 18.9
UBE4B-201ENST00000253251 C19orf44Q9H6X5 657 aa18.11■□□□□ 0.49
UBE4B-201ENST00000253251 CNNM1Q9NRU3 951 aa18.11■□□□□ 0.49
UBE4B-201ENST00000253251 HYPKQ9NX55 129 aa18.11■□□□□ 0.49
UBE4B-201ENST00000253251 TULP1O00294 542 aaPredicted RBP18.1■□□□□ 0.49
UBE4B-201ENST00000253251 TEX13AQ9BXU3 409 aaPredicted RBP18.1■□□□□ 0.49
UBE4B-201ENST00000253251 DBF4Q9UBU7 674 aaPredicted RBP18.1■□□□□ 0.49
UBE4B-201ENST00000253251 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.1■□□□□ 0.49
UBE4B-201ENST00000253251 CHD1O14646 1710 aa18.1■□□□□ 0.49
UBE4B-201ENST00000253251 SRGAP3O43295 1099 aa18.1■□□□□ 0.49
UBE4B-201ENST00000253251 MYL6BP14649 208 aa18.1■□□□□ 0.49
UBE4B-201ENST00000253251 SIRT1Q96EB6 747 aa18.1■□□□□ 0.49
UBE4B-201ENST00000253251 THUMPD2Q9BTF0 503 aaKnown RBP18.1■□□□□ 0.49
UBE4B-201ENST00000253251 MARCH6O60337 910 aa18.09■□□□□ 0.49
UBE4B-201ENST00000253251 ZSCAN25Q6NSZ9 544 aa18.09■□□□□ 0.49
UBE4B-201ENST00000253251 HSP90AB3PQ58FF7 597 aa18.08■□□□□ 0.49
UBE4B-201ENST00000253251 ARHGAP45Q92619 1136 aa18.08■□□□□ 0.49
UBE4B-201ENST00000253251 FLT4P35916 1363 aa18.08■□□□□ 0.49
UBE4B-201ENST00000253251 KDM5DQ9BY66 1539 aa18.08■□□□□ 0.48
UBE4B-201ENST00000253251 PREX2Q70Z35 1606 aa18.08■□□□□ 0.48
UBE4B-201ENST00000253251 NFXL1Q6ZNB6 911 aa18.08■□□□□ 0.48
UBE4B-201ENST00000253251 FMNL2Q96PY5 1086 aa18.08■□□□□ 0.48
UBE4B-201ENST00000253251 SAMD9LQ8IVG5 1584 aa18.07■□□□□ 0.48
UBE4B-201ENST00000253251 PIP4K2BP78356 416 aa18.07■□□□□ 0.48
UBE4B-201ENST00000253251 ANKRD24Q8TF21 1146 aa18.07■□□□□ 0.48
UBE4B-201ENST00000253251 BACH2Q9BYV9 841 aa18.07■□□□□ 0.48
UBE4B-201ENST00000253251 TTC39AQ5SRH9 613 aa18.07■□□□□ 0.48
UBE4B-201ENST00000253251 CEP126Q9P2H0 1117 aa18.07■□□□□ 0.48
UBE4B-201ENST00000253251 SLC4A3P48751 1232 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms