RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 KIAA0232Q92628 1395 aa15.64■□□□□ 0.09
SF3B6-201ENST00000233468 TOPAZ1Q8N9V7 1692 aa15.64■□□□□ 0.09
SF3B6-201ENST00000233468 RGPD1P0DJD0 1748 aa15.64■□□□□ 0.09
SF3B6-201ENST00000233468 USP6P35125 1406 aa15.64■□□□□ 0.09
SF3B6-201ENST00000233468 ZC3H6P61129 1189 aaKnown RBP15.64■□□□□ 0.09
SF3B6-201ENST00000233468 NLRP13Q86W25 1043 aa15.64■□□□□ 0.09
SF3B6-201ENST00000233468 TNS1Q9HBL0 1735 aaKnown RBP15.64■□□□□ 0.09
SF3B6-201ENST00000233468 TTC21AQ8NDW8 1320 aa15.64■□□□□ 0.09
SF3B6-201ENST00000233468 BAG6P46379 1132 aa15.63■□□□□ 0.09
SF3B6-201ENST00000233468 STRN4Q9NRL3 753 aa15.63■□□□□ 0.09
SF3B6-201ENST00000233468 MKRN4PQ13434 485 aaPredicted RBP15.62■□□□□ 0.09
SF3B6-201ENST00000233468 SPATA31A1Q5TZJ5 1347 aa15.62■□□□□ 0.09
SF3B6-201ENST00000233468 LRP5O75197 1615 aa15.61■□□□□ 0.09
SF3B6-201ENST00000233468 CPSF1Q10570 1443 aaKnown RBP15.61■□□□□ 0.09
SF3B6-201ENST00000233468 TTC21BQ7Z4L5 1316 aa15.61■□□□□ 0.09
SF3B6-201ENST00000233468 NLRP6P59044 892 aa15.6■□□□□ 0.09
SF3B6-201ENST00000233468 POLR3GLQ9BT43 218 aa15.6■□□□□ 0.09
SF3B6-201ENST00000233468 USP35Q9P2H5 1018 aa15.6■□□□□ 0.09
SF3B6-201ENST00000233468 ANKRD36BQ8N2N9 1353 aa15.59■□□□□ 0.09
SF3B6-201ENST00000233468 CAMTA1Q9Y6Y1 1673 aa15.58■□□□□ 0.08
SF3B6-201ENST00000233468 TRIM37O94972 964 aa15.58■□□□□ 0.08
SF3B6-201ENST00000233468 EZH2Q15910 746 aaKnown RBP15.58■□□□□ 0.08
SF3B6-201ENST00000233468 EDC4Q6P2E9 1401 aaKnown RBP15.58■□□□□ 0.08
SF3B6-201ENST00000233468 SSH2Q76I76 1423 aa15.58■□□□□ 0.08
SF3B6-201ENST00000233468 NRKQ7Z2Y5 1582 aa15.58■□□□□ 0.08
SF3B6-201ENST00000233468 R3HDM1Q15032 1099 aaKnown RBP15.57■□□□□ 0.08
SF3B6-201ENST00000233468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.57■□□□□ 0.08
SF3B6-201ENST00000233468 KCNH5Q8NCM2 988 aa15.57■□□□□ 0.08
SF3B6-201ENST00000233468 A0A1W2PP64 1363 aa15.57■□□□□ 0.08
SF3B6-201ENST00000233468 LARP1Q6PKG0 1096 aaKnown RBP15.56■□□□□ 0.08
SF3B6-201ENST00000233468 LMO7Q8WWI1 1683 aa15.56■□□□□ 0.08
SF3B6-201ENST00000233468 USP19O94966 1318 aa15.55■□□□□ 0.08
SF3B6-201ENST00000233468 GCP02774 474 aa15.55■□□□□ 0.08
SF3B6-201ENST00000233468 EVA1CP58658 441 aa15.55■□□□□ 0.08
SF3B6-201ENST00000233468 CD163L1Q9NR16 1453 aa15.54■□□□□ 0.08
SF3B6-201ENST00000233468 DISP2A7MBM2 1401 aa15.54■□□□□ 0.08
SF3B6-201ENST00000233468 CAMKK2Q96RR4 588 aa15.54■□□□□ 0.08
SF3B6-201ENST00000233468 FAM196AQ6ZSG2 479 aa15.53■□□□□ 0.08
SF3B6-201ENST00000233468 USP31Q70CQ4 1352 aa15.52■□□□□ 0.08
SF3B6-201ENST00000233468 APBA3O96018 575 aa15.52■□□□□ 0.08
SF3B6-201ENST00000233468 COG3Q96JB2 828 aa15.52■□□□□ 0.08
SF3B6-201ENST00000233468 BARGINQ6ZT62 677 aa15.51■□□□□ 0.07
SF3B6-201ENST00000233468 NME9Q86XW9 330 aa15.51■□□□□ 0.07
SF3B6-201ENST00000233468 CPDO75976 1380 aa15.5■□□□□ 0.07
SF3B6-201ENST00000233468 ZBTB7CA1YPR0 619 aa15.5■□□□□ 0.07
SF3B6-201ENST00000233468 TCP11L2Q8N4U5 519 aa15.5■□□□□ 0.07
SF3B6-201ENST00000233468 NUP188Q5SRE5 1749 aa15.5■□□□□ 0.07
SF3B6-201ENST00000233468 RREB1Q92766 1687 aa15.5■□□□□ 0.07
SF3B6-201ENST00000233468 RGPD5Q99666 1765 aa15.49■□□□□ 0.07
SF3B6-201ENST00000233468 CGNL1Q0VF96 1302 aa15.49■□□□□ 0.07
SF3B6-201ENST00000233468 KIF7Q2M1P5 1343 aa15.49■□□□□ 0.07
SF3B6-201ENST00000233468 PDE3BQ13370 1112 aa15.49■□□□□ 0.07
SF3B6-201ENST00000233468 COL5A2P05997 1499 aaPredicted RBP15.48■□□□□ 0.07
SF3B6-201ENST00000233468 C11orf95C9JLR9 678 aaPredicted RBP15.48■□□□□ 0.07
SF3B6-201ENST00000233468 PANK3Q9H999 370 aa15.48■□□□□ 0.07
SF3B6-201ENST00000233468 PARP4Q9UKK3 1724 aaKnown RBP15.48■□□□□ 0.07
SF3B6-201ENST00000233468 SBF2Q86WG5 1849 aa15.47■□□□□ 0.07
SF3B6-201ENST00000233468 COL18A1P39060 1754 aa15.47■□□□□ 0.07
SF3B6-201ENST00000233468 PIK3C2AO00443 1686 aa15.47■□□□□ 0.07
SF3B6-201ENST00000233468 NSD3Q9BZ95 1437 aa15.46■□□□□ 0.07
SF3B6-201ENST00000233468 FYB1O15117 783 aa15.46■□□□□ 0.07
SF3B6-201ENST00000233468 SOX12O15370 315 aa15.46■□□□□ 0.07
SF3B6-201ENST00000233468 CARD14Q9BXL6 1004 aa15.46■□□□□ 0.07
SF3B6-201ENST00000233468 KNSTRNQ9Y448 316 aa15.46■□□□□ 0.07
SF3B6-201ENST00000233468 AKAP12Q02952 1782 aa15.46■□□□□ 0.07
SF3B6-201ENST00000233468 SPDYE2BA6NHP3 402 aa15.45■□□□□ 0.06
SF3B6-201ENST00000233468 SPDYE6P0CI01 402 aa15.45■□□□□ 0.06
SF3B6-201ENST00000233468 SPDYE2Q495Y8 402 aa15.45■□□□□ 0.06
SF3B6-201ENST00000233468 ARHGEF25Q86VW2 580 aa15.45■□□□□ 0.06
SF3B6-201ENST00000233468 AATKQ6ZMQ8 1374 aa15.45■□□□□ 0.06
SF3B6-201ENST00000233468 CCDC7Q96M83 1385 aa15.45■□□□□ 0.06
SF3B6-201ENST00000233468 PEAK1Q9H792 1746 aa15.45■□□□□ 0.06
SF3B6-201ENST00000233468 SLIT3O75094 1523 aa15.44■□□□□ 0.06
SF3B6-201ENST00000233468 MON2Q7Z3U7 1717 aa15.44■□□□□ 0.06
SF3B6-201ENST00000233468 PTF1AQ7RTS3 328 aa15.44■□□□□ 0.06
SF3B6-201ENST00000233468 AKT1S1Q96B36 256 aa15.44■□□□□ 0.06
SF3B6-201ENST00000233468 GGNBP2Q9H3C7 697 aa15.44■□□□□ 0.06
SF3B6-201ENST00000233468 AXIN2Q9Y2T1 843 aa15.44■□□□□ 0.06
SF3B6-201ENST00000233468 THRAP3Q9Y2W1 955 aaKnown RBP15.44■□□□□ 0.06
SF3B6-201ENST00000233468 LRRC37A3O60309 1634 aa15.43■□□□□ 0.06
SF3B6-201ENST00000233468 WNK3Q9BYP7 1800 aa15.43■□□□□ 0.06
SF3B6-201ENST00000233468 OVOS2A0A0J9YW53 1432 aa15.43■□□□□ 0.06
SF3B6-201ENST00000233468 CRB1P82279 1406 aa15.43■□□□□ 0.06
SF3B6-201ENST00000233468 OVOS2Q6IE36 1432 aa15.43■□□□□ 0.06
SF3B6-201ENST00000233468 WASHC2AQ641Q2 1341 aa15.43■□□□□ 0.06
SF3B6-201ENST00000233468 NSD2O96028 1365 aa15.42■□□□□ 0.06
SF3B6-201ENST00000233468 PARD3Q8TEW0 1356 aa15.41■□□□□ 0.06
SF3B6-201ENST00000233468 AMPHP49418 695 aa15.39■□□□□ 0.05
SF3B6-201ENST00000233468 TOM1L2Q6ZVM7 507 aa15.39■□□□□ 0.05
SF3B6-201ENST00000233468 CSB-PGBD3P0DP91 1061 aa15.38■□□□□ 0.05
SF3B6-201ENST00000233468 OVOS2A0A0G2JMS6 1433 aa15.37■□□□□ 0.05
SF3B6-201ENST00000233468 DDB1Q16531 1140 aa15.37■□□□□ 0.05
SF3B6-201ENST00000233468 NBPF14Q5TI25 921 aa15.37■□□□□ 0.05
SF3B6-201ENST00000233468 MARCH10Q8NA82 808 aaPredicted RBP15.37■□□□□ 0.05
SF3B6-201ENST00000233468 IP6K1Q92551 441 aa15.37■□□□□ 0.05
SF3B6-201ENST00000233468 MYOM1P52179 1685 aa15.36■□□□□ 0.05
SF3B6-201ENST00000233468 MORC1Q86VD1 984 aa15.36■□□□□ 0.05
SF3B6-201ENST00000233468 NFAT5O94916 1531 aa15.36■□□□□ 0.05
SF3B6-201ENST00000233468 ABCC6O95255 1503 aa15.36■□□□□ 0.05
SF3B6-201ENST00000233468 WDR17Q8IZU2 1322 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms