RNA–Protein interactions for RNA: ENST00000246657.2

CCR7-201, Transcript of C-C motif chemokine receptor 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR7, Length 2,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-201ENST00000246657 ST20-MTHFSA0A0A6YYL1 179 aa16.72■□□□□ 0.27
CCR7-201ENST00000246657 HSP90AB3PQ58FF7 597 aa16.72■□□□□ 0.27
CCR7-201ENST00000246657 TPD52L2O43399 206 aaKnown RBP16.71■□□□□ 0.27
CCR7-201ENST00000246657 MARCH6O60337 910 aa16.71■□□□□ 0.27
CCR7-201ENST00000246657 CCDC82Q8N4S0 544 aa16.71■□□□□ 0.27
CCR7-201ENST00000246657 PDCL3Q9H2J4 239 aa16.7■□□□□ 0.26
CCR7-201ENST00000246657 PAK3O75914 559 aaPredicted RBP16.7■□□□□ 0.26
CCR7-201ENST00000246657 SPINK5Q9NQ38 1064 aaPredicted RBP16.7■□□□□ 0.26
CCR7-201ENST00000246657 TRPM2O94759 1503 aa16.69■□□□□ 0.26
CCR7-201ENST00000246657 ADAMTS13Q76LX8 1427 aa16.69■□□□□ 0.26
CCR7-201ENST00000246657 ARID4AP29374 1257 aaPredicted RBP16.69■□□□□ 0.26
CCR7-201ENST00000246657 RALBP1Q15311 655 aa16.69■□□□□ 0.26
CCR7-201ENST00000246657 RGL3Q3MIN7 710 aa16.69■□□□□ 0.26
CCR7-201ENST00000246657 NUTM2DQ5VT03 806 aaPredicted RBP16.69■□□□□ 0.26
CCR7-201ENST00000246657 TBX22Q9Y458 520 aa16.69■□□□□ 0.26
CCR7-201ENST00000246657 CLTCL1P53675 1640 aa16.69■□□□□ 0.26
CCR7-201ENST00000246657 MSH6P52701 1360 aa16.68■□□□□ 0.26
CCR7-201ENST00000246657 KIF1BO60333 1816 aa16.68■□□□□ 0.26
CCR7-201ENST00000246657 ROBO1Q9Y6N7 1651 aa16.68■□□□□ 0.26
CCR7-201ENST00000246657 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCR7-201ENST00000246657 FAM135BQ49AJ0 1406 aa16.67■□□□□ 0.26
CCR7-201ENST00000246657 RBM33Q96EV2 1170 aaKnown RBP16.67■□□□□ 0.26
CCR7-201ENST00000246657 ZBED9Q6R2W3 1325 aa16.67■□□□□ 0.26
CCR7-201ENST00000246657 PIK3R4Q99570 1358 aa16.67■□□□□ 0.26
CCR7-201ENST00000246657 POLD1P28340 1107 aa16.67■□□□□ 0.26
CCR7-201ENST00000246657 PPME1Q9Y570 386 aa16.66■□□□□ 0.26
CCR7-201ENST00000246657 RBM26Q5T8P6 1007 aaKnown RBP16.65■□□□□ 0.26
CCR7-201ENST00000246657 ANKRD13AQ8IZ07 590 aa16.65■□□□□ 0.26
CCR7-201ENST00000246657 SOCS7O14512 581 aa16.65■□□□□ 0.26
CCR7-201ENST00000246657 SMAP1Q8IYB5 467 aaPredicted RBP16.65■□□□□ 0.26
CCR7-201ENST00000246657 SETBP1Q9Y6X0 1596 aa16.65■□□□□ 0.26
CCR7-201ENST00000246657 NRXN3Q9Y4C0 1643 aa16.65■□□□□ 0.26
CCR7-201ENST00000246657 RBM27Q9P2N5 1060 aaKnown RBP16.64■□□□□ 0.25
CCR7-201ENST00000246657 NCOA3Q9Y6Q9 1424 aa16.64■□□□□ 0.25
CCR7-201ENST00000246657 NGEFQ8N5V2 710 aa16.64■□□□□ 0.25
CCR7-201ENST00000246657 KTN1Q86UP2 1357 aaKnown RBP16.63■□□□□ 0.25
CCR7-201ENST00000246657 B4GALNT3Q6L9W6 998 aa16.62■□□□□ 0.25
CCR7-201ENST00000246657 NEXMIFQ5QGS0 1516 aa16.62■□□□□ 0.25
CCR7-201ENST00000246657 FOXD4Q12950 439 aaPredicted RBP16.62■□□□□ 0.25
CCR7-201ENST00000246657 GORABQ5T7V8 394 aa16.62■□□□□ 0.25
CCR7-201ENST00000246657 SDR16C5Q8N3Y7 309 aa16.62■□□□□ 0.25
CCR7-201ENST00000246657 TESPA1A2RU30 521 aaPredicted RBP16.61■□□□□ 0.25
CCR7-201ENST00000246657 IPO9Q96P70 1041 aaKnown RBP16.61■□□□□ 0.25
CCR7-201ENST00000246657 MTA3Q9BTC8 594 aa16.61■□□□□ 0.25
CCR7-201ENST00000246657 XRN1Q8IZH2 1706 aaKnown RBP16.61■□□□□ 0.25
CCR7-201ENST00000246657 NRDCO43847 1150 aa16.61■□□□□ 0.25
CCR7-201ENST00000246657 TSPAN18Q96SJ8 248 aa16.61■□□□□ 0.25
CCR7-201ENST00000246657 RPS6KL1Q9Y6S9 549 aa16.61■□□□□ 0.25
CCR7-201ENST00000246657 GOLIM4O00461 696 aa16.6■□□□□ 0.25
CCR7-201ENST00000246657 ANP32AP39687 249 aaKnown RBP16.6■□□□□ 0.25
CCR7-201ENST00000246657 UTP14CQ5TAP6 766 aaKnown RBP16.6■□□□□ 0.25
CCR7-201ENST00000246657 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.6■□□□□ 0.25
CCR7-201ENST00000246657 PHLPP1O60346 1717 aa16.59■□□□□ 0.25
CCR7-201ENST00000246657 ZNF500O60304 480 aaPredicted RBP16.59■□□□□ 0.25
CCR7-201ENST00000246657 EVI5LQ96CN4 794 aa16.59■□□□□ 0.25
CCR7-201ENST00000246657 PTPRUQ92729 1446 aa16.58■□□□□ 0.25
CCR7-201ENST00000246657 PPP4R3BQ5MIZ7 849 aa16.58■□□□□ 0.25
CCR7-201ENST00000246657 SLAIN2Q9P270 581 aa16.58■□□□□ 0.25
CCR7-201ENST00000246657 SUGT1Q9Y2Z0 365 aa16.58■□□□□ 0.25
CCR7-201ENST00000246657 KIAA1210Q9ULL0 1709 aa16.58■□□□□ 0.25
CCR7-201ENST00000246657 AMOTL2Q9Y2J4 779 aa16.58■□□□□ 0.24
CCR7-201ENST00000246657 TAF3Q5VWG9 929 aa16.57■□□□□ 0.24
CCR7-201ENST00000246657 TESK2Q96S53 571 aa16.57■□□□□ 0.24
CCR7-201ENST00000246657 DNTTIP2Q5QJE6 756 aaKnown RBP16.56■□□□□ 0.24
CCR7-201ENST00000246657 IFT172Q9UG01 1749 aa16.56■□□□□ 0.24
CCR7-201ENST00000246657 YY1AP1Q9H869 796 aa16.55■□□□□ 0.24
CCR7-201ENST00000246657 BRD4O60885 1362 aaPredicted RBP16.55■□□□□ 0.24
CCR7-201ENST00000246657 MYBBP1AQ9BQG0 1328 aaKnown RBP16.55■□□□□ 0.24
CCR7-201ENST00000246657 DNAJC14Q6Y2X3 702 aaPredicted RBP16.55■□□□□ 0.24
CCR7-201ENST00000246657 PNISRQ8TF01 805 aaKnown RBP16.55■□□□□ 0.24
CCR7-201ENST00000246657 SPATA32Q96LK8 384 aa16.55■□□□□ 0.24
CCR7-201ENST00000246657 GEMIN8Q9NWZ8 242 aaKnown RBP16.55■□□□□ 0.24
CCR7-201ENST00000246657 PPLO60437 1756 aa16.54■□□□□ 0.24
CCR7-201ENST00000246657 NBPF10Q6P3W6 841 aaKnown RBP16.54■□□□□ 0.24
CCR7-201ENST00000246657 CADPS2Q86UW7 1296 aa16.54■□□□□ 0.24
CCR7-201ENST00000246657 ZNF513Q8N8E2 541 aaPredicted RBP16.54■□□□□ 0.24
CCR7-201ENST00000246657 C19orf44Q9H6X5 657 aa16.54■□□□□ 0.24
CCR7-201ENST00000246657 ATF3P18847 181 aa16.54■□□□□ 0.24
CCR7-201ENST00000246657 ERCC3P19447 782 aa16.54■□□□□ 0.24
CCR7-201ENST00000246657 NBPF6Q5VWK0 638 aa16.54■□□□□ 0.24
CCR7-201ENST00000246657 NBPF5PQ86XG9 351 aaPredicted RBP16.54■□□□□ 0.24
CCR7-201ENST00000246657 NBPF4Q96M43 638 aa16.54■□□□□ 0.24
CCR7-201ENST00000246657 GPBP1L1Q9HC44 474 aaPredicted RBP16.54■□□□□ 0.24
CCR7-201ENST00000246657 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
CCR7-201ENST00000246657 METP08581 1390 aa16.54■□□□□ 0.24
CCR7-201ENST00000246657 DCCP43146 1447 aa16.53■□□□□ 0.24
CCR7-201ENST00000246657 SSFA2P28290 1259 aa16.53■□□□□ 0.24
CCR7-201ENST00000246657 TMC1Q8TDI8 760 aa16.53■□□□□ 0.24
CCR7-201ENST00000246657 ARHGEF1Q92888 912 aaKnown RBP16.53■□□□□ 0.24
CCR7-201ENST00000246657 ZBTB47Q9UFB7 747 aaPredicted RBP16.53■□□□□ 0.24
CCR7-201ENST00000246657 LRPPRCP42704 1394 aaKnown RBP16.53■□□□□ 0.24
CCR7-201ENST00000246657 PARD3Q8TEW0 1356 aa16.53■□□□□ 0.24
CCR7-201ENST00000246657 SETD1AO15047 1707 aaKnown RBP16.53■□□□□ 0.24
CCR7-201ENST00000246657 MAP2K1Q02750 393 aaPredicted RBP16.53■□□□□ 0.24
CCR7-201ENST00000246657 HDAC1Q13547 482 aaPredicted RBP16.53■□□□□ 0.24
CCR7-201ENST00000246657 COL16A1Q07092 1604 aaPredicted RBP16.52■□□□□ 0.24
CCR7-201ENST00000246657 SMG6Q86US8 1419 aaKnown RBP16.52■□□□□ 0.23
CCR7-201ENST00000246657 PER1O15534 1290 aaPredicted RBP16.51■□□□□ 0.23
CCR7-201ENST00000246657 KRBA2Q6ZNG9 492 aa16.51■□□□□ 0.23
CCR7-201ENST00000246657 RPGRIP1LQ68CZ1 1315 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 414.5 ms