RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 FAM98CQ17RN3 349 aaKnown RBP33.67■■■□□ 2.98
SDF2L1-201ENST00000248958 LARP1Q6PKG0 1096 aaKnown RBP33.66■■■□□ 2.98
SDF2L1-201ENST00000248958 RGPD5Q99666 1765 aa33.66■■■□□ 2.98
SDF2L1-201ENST00000248958 NSD3Q9BZ95 1437 aa33.65■■■□□ 2.98
SDF2L1-201ENST00000248958 UPF1Q92900 1129 aaKnown RBP eCLIP33.65■■■□□ 2.98
SDF2L1-201ENST00000248958 CARD14Q9BXL6 1004 aa33.65■■■□□ 2.98
SDF2L1-201ENST00000248958 THRAP3Q9Y2W1 955 aaKnown RBP33.65■■■□□ 2.98
SDF2L1-201ENST00000248958 CRB1P82279 1406 aa33.64■■■□□ 2.98
SDF2L1-201ENST00000248958 AXIN2Q9Y2T1 843 aa33.64■■■□□ 2.98
SDF2L1-201ENST00000248958 A0A0G2JS52 829 aa33.63■■■□□ 2.97
SDF2L1-201ENST00000248958 MYT1Q01538 1121 aa33.63■■■□□ 2.97
SDF2L1-201ENST00000248958 BARGINQ6ZT62 677 aa33.63■■■□□ 2.97
SDF2L1-201ENST00000248958 THSD7AQ9UPZ6 1657 aa33.62■■■□□ 2.97
SDF2L1-201ENST00000248958 WDR17Q8IZU2 1322 aa33.61■■■□□ 2.97
SDF2L1-201ENST00000248958 TCP11L2Q8N4U5 519 aa33.61■■■□□ 2.97
SDF2L1-201ENST00000248958 GGNBP2Q9H3C7 697 aa33.61■■■□□ 2.97
SDF2L1-201ENST00000248958 C11orf95C9JLR9 678 aaPredicted RBP33.6■■■□□ 2.97
SDF2L1-201ENST00000248958 USP35Q9P2H5 1018 aa33.59■■■□□ 2.97
SDF2L1-201ENST00000248958 CGNL1Q0VF96 1302 aa33.58■■■□□ 2.97
SDF2L1-201ENST00000248958 TOM1L2Q6ZVM7 507 aa33.58■■■□□ 2.97
SDF2L1-201ENST00000248958 KRT27Q7Z3Y8 459 aa33.58■■■□□ 2.97
SDF2L1-201ENST00000248958 CSB-PGBD3P0DP91 1061 aa33.56■■■□□ 2.96
SDF2L1-201ENST00000248958 BLMP54132 1417 aaPredicted RBP33.55■■■□□ 2.96
SDF2L1-201ENST00000248958 PANK3Q9H999 370 aa33.55■■■□□ 2.96
SDF2L1-201ENST00000248958 KIF7Q2M1P5 1343 aa33.54■■■□□ 2.96
SDF2L1-201ENST00000248958 IP6K1Q92551 441 aa33.53■■■□□ 2.96
SDF2L1-201ENST00000248958 CARD10Q9BWT7 1032 aa33.51■■■□□ 2.95
SDF2L1-201ENST00000248958 ERBB3P21860 1342 aa33.51■■■□□ 2.95
SDF2L1-201ENST00000248958 MAP3K19Q56UN5 1328 aa33.51■■■□□ 2.95
SDF2L1-201ENST00000248958 CCDC125Q86Z20 511 aa33.5■■■□□ 2.95
SDF2L1-201ENST00000248958 ANKRD26Q9UPS8 1709 aa33.5■■■□□ 2.95
SDF2L1-201ENST00000248958 PARP4Q9UKK3 1724 aaKnown RBP33.49■■■□□ 2.95
SDF2L1-201ENST00000248958 RTL1A6NKG5 1358 aa33.48■■■□□ 2.95
SDF2L1-201ENST00000248958 CCDC7Q96M83 1385 aa33.48■■■□□ 2.95
SDF2L1-201ENST00000248958 AMPHP49418 695 aa33.48■■■□□ 2.95
SDF2L1-201ENST00000248958 WNK3Q9BYP7 1800 aa33.48■■■□□ 2.95
SDF2L1-201ENST00000248958 CDCA7Q9BWT1 371 aaPredicted RBP33.47■■■□□ 2.95
SDF2L1-201ENST00000248958 FAM208AQ9UK61 1670 aaKnown RBP33.47■■■□□ 2.95
SDF2L1-201ENST00000248958 ANKRD24Q8TF21 1146 aa33.46■■■□□ 2.95
SDF2L1-201ENST00000248958 KIF24Q5T7B8 1368 aa33.46■■■□□ 2.95
SDF2L1-201ENST00000248958 HOXC9P31274 260 aa33.45■■■□□ 2.95
SDF2L1-201ENST00000248958 NSD2O96028 1365 aa33.45■■■□□ 2.94
SDF2L1-201ENST00000248958 FBLN1P23142 703 aa33.43■■■□□ 2.94
SDF2L1-201ENST00000248958 PDE3BQ13370 1112 aa33.43■■■□□ 2.94
SDF2L1-201ENST00000248958 RRS1Q15050 365 aaKnown RBP33.42■■■□□ 2.94
SDF2L1-201ENST00000248958 KNSTRNQ9Y448 316 aa33.41■■■□□ 2.94
SDF2L1-201ENST00000248958 NLRP2Q9NX02 1062 aa33.4■■■□□ 2.94
SDF2L1-201ENST00000248958 MAP2P11137 1827 aaKnown RBP33.38■■■□□ 2.93
SDF2L1-201ENST00000248958 FLT4P35916 1363 aa33.37■■■□□ 2.93
SDF2L1-201ENST00000248958 LRRC37A3O60309 1634 aa33.37■■■□□ 2.93
SDF2L1-201ENST00000248958 WASHC2AQ641Q2 1341 aa33.36■■■□□ 2.93
SDF2L1-201ENST00000248958 DDB1Q16531 1140 aa33.36■■■□□ 2.93
SDF2L1-201ENST00000248958 FAM196AQ6ZSG2 479 aa33.36■■■□□ 2.93
SDF2L1-201ENST00000248958 DISP2A7MBM2 1401 aa33.36■■■□□ 2.93
SDF2L1-201ENST00000248958 SF3B2Q13435 895 aaKnown RBP33.35■■■□□ 2.93
SDF2L1-201ENST00000248958 SMG6Q86US8 1419 aaKnown RBP33.35■■■□□ 2.93
SDF2L1-201ENST00000248958 INSRP06213 1382 aa33.34■■■□□ 2.93
SDF2L1-201ENST00000248958 LTV1Q96GA3 475 aaPredicted RBP33.34■■■□□ 2.93
SDF2L1-201ENST00000248958 PEAK1Q9H792 1746 aa33.33■■■□□ 2.93
SDF2L1-201ENST00000248958 RGPD1P0DJD0 1748 aa33.32■■■□□ 2.92
SDF2L1-201ENST00000248958 FAM182BQ5T319 152 aa33.3■■■□□ 2.92
SDF2L1-201ENST00000248958 EP400Q96L91 3159 aa33.29■■■□□ 2.92
SDF2L1-201ENST00000248958 EXOC5O00471 708 aa33.29■■■□□ 2.92
SDF2L1-201ENST00000248958 IL2RBP14784 551 aa33.29■■■□□ 2.92
SDF2L1-201ENST00000248958 EMILIN1Q9Y6C2 1016 aa33.29■■■□□ 2.92
SDF2L1-201ENST00000248958 HSP90AB2PQ58FF8 381 aa33.28■■■□□ 2.92
SDF2L1-201ENST00000248958 RGPD2P0DJD1 1756 aa33.27■■■□□ 2.92
SDF2L1-201ENST00000248958 PER1O15534 1290 aaPredicted RBP33.27■■■□□ 2.92
SDF2L1-201ENST00000248958 MORC1Q86VD1 984 aa33.27■■■□□ 2.92
SDF2L1-201ENST00000248958 POLKQ9UBT6 870 aa33.27■■■□□ 2.92
SDF2L1-201ENST00000248958 AMER1Q5JTC6 1135 aaPredicted RBP33.26■■■□□ 2.91
SDF2L1-201ENST00000248958 OVOS2A0A0G2JMS6 1433 aa33.26■■■□□ 2.91
SDF2L1-201ENST00000248958 TNS2Q63HR2 1409 aa33.25■■■□□ 2.91
SDF2L1-201ENST00000248958 PPM1GO15355 546 aaPredicted RBP33.24■■■□□ 2.91
SDF2L1-201ENST00000248958 TNNT2P45379 298 aaPredicted RBP33.23■■■□□ 2.91
SDF2L1-201ENST00000248958 ZEB1P37275 1124 aaPredicted RBP33.22■■■□□ 2.91
SDF2L1-201ENST00000248958 BAG6P46379 1132 aa33.21■■■□□ 2.91
SDF2L1-201ENST00000248958 TNS1Q9HBL0 1735 aaKnown RBP33.2■■■□□ 2.91
SDF2L1-201ENST00000248958 NPC1L1Q9UHC9 1359 aa33.2■■■□□ 2.9
SDF2L1-201ENST00000248958 BCL9O00512 1426 aa33.19■■■□□ 2.9
SDF2L1-201ENST00000248958 NBPF6Q5VWK0 638 aa33.19■■■□□ 2.9
SDF2L1-201ENST00000248958 NBPF4Q96M43 638 aa33.19■■■□□ 2.9
SDF2L1-201ENST00000248958 MARCH10Q8NA82 808 aaPredicted RBP33.18■■■□□ 2.9
SDF2L1-201ENST00000248958 TRIM37O94972 964 aa33.17■■■□□ 2.9
SDF2L1-201ENST00000248958 SBF2Q86WG5 1849 aa33.16■■■□□ 2.9
SDF2L1-201ENST00000248958 DEFB132Q7Z7B7 95 aa33.14■■■□□ 2.9
SDF2L1-201ENST00000248958 RAPGEF4Q8WZA2 1011 aa33.12■■■□□ 2.89
SDF2L1-201ENST00000248958 CC2D1BQ5T0F9 858 aaKnown RBP33.11■■■□□ 2.89
SDF2L1-201ENST00000248958 NCAPD2Q15021 1401 aa33.1■■■□□ 2.89
SDF2L1-201ENST00000248958 USHBP1Q8N6Y0 703 aa33.09■■■□□ 2.89
SDF2L1-201ENST00000248958 MEGF6O75095 1541 aa33.08■■■□□ 2.89
SDF2L1-201ENST00000248958 TATP17735 454 aaPredicted RBP33.08■■■□□ 2.89
SDF2L1-201ENST00000248958 APBA3O96018 575 aa33.07■■■□□ 2.88
SDF2L1-201ENST00000248958 EIF4A2Q14240 407 aaKnown RBP33.07■■■□□ 2.88
SDF2L1-201ENST00000248958 ZCRB1Q8TBF4 217 aaKnown RBP33.07■■■□□ 2.88
SDF2L1-201ENST00000248958 EYA1Q99502 592 aa33.06■■■□□ 2.88
SDF2L1-201ENST00000248958 BCL11BQ9C0K0 894 aaPredicted RBP33.05■■■□□ 2.88
SDF2L1-201ENST00000248958 PARD3Q8TEW0 1356 aa33.05■■■□□ 2.88
SDF2L1-201ENST00000248958 EN1Q05925 392 aaPredicted RBP33.04■■■□□ 2.88
SDF2L1-201ENST00000248958 SHANK3Q9BYB0 1731 aa33.03■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms