RNA–Protein interactions for RNA: ENST00000243662.10

RAB38-201, Transcript of RAB38, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB38, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-201ENST00000243662 POTEAQ6S8J7 498 aa21.27■■□□□ 1
RAB38-201ENST00000243662 PEAK1Q9H792 1746 aa21.27■■□□□ 1
RAB38-201ENST00000243662 COL5A2P05997 1499 aaPredicted RBP21.27■□□□□ 0.99
RAB38-201ENST00000243662 AXIN2Q9Y2T1 843 aa21.26■□□□□ 0.99
RAB38-201ENST00000243662 MAP3K19Q56UN5 1328 aa21.25■□□□□ 0.99
RAB38-201ENST00000243662 TRPC5Q9UL62 973 aaPredicted RBP21.24■□□□□ 0.99
RAB38-201ENST00000243662 GLI3P10071 1580 aa21.24■□□□□ 0.99
RAB38-201ENST00000243662 ZBTB7CA1YPR0 619 aa21.23■□□□□ 0.99
RAB38-201ENST00000243662 DDX10Q13206 875 aaKnown RBP21.23■□□□□ 0.99
RAB38-201ENST00000243662 QTRT2Q9H974 415 aaKnown RBP21.23■□□□□ 0.99
RAB38-201ENST00000243662 RRS1Q15050 365 aaKnown RBP21.22■□□□□ 0.99
RAB38-201ENST00000243662 VPS72Q15906 364 aa21.22■□□□□ 0.99
RAB38-201ENST00000243662 RTL1A6NKG5 1358 aa21.22■□□□□ 0.99
RAB38-201ENST00000243662 KIF24Q5T7B8 1368 aa21.22■□□□□ 0.99
RAB38-201ENST00000243662 BLMP54132 1417 aaPredicted RBP21.21■□□□□ 0.99
RAB38-201ENST00000243662 IP6K1Q92551 441 aa21.21■□□□□ 0.99
RAB38-201ENST00000243662 MORC1Q86VD1 984 aa21.2■□□□□ 0.98
RAB38-201ENST00000243662 SMG6Q86US8 1419 aaKnown RBP21.2■□□□□ 0.98
RAB38-201ENST00000243662 CC2D1BQ5T0F9 858 aaKnown RBP21.2■□□□□ 0.98
RAB38-201ENST00000243662 FAM208AQ9UK61 1670 aaKnown RBP21.19■□□□□ 0.98
RAB38-201ENST00000243662 HOXC9P31274 260 aa21.19■□□□□ 0.98
RAB38-201ENST00000243662 POLKQ9UBT6 870 aa21.19■□□□□ 0.98
RAB38-201ENST00000243662 EMILIN1Q9Y6C2 1016 aa21.19■□□□□ 0.98
RAB38-201ENST00000243662 GJD4Q96KN9 370 aaPredicted RBP21.18■□□□□ 0.98
RAB38-201ENST00000243662 STRN4Q9NRL3 753 aa21.18■□□□□ 0.98
RAB38-201ENST00000243662 RGPD2P0DJD1 1756 aa21.17■□□□□ 0.98
RAB38-201ENST00000243662 TNNT2P45379 298 aaPredicted RBP21.17■□□□□ 0.98
RAB38-201ENST00000243662 RBM6P78332 1123 aaKnown RBP21.17■□□□□ 0.98
RAB38-201ENST00000243662 LARP1Q6PKG0 1096 aaKnown RBP21.17■□□□□ 0.98
RAB38-201ENST00000243662 ERBB3P21860 1342 aa21.17■□□□□ 0.98
RAB38-201ENST00000243662 SPATA31A5Q5VU36 1347 aa21.17■□□□□ 0.98
RAB38-201ENST00000243662 SPATA31A7Q8IWB4 1347 aa21.17■□□□□ 0.98
RAB38-201ENST00000243662 WDR17Q8IZU2 1322 aa21.17■□□□□ 0.98
RAB38-201ENST00000243662 FLT4P35916 1363 aa21.17■□□□□ 0.98
RAB38-201ENST00000243662 AMPHP49418 695 aa21.16■□□□□ 0.98
RAB38-201ENST00000243662 EVA1CP58658 441 aa21.16■□□□□ 0.98
RAB38-201ENST00000243662 CRB1P82279 1406 aa21.16■□□□□ 0.98
RAB38-201ENST00000243662 CDK12Q9NYV4 1490 aaPredicted RBP21.16■□□□□ 0.98
RAB38-201ENST00000243662 WNK3Q9BYP7 1800 aa21.15■□□□□ 0.98
RAB38-201ENST00000243662 RXRBP28702 533 aa21.15■□□□□ 0.98
RAB38-201ENST00000243662 INSRP06213 1382 aa21.14■□□□□ 0.98
RAB38-201ENST00000243662 SPATA31A1Q5TZJ5 1347 aa21.14■□□□□ 0.98
RAB38-201ENST00000243662 THSD7AQ9UPZ6 1657 aa21.13■□□□□ 0.97
RAB38-201ENST00000243662 HSP90AB2PQ58FF8 381 aa21.13■□□□□ 0.97
RAB38-201ENST00000243662 ANKRD24Q8TF21 1146 aa21.13■□□□□ 0.97
RAB38-201ENST00000243662 CCDC9Q9Y3X0 531 aaKnown RBP21.12■□□□□ 0.97
RAB38-201ENST00000243662 PARD3Q8TEW0 1356 aa21.11■□□□□ 0.97
RAB38-201ENST00000243662 ONECUT3O60422 494 aaPredicted RBP21.11■□□□□ 0.97
RAB38-201ENST00000243662 RGS12O14924 1447 aa21.11■□□□□ 0.97
RAB38-201ENST00000243662 BRWD3Q6RI45 1802 aa21.11■□□□□ 0.97
RAB38-201ENST00000243662 CNGB1Q14028 1251 aaPredicted RBP21.1■□□□□ 0.97
RAB38-201ENST00000243662 TOM1L2Q6ZVM7 507 aa21.09■□□□□ 0.97
RAB38-201ENST00000243662 ILDR2Q71H61 639 aa21.09■□□□□ 0.97
RAB38-201ENST00000243662 CARD10Q9BWT7 1032 aa21.09■□□□□ 0.97
RAB38-201ENST00000243662 PPM1GO15355 546 aaPredicted RBP21.08■□□□□ 0.97
RAB38-201ENST00000243662 CSB-PGBD3P0DP91 1061 aa21.08■□□□□ 0.97
RAB38-201ENST00000243662 THRAP3Q9Y2W1 955 aaKnown RBP21.08■□□□□ 0.97
RAB38-201ENST00000243662 PARP4Q9UKK3 1724 aaKnown RBP21.08■□□□□ 0.96
RAB38-201ENST00000243662 BARGINQ6ZT62 677 aa21.07■□□□□ 0.96
RAB38-201ENST00000243662 TCP11L2Q8N4U5 519 aa21.07■□□□□ 0.96
RAB38-201ENST00000243662 MTHFSP49914 203 aa21.07■□□□□ 0.96
RAB38-201ENST00000243662 LTV1Q96GA3 475 aaPredicted RBP21.07■□□□□ 0.96
RAB38-201ENST00000243662 USP35Q9P2H5 1018 aa21.06■□□□□ 0.96
RAB38-201ENST00000243662 DISP2A7MBM2 1401 aa21.05■□□□□ 0.96
RAB38-201ENST00000243662 NCAPD2Q15021 1401 aa21.05■□□□□ 0.96
RAB38-201ENST00000243662 FAM98CQ17RN3 349 aaKnown RBP21.05■□□□□ 0.96
RAB38-201ENST00000243662 RGPD1P0DJD0 1748 aa21.05■□□□□ 0.96
RAB38-201ENST00000243662 COL3A1P02461 1466 aaPredicted RBP21.04■□□□□ 0.96
RAB38-201ENST00000243662 PPP2R1AP30153 589 aa21.04■□□□□ 0.96
RAB38-201ENST00000243662 NLRP2Q9NX02 1062 aa21.04■□□□□ 0.96
RAB38-201ENST00000243662 LRRC37A3O60309 1634 aa21.03■□□□□ 0.96
RAB38-201ENST00000243662 EIF4A2Q14240 407 aaKnown RBP21.03■□□□□ 0.96
RAB38-201ENST00000243662 NBPF6Q5VWK0 638 aa21.02■□□□□ 0.96
RAB38-201ENST00000243662 NBPF4Q96M43 638 aa21.02■□□□□ 0.96
RAB38-201ENST00000243662 RALBP1Q15311 655 aa21.01■□□□□ 0.95
RAB38-201ENST00000243662 SEPT12Q8IYM1 358 aa21.01■□□□□ 0.95
RAB38-201ENST00000243662 EYA1Q99502 592 aa20.99■□□□□ 0.95
RAB38-201ENST00000243662 PRKRIP1Q9H875 184 aaPredicted RBP20.99■□□□□ 0.95
RAB38-201ENST00000243662 IL13P35225 146 aa20.98■□□□□ 0.95
RAB38-201ENST00000243662 YTHDC1Q96MU7 727 aaKnown RBP20.98■□□□□ 0.95
RAB38-201ENST00000243662 IGSF1Q8N6C5 1336 aa20.98■□□□□ 0.95
RAB38-201ENST00000243662 CDCA7Q9BWT1 371 aaPredicted RBP20.97■□□□□ 0.95
RAB38-201ENST00000243662 SHANK3Q9BYB0 1731 aa20.97■□□□□ 0.95
RAB38-201ENST00000243662 USHBP1Q8N6Y0 703 aa20.96■□□□□ 0.95
RAB38-201ENST00000243662 MEGF6O75095 1541 aa20.96■□□□□ 0.95
RAB38-201ENST00000243662 IL2RBP14784 551 aa20.95■□□□□ 0.94
RAB38-201ENST00000243662 GTF3C3Q9Y5Q9 886 aa20.94■□□□□ 0.94
RAB38-201ENST00000243662 PKD1L3Q7Z443 1732 aa20.94■□□□□ 0.94
RAB38-201ENST00000243662 TNS2Q63HR2 1409 aa20.94■□□□□ 0.94
RAB38-201ENST00000243662 MYBBP1AQ9BQG0 1328 aaKnown RBP20.94■□□□□ 0.94
RAB38-201ENST00000243662 A0A0G2JS52 829 aa20.94■□□□□ 0.94
RAB38-201ENST00000243662 DIAPH1O60610 1272 aaKnown RBP20.94■□□□□ 0.94
RAB38-201ENST00000243662 MYT1Q01538 1121 aa20.94■□□□□ 0.94
RAB38-201ENST00000243662 OVOS2A0A0G2JMS6 1433 aa20.93■□□□□ 0.94
RAB38-201ENST00000243662 KDRP35968 1356 aa20.92■□□□□ 0.94
RAB38-201ENST00000243662 KRT27Q7Z3Y8 459 aa20.92■□□□□ 0.94
RAB38-201ENST00000243662 DDB1Q16531 1140 aa20.91■□□□□ 0.94
RAB38-201ENST00000243662 CFAP53Q96M91 514 aa20.91■□□□□ 0.94
RAB38-201ENST00000243662 PLEKHG2Q9H7P9 1386 aa20.9■□□□□ 0.94
RAB38-201ENST00000243662 EP400Q96L91 3159 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms