RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 ARHGEF12Q9NZN5 1544 aa22.22■■□□□ 1.15
PTPN12-201ENST00000248594 KIF3BO15066 747 aa22.21■■□□□ 1.15
PTPN12-201ENST00000248594 SYAP1Q96A49 352 aaPredicted RBP22.21■■□□□ 1.15
PTPN12-201ENST00000248594 FBLN1P23142 703 aa22.21■■□□□ 1.15
PTPN12-201ENST00000248594 RIMBP3CA6NJZ7 1639 aa22.21■■□□□ 1.15
PTPN12-201ENST00000248594 RIMBP3BA6NNM3 1639 aa22.21■■□□□ 1.15
PTPN12-201ENST00000248594 RIMBP3Q9UFD9 1639 aa22.21■■□□□ 1.15
PTPN12-201ENST00000248594 A2MP01023 1474 aa22.2■■□□□ 1.14
PTPN12-201ENST00000248594 MBD3O95983 291 aa22.2■■□□□ 1.14
PTPN12-201ENST00000248594 STK26Q9P289 416 aa22.2■■□□□ 1.14
PTPN12-201ENST00000248594 WDR7Q9Y4E6 1490 aa22.2■■□□□ 1.14
PTPN12-201ENST00000248594 IFT57Q9NWB7 429 aa22.19■■□□□ 1.14
PTPN12-201ENST00000248594 FAM135AQ9P2D6 1515 aa22.19■■□□□ 1.14
PTPN12-201ENST00000248594 GPRASP1Q5JY77 1395 aa22.19■■□□□ 1.14
PTPN12-201ENST00000248594 IPO8O15397 1037 aaKnown RBP22.19■■□□□ 1.14
PTPN12-201ENST00000248594 PIK3C2GO75747 1445 aa22.19■■□□□ 1.14
PTPN12-201ENST00000248594 TRIM6-TRIM34B2RNG4 842 aa22.18■■□□□ 1.14
PTPN12-201ENST00000248594 CCDC27Q2M243 656 aa22.18■■□□□ 1.14
PTPN12-201ENST00000248594 TRIM34Q9BYJ4 488 aa22.18■■□□□ 1.14
PTPN12-201ENST00000248594 OTUD7AQ8TE49 926 aaPredicted RBP22.18■■□□□ 1.14
PTPN12-201ENST00000248594 NGEFQ8N5V2 710 aa22.17■■□□□ 1.14
PTPN12-201ENST00000248594 ASXL1Q8IXJ9 1541 aa22.17■■□□□ 1.14
PTPN12-201ENST00000248594 LARP6Q9BRS8 491 aaKnown RBP22.16■■□□□ 1.14
PTPN12-201ENST00000248594 ATAD2Q6PL18 1390 aa22.15■■□□□ 1.14
PTPN12-201ENST00000248594 ZMYM3Q14202 1370 aa22.15■■□□□ 1.14
PTPN12-201ENST00000248594 GSPT1P15170 499 aaKnown RBP22.15■■□□□ 1.14
PTPN12-201ENST00000248594 FKBP5Q13451 457 aaPredicted RBP22.14■■□□□ 1.14
PTPN12-201ENST00000248594 GIMAP6Q6P9H5 292 aa22.14■■□□□ 1.14
PTPN12-201ENST00000248594 CWC22Q9HCG8 908 aaKnown RBP22.14■■□□□ 1.14
PTPN12-201ENST00000248594 PLA2R1Q13018 1463 aa22.14■■□□□ 1.14
PTPN12-201ENST00000248594 TNNT3P45378 269 aaPredicted RBP22.14■■□□□ 1.13
PTPN12-201ENST00000248594 TAF3Q5VWG9 929 aa22.14■■□□□ 1.13
PTPN12-201ENST00000248594 FIBPO43427 364 aa22.13■■□□□ 1.13
PTPN12-201ENST00000248594 ADGRF5Q8IZF2 1346 aa22.13■■□□□ 1.13
PTPN12-201ENST00000248594 UPF3BQ9BZI7 483 aaKnown RBP22.13■■□□□ 1.13
PTPN12-201ENST00000248594 CLEC17AQ6ZS10 378 aa22.13■■□□□ 1.13
PTPN12-201ENST00000248594 DHX37Q8IY37 1157 aaKnown RBP22.13■■□□□ 1.13
PTPN12-201ENST00000248594 RTF1Q92541 710 aaKnown RBP22.13■■□□□ 1.13
PTPN12-201ENST00000248594 USP48Q86UV5 1035 aa22.12■■□□□ 1.13
PTPN12-201ENST00000248594 ST7Q9NRC1 585 aa22.12■■□□□ 1.13
PTPN12-201ENST00000248594 OGFRQ9NZT2 677 aa22.12■■□□□ 1.13
PTPN12-201ENST00000248594 PHF14O94880 888 aa22.12■■□□□ 1.13
PTPN12-201ENST00000248594 CYP2E1P05181 493 aaPredicted RBP22.12■■□□□ 1.13
PTPN12-201ENST00000248594 CASC1Q6TDU7 716 aa22.12■■□□□ 1.13
PTPN12-201ENST00000248594 GGT6Q6P531 493 aa22.11■■□□□ 1.13
PTPN12-201ENST00000248594 THUMPD2Q9BTF0 503 aaKnown RBP22.11■■□□□ 1.13
PTPN12-201ENST00000248594 TIGD1Q96MW7 591 aa22.11■■□□□ 1.13
PTPN12-201ENST00000248594 USP26Q9BXU7 913 aa22.11■■□□□ 1.13
PTPN12-201ENST00000248594 CCDC66A2RUB6 948 aa22.11■■□□□ 1.13
PTPN12-201ENST00000248594 SRPK2P78362 688 aaKnown RBP22.1■■□□□ 1.13
PTPN12-201ENST00000248594 TMX3Q96JJ7 454 aa22.1■■□□□ 1.13
PTPN12-201ENST00000248594 TMX1Q9H3N1 280 aa22.1■■□□□ 1.13
PTPN12-201ENST00000248594 TSHZ3Q63HK5 1081 aa22.1■■□□□ 1.13
PTPN12-201ENST00000248594 PTGS1P23219 599 aa22.09■■□□□ 1.13
PTPN12-201ENST00000248594 INTS3Q68E01 1043 aaKnown RBP22.09■■□□□ 1.13
PTPN12-201ENST00000248594 NCBP1Q09161 790 aaKnown RBP22.09■■□□□ 1.13
PTPN12-201ENST00000248594 CYB5RLQ6IPT4 315 aa22.09■■□□□ 1.13
PTPN12-201ENST00000248594 CHMP4CQ96CF2 233 aa22.09■■□□□ 1.13
PTPN12-201ENST00000248594 LRMPQ12912 555 aa22.08■■□□□ 1.13
PTPN12-201ENST00000248594 KDM5DQ9BY66 1539 aa22.07■■□□□ 1.12
PTPN12-201ENST00000248594 GGNBP2Q9H3C7 697 aa22.07■■□□□ 1.12
PTPN12-201ENST00000248594 ABCC10Q5T3U5 1492 aa22.07■■□□□ 1.12
PTPN12-201ENST00000248594 GTF2F1P35269 517 aaKnown RBP eCLIP22.07■■□□□ 1.123e-7■■■■■ 39.9
PTPN12-201ENST00000248594 GCC1Q96CN9 775 aa22.06■■□□□ 1.12
PTPN12-201ENST00000248594 ARHGAP5Q13017 1502 aa22.06■■□□□ 1.12
PTPN12-201ENST00000248594 ITSN2Q9NZM3 1697 aa22.06■■□□□ 1.12
PTPN12-201ENST00000248594 CNPY2Q9Y2B0 182 aa22.06■■□□□ 1.12
PTPN12-201ENST00000248594 TNNT1P13805 278 aa22.06■■□□□ 1.12
PTPN12-201ENST00000248594 CABP2Q9NPB3 220 aa22.06■■□□□ 1.12
PTPN12-201ENST00000248594 CDC42BPAQ5VT25 1732 aa22.05■■□□□ 1.12
PTPN12-201ENST00000248594 CCDC112Q8NEF3 446 aa22.05■■□□□ 1.12
PTPN12-201ENST00000248594 TPD52L1Q16890 204 aaPredicted RBP22.05■■□□□ 1.12
PTPN12-201ENST00000248594 NPM1P06748 294 aaKnown RBP eCLIP22.04■■□□□ 1.12
PTPN12-201ENST00000248594 PLEKHM2Q8IWE5 1019 aa22.04■■□□□ 1.12
PTPN12-201ENST00000248594 FEZ1Q99689 392 aa22.04■■□□□ 1.12
PTPN12-201ENST00000248594 SLFN14P0C7P3 912 aa22.04■■□□□ 1.12
PTPN12-201ENST00000248594 SDSP20132 328 aa22.04■■□□□ 1.12
PTPN12-201ENST00000248594 TMPOP42166 694 aaKnown RBP22.04■■□□□ 1.12
PTPN12-201ENST00000248594 KCNF1Q9H3M0 494 aa22.04■■□□□ 1.12
PTPN12-201ENST00000248594 SYCP2Q9BX26 1530 aa22.03■■□□□ 1.12
PTPN12-201ENST00000248594 KIAA1524Q8TCG1 905 aa22.03■■□□□ 1.12
PTPN12-201ENST00000248594 KDM4AO75164 1064 aa22.03■■□□□ 1.12
PTPN12-201ENST00000248594 SIRT2Q8IXJ6 389 aa22.03■■□□□ 1.12
PTPN12-201ENST00000248594 ANO2Q9NQ90 1003 aa22.03■■□□□ 1.12
PTPN12-201ENST00000248594 SPAG9O60271 1321 aaKnown RBP22.03■■□□□ 1.12
PTPN12-201ENST00000248594 CAMK4Q16566 473 aa22.02■■□□□ 1.12
PTPN12-201ENST00000248594 NSD3Q9BZ95 1437 aa22.02■■□□□ 1.12
PTPN12-201ENST00000248594 CCDC186Q7Z3E2 898 aa22.02■■□□□ 1.12
PTPN12-201ENST00000248594 TRPM1Q7Z4N2 1603 aa22.02■■□□□ 1.12
PTPN12-201ENST00000248594 CTNNA3Q9UI47 895 aa22.02■■□□□ 1.11
PTPN12-201ENST00000248594 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.01■■□□□ 1.11
PTPN12-201ENST00000248594 ANKRD7Q92527 254 aa22.01■■□□□ 1.11
PTPN12-201ENST00000248594 ADGRL2O95490 1459 aa22.01■■□□□ 1.11
PTPN12-201ENST00000248594 TTC37Q6PGP7 1564 aa22.01■■□□□ 1.11
PTPN12-201ENST00000248594 GOLGA6L6A8MZA4 724 aa22■■□□□ 1.11
PTPN12-201ENST00000248594 IRX3P78415 501 aaPredicted RBP22■■□□□ 1.11
PTPN12-201ENST00000248594 GTF3C6Q969F1 213 aa22■■□□□ 1.11
PTPN12-201ENST00000248594 RILPL2Q969X0 211 aa22■■□□□ 1.11
PTPN12-201ENST00000248594 ASXL2Q76L83 1435 aa22■■□□□ 1.11
PTPN12-201ENST00000248594 AP5Z1O43299 807 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms