RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 CCDC192P0DO97 292 aa8.93□□□□□ -0.98
RIF1-201ENST00000243326 TTC5Q8N0Z6 440 aa8.93□□□□□ -0.98
RIF1-201ENST00000243326 LIG1P18858 919 aa8.93□□□□□ -0.98
RIF1-201ENST00000243326 ZHX3Q9H4I2 956 aa8.93□□□□□ -0.98
RIF1-201ENST00000243326 RALYLQ86SE5 291 aaKnown RBP8.93□□□□□ -0.98
RIF1-201ENST00000243326 CFTRP13569 1480 aa8.93□□□□□ -0.98
RIF1-201ENST00000243326 CT47A1Q5JQC4 288 aaPredicted RBP8.93□□□□□ -0.98
RIF1-201ENST00000243326 MBD3O95983 291 aa8.93□□□□□ -0.98
RIF1-201ENST00000243326 NUP62CLQ9H1M0 184 aa8.93□□□□□ -0.98
RIF1-201ENST00000243326 MYL6BP14649 208 aa8.93□□□□□ -0.98
RIF1-201ENST00000243326 ANKRD62A6NC57 917 aa8.92□□□□□ -0.98
RIF1-201ENST00000243326 NUP133Q8WUM0 1156 aa8.92□□□□□ -0.98
RIF1-201ENST00000243326 TSC1Q92574 1164 aa8.92□□□□□ -0.98
RIF1-201ENST00000243326 CYP46A1Q9Y6A2 500 aa8.92□□□□□ -0.98
RIF1-201ENST00000243326 RNF187Q5TA31 235 aaPredicted RBP8.92□□□□□ -0.98
RIF1-201ENST00000243326 CASTP20810 708 aaKnown RBP8.92□□□□□ -0.98
RIF1-201ENST00000243326 DHX8Q14562 1220 aaKnown RBP8.92□□□□□ -0.98
RIF1-201ENST00000243326 SPATA32Q96LK8 384 aa8.92□□□□□ -0.98
RIF1-201ENST00000243326 BBXQ8WY36 941 aaPredicted RBP8.92□□□□□ -0.98
RIF1-201ENST00000243326 MVPQ14764 893 aaKnown RBP8.92□□□□□ -0.98
RIF1-201ENST00000243326 HOOK1Q9UJC3 728 aaKnown RBP8.92□□□□□ -0.98
RIF1-201ENST00000243326 ATP2C2O75185 946 aa8.92□□□□□ -0.98
RIF1-201ENST00000243326 CPLX2Q6PUV4 134 aaKnown RBP8.92□□□□□ -0.98
RIF1-201ENST00000243326 GNAI1P63096 354 aa8.92□□□□□ -0.98
RIF1-201ENST00000243326 SEC24BO95487 1268 aa8.91□□□□□ -0.98
RIF1-201ENST00000243326 TCEAL9Q9UHQ7 104 aa8.91□□□□□ -0.98
RIF1-201ENST00000243326 SMARCA2P51531 1590 aa8.91□□□□□ -0.98
RIF1-201ENST00000243326 URI1O94763 535 aaPredicted RBP8.91□□□□□ -0.98
RIF1-201ENST00000243326 XRCC6P12956 609 aaKnown RBP eCLIP8.91□□□□□ -0.988e-6■■□□□ 12.6
RIF1-201ENST00000243326 ATRXP46100 2492 aa8.91□□□□□ -0.98
RIF1-201ENST00000243326 ATP2B2Q01814 1243 aa8.91□□□□□ -0.98
RIF1-201ENST00000243326 FBLN1P23142 703 aa8.91□□□□□ -0.98
RIF1-201ENST00000243326 NINLQ9Y2I6 1382 aa8.91□□□□□ -0.98
RIF1-201ENST00000243326 SAFBQ15424 915 aaKnown RBP eCLIP8.91□□□□□ -0.984e-7■□□□□ 10.5
RIF1-201ENST00000243326 ARAP1Q96P48 1450 aa8.91□□□□□ -0.98
RIF1-201ENST00000243326 EPS15P42566 896 aa8.91□□□□□ -0.98
RIF1-201ENST00000243326 EVA1CP58658 441 aa8.91□□□□□ -0.98
RIF1-201ENST00000243326 PRPF40BQ6NWY9 871 aaKnown RBP8.91□□□□□ -0.98
RIF1-201ENST00000243326 GIMAP6Q6P9H5 292 aa8.91□□□□□ -0.98
RIF1-201ENST00000243326 PDS5BQ9NTI5 1447 aa8.91□□□□□ -0.98
RIF1-201ENST00000243326 LETM1O95202 739 aaPredicted RBP8.91□□□□□ -0.98
RIF1-201ENST00000243326 TTC12Q9H892 705 aaPredicted RBP8.91□□□□□ -0.98
RIF1-201ENST00000243326 OFD1O75665 1012 aa8.9□□□□□ -0.98
RIF1-201ENST00000243326 KLHL10Q6JEL2 608 aa8.9□□□□□ -0.98
RIF1-201ENST00000243326 ACBD3Q9H3P7 528 aa8.9□□□□□ -0.98
RIF1-201ENST00000243326 KIAA0754O94854 1291 aa8.9□□□□□ -0.98
RIF1-201ENST00000243326 ERICH2A1L162 156 aa8.9□□□□□ -0.98
RIF1-201ENST00000243326 ADCY5O95622 1261 aa8.9□□□□□ -0.98
RIF1-201ENST00000243326 SULT6B1Q6IMI4 303 aa8.9□□□□□ -0.98
RIF1-201ENST00000243326 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.9□□□□□ -0.982e-8■■■■■ 177.7
RIF1-201ENST00000243326 NEFHP12036 1026 aa8.9□□□□□ -0.98
RIF1-201ENST00000243326 LRRCC1Q9C099 1032 aa8.9□□□□□ -0.98
RIF1-201ENST00000243326 SLFN5Q08AF3 891 aa8.9□□□□□ -0.98
RIF1-201ENST00000243326 CLIP2Q9UDT6 1046 aa8.9□□□□□ -0.98
RIF1-201ENST00000243326 ATF7IPQ6VMQ6 1270 aa8.9□□□□□ -0.98
RIF1-201ENST00000243326 PSMA5P28066 241 aa8.9□□□□□ -0.99
RIF1-201ENST00000243326 CCDC144CPQ8IYA2 1237 aa8.9□□□□□ -0.99
RIF1-201ENST00000243326 RAI14Q9P0K7 980 aa8.9□□□□□ -0.99
RIF1-201ENST00000243326 ODF2Q5BJF6 829 aa8.9□□□□□ -0.99
RIF1-201ENST00000243326 TERF1P54274 439 aa8.9□□□□□ -0.99
RIF1-201ENST00000243326 KRT85P78386 507 aa8.9□□□□□ -0.99
RIF1-201ENST00000243326 GNAI2P04899 355 aa8.89□□□□□ -0.99
RIF1-201ENST00000243326 SPG7Q9UQ90 795 aa8.89□□□□□ -0.99
RIF1-201ENST00000243326 CARMIL2Q6F5E8 1435 aa8.89□□□□□ -0.99
RIF1-201ENST00000243326 CCT2P78371 535 aaKnown RBP8.89□□□□□ -0.99
RIF1-201ENST00000243326 NCOA2Q15596 1464 aa8.89□□□□□ -0.99
RIF1-201ENST00000243326 TTC39AQ5SRH9 613 aa8.89□□□□□ -0.99
RIF1-201ENST00000243326 AACSQ86V21 672 aa8.89□□□□□ -0.99
RIF1-201ENST00000243326 SEPT11Q9NVA2 429 aaKnown RBP8.89□□□□□ -0.99
RIF1-201ENST00000243326 FKBP4Q02790 459 aaKnown RBP eCLIP8.89□□□□□ -0.99
RIF1-201ENST00000243326 MCM10Q7L590 875 aa8.89□□□□□ -0.99
RIF1-201ENST00000243326 CCDC82Q8N4S0 544 aa8.89□□□□□ -0.99
RIF1-201ENST00000243326 FAM107BQ9H098 131 aa8.89□□□□□ -0.99
RIF1-201ENST00000243326 BCCIPQ9P287 314 aaKnown RBP eCLIP8.89□□□□□ -0.99
RIF1-201ENST00000243326 SLC4A8Q2Y0W8 1093 aa8.89□□□□□ -0.99
RIF1-201ENST00000243326 MTERF4Q7Z6M4 381 aaKnown RBP8.89□□□□□ -0.99
RIF1-201ENST00000243326 WDR33Q9C0J8 1336 aaKnown RBP8.89□□□□□ -0.99
RIF1-201ENST00000243326 HDGFP51858 240 aaKnown RBP8.89□□□□□ -0.99
RIF1-201ENST00000243326 MAP3K11Q16584 847 aa8.89□□□□□ -0.99
RIF1-201ENST00000243326 USHBP1Q8N6Y0 703 aa8.89□□□□□ -0.99
RIF1-201ENST00000243326 NECAB1Q8N987 351 aa8.89□□□□□ -0.99
RIF1-201ENST00000243326 ERBINQ96RT1 1412 aa8.89□□□□□ -0.99
RIF1-201ENST00000243326 SSBP05455 408 aaKnown RBP eCLIP8.89□□□□□ -0.99
RIF1-201ENST00000243326 FAM170AA1A519 330 aa8.88□□□□□ -0.99
RIF1-201ENST00000243326 CCDC113Q9H0I3 377 aa8.88□□□□□ -0.99
RIF1-201ENST00000243326 CCDC181Q5TID7 509 aa8.88□□□□□ -0.99
RIF1-201ENST00000243326 CCDC191Q8NCU4 936 aa8.88□□□□□ -0.99
RIF1-201ENST00000243326 SSH1Q8WYL5 1049 aa8.88□□□□□ -0.99
RIF1-201ENST00000243326 CCDC47Q96A33 483 aaKnown RBP8.88□□□□□ -0.99
RIF1-201ENST00000243326 CNPY2Q9Y2B0 182 aa8.88□□□□□ -0.99
RIF1-201ENST00000243326 ZSCAN23Q3MJ62 389 aa8.88□□□□□ -0.99
RIF1-201ENST00000243326 PPFIBP1Q86W92 1011 aa8.88□□□□□ -0.99
RIF1-201ENST00000243326 PDCL3Q9H2J4 239 aa8.88□□□□□ -0.99
RIF1-201ENST00000243326 ROCK1Q13464 1354 aa8.88□□□□□ -0.99
RIF1-201ENST00000243326 IKQ13123 557 aaPredicted RBP8.88□□□□□ -0.99
RIF1-201ENST00000243326 TANGO6Q9C0B7 1094 aa8.88□□□□□ -0.99
RIF1-201ENST00000243326 MAGEC2Q9UBF1 373 aaPredicted RBP8.88□□□□□ -0.99
RIF1-201ENST00000243326 RABEP2Q9H5N1 569 aa8.88□□□□□ -0.99
RIF1-201ENST00000243326 BAG4O95429 457 aaKnown RBP8.88□□□□□ -0.99
RIF1-201ENST00000243326 NLRP2Q9NX02 1062 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms