RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 NHSL1Q5SYE7 1610 aa24.57■■□□□ 1.52
SNX17-201ENST00000233575 RGPD1P0DJD0 1748 aa24.56■■□□□ 1.52
SNX17-201ENST00000233575 ZBTB7CA1YPR0 619 aa24.56■■□□□ 1.52
SNX17-201ENST00000233575 FCHSD2O94868 740 aa24.55■■□□□ 1.52
SNX17-201ENST00000233575 PRKAR2BP31323 418 aa24.55■■□□□ 1.52
SNX17-201ENST00000233575 CABLES1Q8TDN4 633 aa24.55■■□□□ 1.52
SNX17-201ENST00000233575 KIF24Q5T7B8 1368 aa24.54■■□□□ 1.52
SNX17-201ENST00000233575 ROBO1Q9Y6N7 1651 aa24.54■■□□□ 1.52
SNX17-201ENST00000233575 PHRF1Q9P1Y6 1649 aaKnown RBP24.54■■□□□ 1.52
SNX17-201ENST00000233575 AEBP1Q8IUX7 1158 aa24.54■■□□□ 1.52
SNX17-201ENST00000233575 CRYBG1Q9Y4K1 1723 aa24.53■■□□□ 1.52
SNX17-201ENST00000233575 ARHGEF25Q86VW2 580 aa24.52■■□□□ 1.52
SNX17-201ENST00000233575 RTL1A6NKG5 1358 aa24.52■■□□□ 1.52
SNX17-201ENST00000233575 MAPK8IP3Q9UPT6 1336 aa24.51■■□□□ 1.51
SNX17-201ENST00000233575 IP6K1Q92551 441 aa24.51■■□□□ 1.51
SNX17-201ENST00000233575 PHACTR3Q96KR7 559 aa24.51■■□□□ 1.51
SNX17-201ENST00000233575 ARHGEF10O15013 1369 aa24.51■■□□□ 1.51
SNX17-201ENST00000233575 PDE3BQ13370 1112 aa24.51■■□□□ 1.51
SNX17-201ENST00000233575 SULT6B1Q6IMI4 303 aa24.51■■□□□ 1.51
SNX17-201ENST00000233575 LTV1Q96GA3 475 aaPredicted RBP24.51■■□□□ 1.51
SNX17-201ENST00000233575 ZC3H6P61129 1189 aaKnown RBP24.5■■□□□ 1.51
SNX17-201ENST00000233575 GTF3C3Q9Y5Q9 886 aa24.5■■□□□ 1.51
SNX17-201ENST00000233575 WWC1Q8IX03 1113 aa24.49■■□□□ 1.51
SNX17-201ENST00000233575 TMPOP42166 694 aaKnown RBP24.48■■□□□ 1.51
SNX17-201ENST00000233575 EYA1Q99502 592 aa24.48■■□□□ 1.51
SNX17-201ENST00000233575 PNNQ9H307 717 aaKnown RBP24.47■■□□□ 1.51
SNX17-201ENST00000233575 SPINK5Q9NQ38 1064 aaPredicted RBP24.47■■□□□ 1.51
SNX17-201ENST00000233575 PHF23Q9BUL5 403 aaPredicted RBP24.47■■□□□ 1.51
SNX17-201ENST00000233575 GOLGA2Q08379 1002 aa24.46■■□□□ 1.51
SNX17-201ENST00000233575 NGEFQ8N5V2 710 aa24.46■■□□□ 1.51
SNX17-201ENST00000233575 AXIN2Q9Y2T1 843 aa24.45■■□□□ 1.51
SNX17-201ENST00000233575 IGSF1Q8N6C5 1336 aa24.45■■□□□ 1.51
SNX17-201ENST00000233575 RGPD5Q99666 1765 aa24.45■■□□□ 1.5
SNX17-201ENST00000233575 SUPT16HQ9Y5B9 1047 aaKnown RBP24.44■■□□□ 1.5
SNX17-201ENST00000233575 CCDC27Q2M243 656 aa24.43■■□□□ 1.5
SNX17-201ENST00000233575 TRIM35Q9UPQ4 493 aa24.43■■□□□ 1.5
SNX17-201ENST00000233575 RGPD2P0DJD1 1756 aa24.43■■□□□ 1.5
SNX17-201ENST00000233575 AHDC1Q5TGY3 1603 aaPredicted RBP24.42■■□□□ 1.5
SNX17-201ENST00000233575 RIPK4P57078 832 aa24.42■■□□□ 1.5
SNX17-201ENST00000233575 KDRP35968 1356 aa24.42■■□□□ 1.5
SNX17-201ENST00000233575 ABCA3Q99758 1704 aa24.41■■□□□ 1.5
SNX17-201ENST00000233575 NEFMP07197 916 aa24.41■■□□□ 1.5
SNX17-201ENST00000233575 SLFN5Q08AF3 891 aa24.41■■□□□ 1.5
SNX17-201ENST00000233575 DUSP27Q5VZP5 1158 aa24.4■■□□□ 1.5
SNX17-201ENST00000233575 USHBP1Q8N6Y0 703 aa24.4■■□□□ 1.5
SNX17-201ENST00000233575 COL18A1P39060 1754 aa24.4■■□□□ 1.5
SNX17-201ENST00000233575 KIAA0232Q92628 1395 aa24.4■■□□□ 1.5
SNX17-201ENST00000233575 PIP4K2BP78356 416 aa24.4■■□□□ 1.5
SNX17-201ENST00000233575 CHRNA2Q15822 529 aa24.4■■□□□ 1.5
SNX17-201ENST00000233575 NFE2L2Q16236 605 aa24.39■■□□□ 1.5
SNX17-201ENST00000233575 NCBP3Q53F19 620 aaKnown RBP24.39■■□□□ 1.5
SNX17-201ENST00000233575 NBPF6Q5VWK0 638 aa24.39■■□□□ 1.5
SNX17-201ENST00000233575 LRRC59Q96AG4 307 aaKnown RBP24.39■■□□□ 1.5
SNX17-201ENST00000233575 NBPF4Q96M43 638 aa24.39■■□□□ 1.5
SNX17-201ENST00000233575 DLG5Q8TDM6 1919 aa24.38■■□□□ 1.49
SNX17-201ENST00000233575 ANKRD24Q8TF21 1146 aa24.38■■□□□ 1.49
SNX17-201ENST00000233575 TOM1O60784 492 aa24.37■■□□□ 1.49
SNX17-201ENST00000233575 TRMT2AQ8IZ69 625 aaKnown RBP24.37■■□□□ 1.49
SNX17-201ENST00000233575 CPDO75976 1380 aa24.36■■□□□ 1.49
SNX17-201ENST00000233575 E9PSI1 815 aa24.35■■□□□ 1.49
SNX17-201ENST00000233575 WDR63Q8IWG1 891 aa24.35■■□□□ 1.49
SNX17-201ENST00000233575 UBAP1LF5GYI3 381 aa24.34■■□□□ 1.49
SNX17-201ENST00000233575 PHLPP1O60346 1717 aa24.34■■□□□ 1.49
SNX17-201ENST00000233575 ERBB3P21860 1342 aa24.34■■□□□ 1.49
SNX17-201ENST00000233575 HAP1P54257 671 aaPredicted RBP24.34■■□□□ 1.49
SNX17-201ENST00000233575 THUMPD2Q9BTF0 503 aaKnown RBP24.32■■□□□ 1.48
SNX17-201ENST00000233575 COL16A1Q07092 1604 aaPredicted RBP24.32■■□□□ 1.48
SNX17-201ENST00000233575 FAM83GA6ND36 823 aa24.31■■□□□ 1.48
SNX17-201ENST00000233575 MTHFSDQ2M296 383 aaKnown RBP24.31■■□□□ 1.48
SNX17-201ENST00000233575 PRDM11Q9NQV5 511 aa24.3■■□□□ 1.48
SNX17-201ENST00000233575 CAMTA1Q9Y6Y1 1673 aa24.3■■□□□ 1.48
SNX17-201ENST00000233575 ABCC6O95255 1503 aa24.29■■□□□ 1.48
SNX17-201ENST00000233575 RCAN3Q9UKA8 241 aa24.29■■□□□ 1.48
SNX17-201ENST00000233575 DCTN1Q14203 1278 aa24.28■■□□□ 1.48
SNX17-201ENST00000233575 NCAPD2Q15021 1401 aa24.28■■□□□ 1.48
SNX17-201ENST00000233575 LMO7Q8WWI1 1683 aa24.28■■□□□ 1.48
SNX17-201ENST00000233575 CERKQ8TCT0 537 aa24.27■■□□□ 1.48
SNX17-201ENST00000233575 COL22A1Q8NFW1 1626 aaPredicted RBP24.27■■□□□ 1.48
SNX17-201ENST00000233575 IRX6P78412 446 aaPredicted RBP24.27■■□□□ 1.48
SNX17-201ENST00000233575 TSR2Q969E8 191 aaKnown RBP24.26■■□□□ 1.47
SNX17-201ENST00000233575 FKBP8Q14318 412 aa24.25■■□□□ 1.47
SNX17-201ENST00000233575 NLRP2Q9NX02 1062 aa24.24■■□□□ 1.47
SNX17-201ENST00000233575 CSB-PGBD3P0DP91 1061 aa24.23■■□□□ 1.47
SNX17-201ENST00000233575 FAM208AQ9UK61 1670 aaKnown RBP24.23■■□□□ 1.47
SNX17-201ENST00000233575 IL16Q14005 1332 aa24.23■■□□□ 1.47
SNX17-201ENST00000233575 FANCIQ9NVI1 1328 aa24.23■■□□□ 1.47
SNX17-201ENST00000233575 LMOD3Q0VAK6 560 aa24.23■■□□□ 1.47
SNX17-201ENST00000233575 MCM10Q7L590 875 aa24.23■■□□□ 1.47
SNX17-201ENST00000233575 RNF123Q5XPI4 1314 aa24.22■■□□□ 1.47
SNX17-201ENST00000233575 GAS2L2Q8NHY3 880 aa24.22■■□□□ 1.47
SNX17-201ENST00000233575 MYH16Q9H6N6 1097 aa24.22■■□□□ 1.47
SNX17-201ENST00000233575 NEFLP07196 543 aa24.22■■□□□ 1.47
SNX17-201ENST00000233575 COL5A2P05997 1499 aaPredicted RBP24.21■■□□□ 1.47
SNX17-201ENST00000233575 LAS1LQ9Y4W2 734 aaKnown RBP24.2■■□□□ 1.47
SNX17-201ENST00000233575 WDR17Q8IZU2 1322 aa24.17■■□□□ 1.46
SNX17-201ENST00000233575 ZNF853P0CG23 659 aa24.16■■□□□ 1.46
SNX17-201ENST00000233575 RRP1P56182 461 aaKnown RBP24.16■■□□□ 1.46
SNX17-201ENST00000233575 STRN4Q9NRL3 753 aa24.16■■□□□ 1.46
SNX17-201ENST00000233575 MEGF6O75095 1541 aa24.16■■□□□ 1.46
SNX17-201ENST00000233575 CALD1Q05682 793 aaKnown RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms