RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 IP6K1Q92551 441 aa15.4■□□□□ 0.06
TREM1-201ENST00000244709 ABCC6O95255 1503 aa15.39■□□□□ 0.05
TREM1-201ENST00000244709 LMO7Q8WWI1 1683 aa15.39■□□□□ 0.05
TREM1-201ENST00000244709 DIAPH1O60610 1272 aaKnown RBP15.38■□□□□ 0.05
TREM1-201ENST00000244709 CHRNA2Q15822 529 aa15.38■□□□□ 0.05
TREM1-201ENST00000244709 FAM9BQ8IZU0 186 aa15.38■□□□□ 0.05
TREM1-201ENST00000244709 EIF4A2Q14240 407 aaKnown RBP15.38■□□□□ 0.05
TREM1-201ENST00000244709 PRDM11Q9NQV5 511 aa15.38■□□□□ 0.05
TREM1-201ENST00000244709 BLMP54132 1417 aaPredicted RBP15.37■□□□□ 0.05
TREM1-201ENST00000244709 RGPD1P0DJD0 1748 aa15.37■□□□□ 0.05
TREM1-201ENST00000244709 RGPD2P0DJD1 1756 aa15.37■□□□□ 0.05
TREM1-201ENST00000244709 COL14A1Q05707 1796 aaKnown RBP15.37■□□□□ 0.05
TREM1-201ENST00000244709 NUTM2BA6NNL0 878 aaPredicted RBP15.37■□□□□ 0.05
TREM1-201ENST00000244709 NUTM2EB1AL46 878 aaPredicted RBP15.37■□□□□ 0.05
TREM1-201ENST00000244709 IL13P35225 146 aa15.37■□□□□ 0.05
TREM1-201ENST00000244709 NUTM2AQ8IVF1 878 aaPredicted RBP15.37■□□□□ 0.05
TREM1-201ENST00000244709 AXIN2Q9Y2T1 843 aa15.37■□□□□ 0.05
TREM1-201ENST00000244709 WDR43Q15061 677 aaKnown RBP eCLIP15.36■□□□□ 0.05
TREM1-201ENST00000244709 PLCH1Q4KWH8 1693 aa15.35■□□□□ 0.05
TREM1-201ENST00000244709 FBXO41Q8TF61 875 aa15.35■□□□□ 0.05
TREM1-201ENST00000244709 LTV1Q96GA3 475 aaPredicted RBP15.35■□□□□ 0.05
TREM1-201ENST00000244709 LRP6O75581 1613 aa15.35■□□□□ 0.05
TREM1-201ENST00000244709 U2SURPO15042 1029 aaKnown RBP15.35■□□□□ 0.05
TREM1-201ENST00000244709 ADAMTS2O95450 1211 aa15.35■□□□□ 0.05
TREM1-201ENST00000244709 NUDCQ9Y266 331 aa15.35■□□□□ 0.05
TREM1-201ENST00000244709 SPATA31A6Q5VVP1 1343 aa15.35■□□□□ 0.05
TREM1-201ENST00000244709 CAMTA1Q9Y6Y1 1673 aa15.34■□□□□ 0.05
TREM1-201ENST00000244709 FAM83GA6ND36 823 aa15.34■□□□□ 0.05
TREM1-201ENST00000244709 ADAMTS8Q9UP79 889 aa15.34■□□□□ 0.05
TREM1-201ENST00000244709 FAM208AQ9UK61 1670 aaKnown RBP15.33■□□□□ 0.04
TREM1-201ENST00000244709 ANKRD24Q8TF21 1146 aa15.33■□□□□ 0.04
TREM1-201ENST00000244709 ERBB3P21860 1342 aa15.32■□□□□ 0.04
TREM1-201ENST00000244709 U2AF1L5P0DN76 240 aaPredicted RBP15.32■□□□□ 0.04
TREM1-201ENST00000244709 U2AF1Q01081 240 aaKnown RBP eCLIP15.32■□□□□ 0.04
TREM1-201ENST00000244709 COL5A2P05997 1499 aaPredicted RBP15.32■□□□□ 0.04
TREM1-201ENST00000244709 NRAPQ86VF7 1730 aa15.31■□□□□ 0.04
TREM1-201ENST00000244709 NWD2Q9ULI1 1742 aa15.3■□□□□ 0.04
TREM1-201ENST00000244709 EYA1Q99502 592 aa15.3■□□□□ 0.04
TREM1-201ENST00000244709 IGSF1Q8N6C5 1336 aa15.29■□□□□ 0.04
TREM1-201ENST00000244709 HMOX1P09601 288 aa15.29■□□□□ 0.04
TREM1-201ENST00000244709 BTG4Q9NY30 223 aa15.29■□□□□ 0.04
TREM1-201ENST00000244709 AEBP1Q8IUX7 1158 aa15.28■□□□□ 0.04
TREM1-201ENST00000244709 CSB-PGBD3P0DP91 1061 aa15.28■□□□□ 0.04
TREM1-201ENST00000244709 NBPF6Q5VWK0 638 aa15.28■□□□□ 0.04
TREM1-201ENST00000244709 SULT6B1Q6IMI4 303 aa15.28■□□□□ 0.04
TREM1-201ENST00000244709 CCDC146Q8IYE0 955 aa15.28■□□□□ 0.04
TREM1-201ENST00000244709 USHBP1Q8N6Y0 703 aa15.28■□□□□ 0.04
TREM1-201ENST00000244709 NBPF4Q96M43 638 aa15.28■□□□□ 0.04
TREM1-201ENST00000244709 SLIT2O94813 1529 aa15.27■□□□□ 0.04
TREM1-201ENST00000244709 YTHDC1Q96MU7 727 aaKnown RBP15.27■□□□□ 0.03
TREM1-201ENST00000244709 RSPH6AQ9H0K4 717 aa15.27■□□□□ 0.03
TREM1-201ENST00000244709 STRN4Q9NRL3 753 aa15.27■□□□□ 0.03
TREM1-201ENST00000244709 WDR17Q8IZU2 1322 aa15.26■□□□□ 0.03
TREM1-201ENST00000244709 NCAPD2Q15021 1401 aa15.26■□□□□ 0.03
TREM1-201ENST00000244709 C8orf37Q96NL8 207 aa15.26■□□□□ 0.03
TREM1-201ENST00000244709 KDRP35968 1356 aa15.26■□□□□ 0.03
TREM1-201ENST00000244709 FCHSD2O94868 740 aa15.25■□□□□ 0.03
TREM1-201ENST00000244709 EVA1CP58658 441 aa15.25■□□□□ 0.03
TREM1-201ENST00000244709 MEX3CQ5U5Q3 659 aaKnown RBP15.25■□□□□ 0.03
TREM1-201ENST00000244709 NLRP2Q9NX02 1062 aa15.25■□□□□ 0.03
TREM1-201ENST00000244709 SENP3-EIF4A1A0A087X0R7 540 aa15.25■□□□□ 0.03
TREM1-201ENST00000244709 PRKAR2BP31323 418 aa15.25■□□□□ 0.03
TREM1-201ENST00000244709 LARP1Q6PKG0 1096 aaKnown RBP15.25■□□□□ 0.03
TREM1-201ENST00000244709 PLEKHF1Q96S99 279 aa15.25■□□□□ 0.03
TREM1-201ENST00000244709 TOM1L2Q6ZVM7 507 aa15.24■□□□□ 0.03
TREM1-201ENST00000244709 RUNDC1Q96C34 613 aa15.24■□□□□ 0.03
TREM1-201ENST00000244709 NGLY1Q96IV0 654 aa15.24■□□□□ 0.03
TREM1-201ENST00000244709 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.24■□□□□ 0.03
TREM1-201ENST00000244709 CRB1P82279 1406 aa15.23■□□□□ 0.03
TREM1-201ENST00000244709 PNNQ9H307 717 aaKnown RBP15.22■□□□□ 0.03
TREM1-201ENST00000244709 BCL9LQ86UU0 1499 aa15.22■□□□□ 0.03
TREM1-201ENST00000244709 HNRNPUQ00839 825 aaKnown RBP eCLIP15.22■□□□□ 0.03
TREM1-201ENST00000244709 WNK3Q9BYP7 1800 aa15.21■□□□□ 0.03
TREM1-201ENST00000244709 DLG5Q8TDM6 1919 aa15.21■□□□□ 0.03
TREM1-201ENST00000244709 FNBP4Q8N3X1 1017 aaPredicted RBP15.21■□□□□ 0.03
TREM1-201ENST00000244709 PHACTR3Q96KR7 559 aa15.21■□□□□ 0.03
TREM1-201ENST00000244709 CARD10Q9BWT7 1032 aa15.21■□□□□ 0.03
TREM1-201ENST00000244709 MAPK8IP3Q9UPT6 1336 aa15.21■□□□□ 0.02
TREM1-201ENST00000244709 PARP4Q9UKK3 1724 aaKnown RBP15.2■□□□□ 0.02
TREM1-201ENST00000244709 APAF1O14727 1248 aa15.2■□□□□ 0.02
TREM1-201ENST00000244709 UNC5CLQ8IV45 518 aa15.2■□□□□ 0.02
TREM1-201ENST00000244709 MEGF6O75095 1541 aa15.2■□□□□ 0.02
TREM1-201ENST00000244709 TCP11L2Q8N4U5 519 aa15.19■□□□□ 0.02
TREM1-201ENST00000244709 NEFMP07197 916 aa15.19■□□□□ 0.02
TREM1-201ENST00000244709 USP35Q9P2H5 1018 aa15.19■□□□□ 0.02
TREM1-201ENST00000244709 AFF2P51816 1311 aa15.18■□□□□ 0.02
TREM1-201ENST00000244709 USP21Q9UK80 565 aa15.18■□□□□ 0.02
TREM1-201ENST00000244709 RRP7AQ9Y3A4 280 aaKnown RBP15.18■□□□□ 0.02
TREM1-201ENST00000244709 PKD1L3Q7Z443 1732 aa15.17■□□□□ 0.02
TREM1-201ENST00000244709 SALL2Q9Y467 1007 aaPredicted RBP15.17■□□□□ 0.02
TREM1-201ENST00000244709 RAPGEF4Q8WZA2 1011 aa15.16■□□□□ 0.02
TREM1-201ENST00000244709 TATP17735 454 aaPredicted RBP15.16■□□□□ 0.02
TREM1-201ENST00000244709 TMPOP42166 694 aaKnown RBP15.16■□□□□ 0.02
TREM1-201ENST00000244709 NEUROD2Q15784 382 aa15.16■□□□□ 0.02
TREM1-201ENST00000244709 VPS72Q15906 364 aa15.16■□□□□ 0.02
TREM1-201ENST00000244709 SPATA31A1Q5TZJ5 1347 aa15.15■□□□□ 0.02
TREM1-201ENST00000244709 SPATA31A5Q5VU36 1347 aa15.15■□□□□ 0.02
TREM1-201ENST00000244709 SPATA31A7Q8IWB4 1347 aa15.15■□□□□ 0.02
TREM1-201ENST00000244709 NFE2L2Q16236 605 aa15.15■□□□□ 0.02
TREM1-201ENST00000244709 MTHFSDQ2M296 383 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms