RNA–Protein interactions for RNA: ENST00000243077.7

LRP1-201, Transcript of LDL receptor related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP1, Length 14,897 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-201ENST00000243077 PRKCSHP14314 528 aaPredicted RBP10.63□□□□□ -0.71
LRP1-201ENST00000243077 CCDC91Q7Z6B0 441 aa10.63□□□□□ -0.71
LRP1-201ENST00000243077 STK38Q15208 465 aa10.62□□□□□ -0.71
LRP1-201ENST00000243077 WASHC4Q2M389 1173 aa10.62□□□□□ -0.71
LRP1-201ENST00000243077 KAT6BQ8WYB5 2073 aa10.62□□□□□ -0.71
LRP1-201ENST00000243077 POTEJP0CG39 1038 aa10.62□□□□□ -0.71
LRP1-201ENST00000243077 TDRD9Q8NDG6 1382 aaKnown RBP10.62□□□□□ -0.71
LRP1-201ENST00000243077 RBM33Q96EV2 1170 aaKnown RBP10.62□□□□□ -0.71
LRP1-201ENST00000243077 AKNAQ7Z591 1439 aa10.62□□□□□ -0.71
LRP1-201ENST00000243077 ELL2O00472 640 aaPredicted RBP10.62□□□□□ -0.71
LRP1-201ENST00000243077 LARP1BQ659C4 914 aaKnown RBP10.62□□□□□ -0.71
LRP1-201ENST00000243077 ADAMTS8Q9UP79 889 aa10.62□□□□□ -0.71
LRP1-201ENST00000243077 ATF7IPQ6VMQ6 1270 aa10.61□□□□□ -0.71
LRP1-201ENST00000243077 PPP1R12BO60237 982 aaPredicted RBP10.61□□□□□ -0.71
LRP1-201ENST00000243077 ALDH1L2Q3SY69 923 aa10.61□□□□□ -0.71
LRP1-201ENST00000243077 NF2P35240 595 aa10.61□□□□□ -0.71
LRP1-201ENST00000243077 MVPQ14764 893 aaKnown RBP10.61□□□□□ -0.71
LRP1-201ENST00000243077 CCDC181Q5TID7 509 aa10.61□□□□□ -0.71
LRP1-201ENST00000243077 SLC4A3P48751 1232 aa10.61□□□□□ -0.71
LRP1-201ENST00000243077 UVSSAQ2YD98 709 aa10.61□□□□□ -0.71
LRP1-201ENST00000243077 VPS36Q86VN1 386 aa10.61□□□□□ -0.71
LRP1-201ENST00000243077 FSD1Q9BTV5 496 aa10.61□□□□□ -0.71
LRP1-201ENST00000243077 GTPBP4Q9BZE4 634 aaKnown RBP10.61□□□□□ -0.71
LRP1-201ENST00000243077 MTHFSP49914 203 aa10.61□□□□□ -0.71
LRP1-201ENST00000243077 KIF6Q6ZMV9 814 aa10.61□□□□□ -0.71
LRP1-201ENST00000243077 PAXBP1Q9Y5B6 917 aa10.61□□□□□ -0.71
LRP1-201ENST00000243077 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.6□□□□□ -0.71
LRP1-201ENST00000243077 GPRASP1Q5JY77 1395 aa10.6□□□□□ -0.71
LRP1-201ENST00000243077 AXDND1Q5T1B0 1012 aaPredicted RBP10.6□□□□□ -0.71
LRP1-201ENST00000243077 LUZP1Q86V48 1076 aa10.6□□□□□ -0.71
LRP1-201ENST00000243077 ANKRD50Q9ULJ7 1429 aa10.6□□□□□ -0.71
LRP1-201ENST00000243077 JAKMIP3Q5VZ66 844 aa10.6□□□□□ -0.71
LRP1-201ENST00000243077 FOXD4L6Q3SYB3 417 aaPredicted RBP10.6□□□□□ -0.71
LRP1-201ENST00000243077 FOXD4L3Q6VB84 417 aaPredicted RBP10.6□□□□□ -0.71
LRP1-201ENST00000243077 FGD6Q6ZV73 1430 aa10.6□□□□□ -0.71
LRP1-201ENST00000243077 FHOD3Q2V2M9 1422 aa10.6□□□□□ -0.71
LRP1-201ENST00000243077 PDCL3Q9H2J4 239 aa10.6□□□□□ -0.71
LRP1-201ENST00000243077 CCDC9Q9Y3X0 531 aaKnown RBP10.6□□□□□ -0.71
LRP1-201ENST00000243077 TCP11L2Q8N4U5 519 aa10.6□□□□□ -0.71
LRP1-201ENST00000243077 ANO10Q9NW15 660 aa10.6□□□□□ -0.71
LRP1-201ENST00000243077 KANK3Q6NY19 840 aa10.6□□□□□ -0.71
LRP1-201ENST00000243077 CCDC183Q5T5S1 534 aa10.59□□□□□ -0.71
LRP1-201ENST00000243077 CGNQ9P2M7 1197 aaKnown RBP10.59□□□□□ -0.71
LRP1-201ENST00000243077 CASKIN1Q8WXD9 1431 aa10.59□□□□□ -0.71
LRP1-201ENST00000243077 KIF20AO95235 890 aa10.59□□□□□ -0.71
LRP1-201ENST00000243077 CHD1LQ86WJ1 897 aa10.59□□□□□ -0.71
LRP1-201ENST00000243077 EPB41L2O43491 1005 aaKnown RBP10.59□□□□□ -0.71
LRP1-201ENST00000243077 MAP3K11Q16584 847 aa10.59□□□□□ -0.71
LRP1-201ENST00000243077 KIF21BO75037 1637 aa10.59□□□□□ -0.71
LRP1-201ENST00000243077 PPP2R1AP30153 589 aa10.59□□□□□ -0.71
LRP1-201ENST00000243077 ME1P48163 572 aa10.59□□□□□ -0.71
LRP1-201ENST00000243077 EHBP1Q8NDI1 1231 aa10.59□□□□□ -0.71
LRP1-201ENST00000243077 DYDC1Q8WWB3 177 aa10.59□□□□□ -0.71
LRP1-201ENST00000243077 TAOK3Q9H2K8 898 aa10.59□□□□□ -0.71
LRP1-201ENST00000243077 CRACR2AQ9BSW2 395 aa10.58□□□□□ -0.71
LRP1-201ENST00000243077 TMCO3Q6UWJ1 677 aa10.58□□□□□ -0.72
LRP1-201ENST00000243077 FILIP1Q7Z7B0 1213 aa10.58□□□□□ -0.72
LRP1-201ENST00000243077 PRIMPOLQ96LW4 560 aa10.58□□□□□ -0.72
LRP1-201ENST00000243077 NUP62CLQ9H1M0 184 aa10.58□□□□□ -0.72
LRP1-201ENST00000243077 PDZRN3Q9UPQ7 1066 aa10.58□□□□□ -0.72
LRP1-201ENST00000243077 SPATA32Q96LK8 384 aa10.58□□□□□ -0.72
LRP1-201ENST00000243077 NAA15Q9BXJ9 866 aaKnown RBP10.58□□□□□ -0.72
LRP1-201ENST00000243077 UPF3BQ9BZI7 483 aaKnown RBP10.58□□□□□ -0.72
LRP1-201ENST00000243077 BLOC1S2Q6QNY1 142 aa10.58□□□□□ -0.72
LRP1-201ENST00000243077 ATF3P18847 181 aa10.58□□□□□ -0.72
LRP1-201ENST00000243077 NEUROD6Q96NK8 337 aa10.58□□□□□ -0.72
LRP1-201ENST00000243077 SFPQP23246 707 aaKnown RBP eCLIP10.58□□□□□ -0.72
LRP1-201ENST00000243077 RAB34Q9BZG1 259 aa10.58□□□□□ -0.72
LRP1-201ENST00000243077 A6NNZ2 444 aa10.58□□□□□ -0.72
LRP1-201ENST00000243077 KIF5CO60282 957 aa10.58□□□□□ -0.72
LRP1-201ENST00000243077 TUBB8Q3ZCM7 444 aa10.58□□□□□ -0.72
LRP1-201ENST00000243077 ZFYVE27Q5T4F4 411 aa10.57□□□□□ -0.72
LRP1-201ENST00000243077 PANK1Q8TE04 598 aa10.57□□□□□ -0.72
LRP1-201ENST00000243077 NEFHP12036 1026 aa10.57□□□□□ -0.72
LRP1-201ENST00000243077 TAF4BQ92750 862 aa10.57□□□□□ -0.72
LRP1-201ENST00000243077 IGF1RP08069 1367 aa10.57□□□□□ -0.72
LRP1-201ENST00000243077 GLRX3O76003 335 aaKnown RBP10.57□□□□□ -0.72
LRP1-201ENST00000243077 DYNC1I1O14576 645 aa10.57□□□□□ -0.72
LRP1-201ENST00000243077 HS1BP3Q53T59 392 aa10.57□□□□□ -0.72
LRP1-201ENST00000243077 PTPN14Q15678 1187 aa10.57□□□□□ -0.72
LRP1-201ENST00000243077 AKAP2Q9Y2D5 859 aa10.56□□□□□ -0.72
LRP1-201ENST00000243077 ABCC11Q96J66 1382 aa10.56□□□□□ -0.72
LRP1-201ENST00000243077 NOB1Q9ULX3 412 aaKnown RBP10.56□□□□□ -0.72
LRP1-201ENST00000243077 SPA17Q15506 151 aa10.56□□□□□ -0.72
LRP1-201ENST00000243077 CCDC69A6NI79 296 aa10.56□□□□□ -0.72
LRP1-201ENST00000243077 USO1O60763 962 aaKnown RBP10.56□□□□□ -0.72
LRP1-201ENST00000243077 TWISTNBQ3B726 338 aaPredicted RBP10.56□□□□□ -0.72
LRP1-201ENST00000243077 SOGA3Q5TF21 947 aa10.56□□□□□ -0.72
LRP1-201ENST00000243077 BBXQ8WY36 941 aaPredicted RBP10.56□□□□□ -0.72
LRP1-201ENST00000243077 ATAD2Q6PL18 1390 aa10.56□□□□□ -0.72
LRP1-201ENST00000243077 HOOK3Q86VS8 718 aa10.56□□□□□ -0.72
LRP1-201ENST00000243077 SHTN1A0MZ66 631 aa10.56□□□□□ -0.72
LRP1-201ENST00000243077 FMNL2Q96PY5 1086 aa10.56□□□□□ -0.72
LRP1-201ENST00000243077 GCOM1H8Y6P7 765 aaPredicted RBP10.55□□□□□ -0.72
LRP1-201ENST00000243077 MYZAPP0CAP1 466 aa10.55□□□□□ -0.72
LRP1-201ENST00000243077 PPM1EQ8WY54 764 aa10.55□□□□□ -0.72
LRP1-201ENST00000243077 ARHGAP29Q52LW3 1261 aa10.55□□□□□ -0.72
LRP1-201ENST00000243077 SRRTQ9BXP5 876 aaKnown RBP10.55□□□□□ -0.72
LRP1-201ENST00000243077 POLA1P09884 1462 aaPredicted RBP10.55□□□□□ -0.72
LRP1-201ENST00000243077 RNF214Q8ND24 703 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms