RNA–Protein interactions for RNA: ENST00000246957.9

TRAP1-201, Transcript of TNF receptor associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAP1, Length 2,296 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-201ENST00000246957 HOXC9P31274 260 aa17.63■□□□□ 0.41
TRAP1-201ENST00000246957 USHBP1Q8N6Y0 703 aa17.62■□□□□ 0.41
TRAP1-201ENST00000246957 AATKQ6ZMQ8 1374 aa17.61■□□□□ 0.41
TRAP1-201ENST00000246957 PRDM11Q9NQV5 511 aa17.61■□□□□ 0.41
TRAP1-201ENST00000246957 EIF4A2Q14240 407 aaKnown RBP17.6■□□□□ 0.41
TRAP1-201ENST00000246957 CAMTA1Q9Y6Y1 1673 aa17.6■□□□□ 0.41
TRAP1-201ENST00000246957 KCNH5Q8NCM2 988 aa17.59■□□□□ 0.41
TRAP1-201ENST00000246957 SMG6Q86US8 1419 aaKnown RBP17.59■□□□□ 0.41
TRAP1-201ENST00000246957 U2SURPO15042 1029 aaKnown RBP17.59■□□□□ 0.41
TRAP1-201ENST00000246957 HMOX1P09601 288 aa17.59■□□□□ 0.41
TRAP1-201ENST00000246957 AEBP1Q8IUX7 1158 aa17.59■□□□□ 0.41
TRAP1-201ENST00000246957 CCDC146Q8IYE0 955 aa17.59■□□□□ 0.41
TRAP1-201ENST00000246957 JCADQ9P266 1359 aa17.58■□□□□ 0.4
TRAP1-201ENST00000246957 CDK12Q9NYV4 1490 aaPredicted RBP17.58■□□□□ 0.4
TRAP1-201ENST00000246957 PLCH1Q4KWH8 1693 aa17.58■□□□□ 0.4
TRAP1-201ENST00000246957 PNISRQ8TF01 805 aaKnown RBP17.58■□□□□ 0.4
TRAP1-201ENST00000246957 STRN4Q9NRL3 753 aa17.58■□□□□ 0.4
TRAP1-201ENST00000246957 ADAMTS8Q9UP79 889 aa17.58■□□□□ 0.4
TRAP1-201ENST00000246957 FLT4P35916 1363 aa17.57■□□□□ 0.4
TRAP1-201ENST00000246957 C8orf37Q96NL8 207 aa17.57■□□□□ 0.4
TRAP1-201ENST00000246957 LMO7Q8WWI1 1683 aa17.57■□□□□ 0.4
TRAP1-201ENST00000246957 CCER2I3L3R5 266 aa17.56■□□□□ 0.4
TRAP1-201ENST00000246957 FBXO41Q8TF61 875 aa17.56■□□□□ 0.4
TRAP1-201ENST00000246957 IL13P35225 146 aa17.55■□□□□ 0.4
TRAP1-201ENST00000246957 IP6K1Q92551 441 aa17.55■□□□□ 0.4
TRAP1-201ENST00000246957 BTG4Q9NY30 223 aa17.55■□□□□ 0.4
TRAP1-201ENST00000246957 USP35Q9P2H5 1018 aa17.55■□□□□ 0.4
TRAP1-201ENST00000246957 DIAPH1O60610 1272 aaKnown RBP17.54■□□□□ 0.4
TRAP1-201ENST00000246957 ANKRD24Q8TF21 1146 aa17.54■□□□□ 0.4
TRAP1-201ENST00000246957 SALL2Q9Y467 1007 aaPredicted RBP17.54■□□□□ 0.4
TRAP1-201ENST00000246957 U2AF1L5P0DN76 240 aaPredicted RBP17.54■□□□□ 0.4
TRAP1-201ENST00000246957 U2AF1Q01081 240 aaKnown RBP eCLIP17.54■□□□□ 0.4
TRAP1-201ENST00000246957 NBPF6Q5VWK0 638 aa17.54■□□□□ 0.4
TRAP1-201ENST00000246957 NBPF4Q96M43 638 aa17.54■□□□□ 0.4
TRAP1-201ENST00000246957 RGPD1P0DJD0 1748 aa17.53■□□□□ 0.4
TRAP1-201ENST00000246957 LARP1Q6PKG0 1096 aaKnown RBP17.52■□□□□ 0.4
TRAP1-201ENST00000246957 EYA1Q99502 592 aa17.52■□□□□ 0.4
TRAP1-201ENST00000246957 CPDO75976 1380 aa17.52■□□□□ 0.39
TRAP1-201ENST00000246957 CFAP53Q96M91 514 aa17.51■□□□□ 0.39
TRAP1-201ENST00000246957 INSRP06213 1382 aa17.51■□□□□ 0.39
TRAP1-201ENST00000246957 ERBB3P21860 1342 aa17.51■□□□□ 0.39
TRAP1-201ENST00000246957 COL5A2P05997 1499 aaPredicted RBP17.51■□□□□ 0.39
TRAP1-201ENST00000246957 COL14A1Q05707 1796 aaKnown RBP17.5■□□□□ 0.39
TRAP1-201ENST00000246957 CSB-PGBD3P0DP91 1061 aa17.5■□□□□ 0.39
TRAP1-201ENST00000246957 WDR43Q15061 677 aaKnown RBP eCLIP17.5■□□□□ 0.39
TRAP1-201ENST00000246957 SULT6B1Q6IMI4 303 aa17.5■□□□□ 0.39
TRAP1-201ENST00000246957 NRAPQ86VF7 1730 aa17.49■□□□□ 0.39
TRAP1-201ENST00000246957 ILDR1Q86SU0 546 aaPredicted RBP17.49■□□□□ 0.39
TRAP1-201ENST00000246957 NGLY1Q96IV0 654 aa17.49■□□□□ 0.39
TRAP1-201ENST00000246957 NLRP2Q9NX02 1062 aa17.49■□□□□ 0.39
TRAP1-201ENST00000246957 RRP7AQ9Y3A4 280 aaKnown RBP17.49■□□□□ 0.39
TRAP1-201ENST00000246957 MEX3CQ5U5Q3 659 aaKnown RBP17.48■□□□□ 0.39
TRAP1-201ENST00000246957 RTL1A6NKG5 1358 aa17.48■□□□□ 0.39
TRAP1-201ENST00000246957 PHACTR3Q96KR7 559 aa17.47■□□□□ 0.39
TRAP1-201ENST00000246957 FAM208AQ9UK61 1670 aaKnown RBP17.47■□□□□ 0.39
TRAP1-201ENST00000246957 DLG5Q8TDM6 1919 aa17.47■□□□□ 0.39
TRAP1-201ENST00000246957 NEUROD2Q15784 382 aa17.46■□□□□ 0.39
TRAP1-201ENST00000246957 KAT6BQ8WYB5 2073 aa17.46■□□□□ 0.39
TRAP1-201ENST00000246957 PRKAR2BP31323 418 aa17.46■□□□□ 0.39
TRAP1-201ENST00000246957 EVA1CP58658 441 aa17.45■□□□□ 0.38
TRAP1-201ENST00000246957 TOM1L2Q6ZVM7 507 aa17.45■□□□□ 0.38
TRAP1-201ENST00000246957 SPATA31A6Q5VVP1 1343 aa17.45■□□□□ 0.38
TRAP1-201ENST00000246957 BLMP54132 1417 aaPredicted RBP17.45■□□□□ 0.38
TRAP1-201ENST00000246957 RSPH6AQ9H0K4 717 aa17.45■□□□□ 0.38
TRAP1-201ENST00000246957 BCL9LQ86UU0 1499 aa17.45■□□□□ 0.38
TRAP1-201ENST00000246957 IGSF1Q8N6C5 1336 aa17.44■□□□□ 0.38
TRAP1-201ENST00000246957 SLIT2O94813 1529 aa17.43■□□□□ 0.38
TRAP1-201ENST00000246957 AFF2P51816 1311 aa17.43■□□□□ 0.38
TRAP1-201ENST00000246957 WDR17Q8IZU2 1322 aa17.42■□□□□ 0.38
TRAP1-201ENST00000246957 CCDC9Q9Y3X0 531 aaKnown RBP17.42■□□□□ 0.38
TRAP1-201ENST00000246957 MEGF6O75095 1541 aa17.42■□□□□ 0.38
TRAP1-201ENST00000246957 APAF1O14727 1248 aa17.42■□□□□ 0.38
TRAP1-201ENST00000246957 HNRNPUQ00839 825 aaKnown RBP eCLIP17.42■□□□□ 0.38
TRAP1-201ENST00000246957 NWD2Q9ULI1 1742 aa17.41■□□□□ 0.38
TRAP1-201ENST00000246957 PLEKHF1Q96S99 279 aa17.41■□□□□ 0.38
TRAP1-201ENST00000246957 NUDCQ9Y266 331 aa17.41■□□□□ 0.38
TRAP1-201ENST00000246957 KIF24Q5T7B8 1368 aa17.41■□□□□ 0.38
TRAP1-201ENST00000246957 USP21Q9UK80 565 aa17.4■□□□□ 0.38
TRAP1-201ENST00000246957 VIRMAQ69YN4 1812 aaKnown RBP17.4■□□□□ 0.38
TRAP1-201ENST00000246957 TCP11L2Q8N4U5 519 aa17.37■□□□□ 0.37
TRAP1-201ENST00000246957 THUMPD2Q9BTF0 503 aaKnown RBP17.37■□□□□ 0.37
TRAP1-201ENST00000246957 DCTN1Q14203 1278 aa17.37■□□□□ 0.37
TRAP1-201ENST00000246957 UNC5CLQ8IV45 518 aa17.37■□□□□ 0.37
TRAP1-201ENST00000246957 FNBP4Q8N3X1 1017 aaPredicted RBP17.37■□□□□ 0.37
TRAP1-201ENST00000246957 KDRP35968 1356 aa17.37■□□□□ 0.37
TRAP1-201ENST00000246957 CRB1P82279 1406 aa17.37■□□□□ 0.37
TRAP1-201ENST00000246957 ABCC6O95255 1503 aa17.37■□□□□ 0.37
TRAP1-201ENST00000246957 SHANK3Q9BYB0 1731 aa17.36■□□□□ 0.37
TRAP1-201ENST00000246957 WNK3Q9BYP7 1800 aa17.36■□□□□ 0.37
TRAP1-201ENST00000246957 MTHFSDQ2M296 383 aaKnown RBP17.36■□□□□ 0.37
TRAP1-201ENST00000246957 FAM98CQ17RN3 349 aaKnown RBP17.35■□□□□ 0.37
TRAP1-201ENST00000246957 RGS17Q9UGC6 210 aaPredicted RBP17.35■□□□□ 0.37
TRAP1-201ENST00000246957 FCHSD2O94868 740 aa17.34■□□□□ 0.37
TRAP1-201ENST00000246957 GLI3P10071 1580 aa17.34■□□□□ 0.37
TRAP1-201ENST00000246957 FAM182BQ5T319 152 aa17.34■□□□□ 0.37
TRAP1-201ENST00000246957 RUNDC1Q96C34 613 aa17.33■□□□□ 0.37
TRAP1-201ENST00000246957 SPATA31A1Q5TZJ5 1347 aa17.33■□□□□ 0.37
TRAP1-201ENST00000246957 NCAPD2Q15021 1401 aa17.33■□□□□ 0.36
TRAP1-201ENST00000246957 CARD10Q9BWT7 1032 aa17.33■□□□□ 0.36
TRAP1-201ENST00000246957 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms