RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 BLMP54132 1417 aaPredicted RBP18.85■□□□□ 0.61
SEC61B-201ENST00000223641 SPATA31A6Q5VVP1 1343 aa18.85■□□□□ 0.61
SEC61B-201ENST00000223641 PPM1GO15355 546 aaPredicted RBP18.85■□□□□ 0.61
SEC61B-201ENST00000223641 HSP90AB2PQ58FF8 381 aa18.85■□□□□ 0.61
SEC61B-201ENST00000223641 DIAPH1O60610 1272 aaKnown RBP18.83■□□□□ 0.6
SEC61B-201ENST00000223641 IL13P35225 146 aa18.83■□□□□ 0.6
SEC61B-201ENST00000223641 HAP1P54257 671 aaPredicted RBP18.83■□□□□ 0.6
SEC61B-201ENST00000223641 AXIN2Q9Y2T1 843 aa18.83■□□□□ 0.6
SEC61B-201ENST00000223641 COL14A1Q05707 1796 aaKnown RBP18.83■□□□□ 0.6
SEC61B-201ENST00000223641 RGPD1P0DJD0 1748 aa18.83■□□□□ 0.6
SEC61B-201ENST00000223641 FAM83GA6ND36 823 aa18.81■□□□□ 0.6
SEC61B-201ENST00000223641 EIF4A2Q14240 407 aaKnown RBP18.81■□□□□ 0.6
SEC61B-201ENST00000223641 PRDM11Q9NQV5 511 aa18.81■□□□□ 0.6
SEC61B-201ENST00000223641 CAMTA1Q9Y6Y1 1673 aa18.81■□□□□ 0.6
SEC61B-201ENST00000223641 CHRNA2Q15822 529 aa18.79■□□□□ 0.6
SEC61B-201ENST00000223641 LRP6O75581 1613 aa18.78■□□□□ 0.6
SEC61B-201ENST00000223641 NUDCQ9Y266 331 aa18.78■□□□□ 0.6
SEC61B-201ENST00000223641 ERBB3P21860 1342 aa18.77■□□□□ 0.6
SEC61B-201ENST00000223641 FAM208AQ9UK61 1670 aaKnown RBP18.77■□□□□ 0.6
SEC61B-201ENST00000223641 ZBTB7CA1YPR0 619 aa18.77■□□□□ 0.6
SEC61B-201ENST00000223641 NWD2Q9ULI1 1742 aa18.77■□□□□ 0.59
SEC61B-201ENST00000223641 COL5A2P05997 1499 aaPredicted RBP18.77■□□□□ 0.59
SEC61B-201ENST00000223641 PLCH1Q4KWH8 1693 aa18.76■□□□□ 0.59
SEC61B-201ENST00000223641 NCAPD2Q15021 1401 aa18.76■□□□□ 0.59
SEC61B-201ENST00000223641 NUTM2BA6NNL0 878 aaPredicted RBP18.76■□□□□ 0.59
SEC61B-201ENST00000223641 NUTM2EB1AL46 878 aaPredicted RBP18.76■□□□□ 0.59
SEC61B-201ENST00000223641 NUTM2AQ8IVF1 878 aaPredicted RBP18.76■□□□□ 0.59
SEC61B-201ENST00000223641 ADAMTS8Q9UP79 889 aa18.76■□□□□ 0.59
SEC61B-201ENST00000223641 RGPD2P0DJD1 1756 aa18.76■□□□□ 0.59
SEC61B-201ENST00000223641 ADAMTS2O95450 1211 aa18.75■□□□□ 0.59
SEC61B-201ENST00000223641 WDR43Q15061 677 aaKnown RBP eCLIP18.75■□□□□ 0.59
SEC61B-201ENST00000223641 ANKRD24Q8TF21 1146 aa18.75■□□□□ 0.59
SEC61B-201ENST00000223641 IGSF1Q8N6C5 1336 aa18.74■□□□□ 0.59
SEC61B-201ENST00000223641 SLIT2O94813 1529 aa18.74■□□□□ 0.59
SEC61B-201ENST00000223641 NRAPQ86VF7 1730 aa18.74■□□□□ 0.59
SEC61B-201ENST00000223641 KDRP35968 1356 aa18.74■□□□□ 0.59
SEC61B-201ENST00000223641 FAM9BQ8IZU0 186 aa18.74■□□□□ 0.59
SEC61B-201ENST00000223641 EYA1Q99502 592 aa18.74■□□□□ 0.59
SEC61B-201ENST00000223641 U2SURPO15042 1029 aaKnown RBP18.72■□□□□ 0.59
SEC61B-201ENST00000223641 U2AF1L5P0DN76 240 aaPredicted RBP18.72■□□□□ 0.59
SEC61B-201ENST00000223641 U2AF1Q01081 240 aaKnown RBP eCLIP18.72■□□□□ 0.59
SEC61B-201ENST00000223641 BTG4Q9NY30 223 aa18.72■□□□□ 0.59
SEC61B-201ENST00000223641 WDR17Q8IZU2 1322 aa18.72■□□□□ 0.59
SEC61B-201ENST00000223641 FCHSD2O94868 740 aa18.71■□□□□ 0.59
SEC61B-201ENST00000223641 NBPF6Q5VWK0 638 aa18.71■□□□□ 0.59
SEC61B-201ENST00000223641 FNBP4Q8N3X1 1017 aaPredicted RBP18.71■□□□□ 0.59
SEC61B-201ENST00000223641 LTV1Q96GA3 475 aaPredicted RBP18.71■□□□□ 0.59
SEC61B-201ENST00000223641 NBPF4Q96M43 638 aa18.71■□□□□ 0.59
SEC61B-201ENST00000223641 RSPH6AQ9H0K4 717 aa18.7■□□□□ 0.58
SEC61B-201ENST00000223641 PLEKHF1Q96S99 279 aa18.69■□□□□ 0.58
SEC61B-201ENST00000223641 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.69■□□□□ 0.58
SEC61B-201ENST00000223641 SULT6B1Q6IMI4 303 aa18.68■□□□□ 0.58
SEC61B-201ENST00000223641 BCL9LQ86UU0 1499 aa18.68■□□□□ 0.58
SEC61B-201ENST00000223641 AEBP1Q8IUX7 1158 aa18.67■□□□□ 0.58
SEC61B-201ENST00000223641 CRB1P82279 1406 aa18.66■□□□□ 0.58
SEC61B-201ENST00000223641 HMOX1P09601 288 aa18.66■□□□□ 0.58
SEC61B-201ENST00000223641 EVA1CP58658 441 aa18.66■□□□□ 0.58
SEC61B-201ENST00000223641 LARP1Q6PKG0 1096 aaKnown RBP18.66■□□□□ 0.58
SEC61B-201ENST00000223641 NGLY1Q96IV0 654 aa18.66■□□□□ 0.58
SEC61B-201ENST00000223641 C8orf37Q96NL8 207 aa18.66■□□□□ 0.58
SEC61B-201ENST00000223641 CARD10Q9BWT7 1032 aa18.66■□□□□ 0.58
SEC61B-201ENST00000223641 PNNQ9H307 717 aaKnown RBP18.66■□□□□ 0.58
SEC61B-201ENST00000223641 RUNDC1Q96C34 613 aa18.65■□□□□ 0.58
SEC61B-201ENST00000223641 CSB-PGBD3P0DP91 1061 aa18.64■□□□□ 0.57
SEC61B-201ENST00000223641 UNC5CLQ8IV45 518 aa18.64■□□□□ 0.57
SEC61B-201ENST00000223641 STRN4Q9NRL3 753 aa18.64■□□□□ 0.57
SEC61B-201ENST00000223641 NLRP2Q9NX02 1062 aa18.64■□□□□ 0.57
SEC61B-201ENST00000223641 PLEKHG2Q9H7P9 1386 aa18.64■□□□□ 0.57
SEC61B-201ENST00000223641 PRKAR2BP31323 418 aa18.63■□□□□ 0.57
SEC61B-201ENST00000223641 TOM1L2Q6ZVM7 507 aa18.63■□□□□ 0.57
SEC61B-201ENST00000223641 USHBP1Q8N6Y0 703 aa18.63■□□□□ 0.57
SEC61B-201ENST00000223641 MEX3CQ5U5Q3 659 aaKnown RBP18.62■□□□□ 0.57
SEC61B-201ENST00000223641 CCDC146Q8IYE0 955 aa18.62■□□□□ 0.57
SEC61B-201ENST00000223641 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
SEC61B-201ENST00000223641 PHACTR3Q96KR7 559 aa18.61■□□□□ 0.57
SEC61B-201ENST00000223641 VPS72Q15906 364 aa18.6■□□□□ 0.57
SEC61B-201ENST00000223641 USP21Q9UK80 565 aa18.6■□□□□ 0.57
SEC61B-201ENST00000223641 AFF2P51816 1311 aa18.59■□□□□ 0.57
SEC61B-201ENST00000223641 SPATA31A1Q5TZJ5 1347 aa18.59■□□□□ 0.57
SEC61B-201ENST00000223641 SPATA31A5Q5VU36 1347 aa18.59■□□□□ 0.57
SEC61B-201ENST00000223641 SPATA31A7Q8IWB4 1347 aa18.59■□□□□ 0.57
SEC61B-201ENST00000223641 WNK3Q9BYP7 1800 aa18.59■□□□□ 0.57
SEC61B-201ENST00000223641 TCP11L2Q8N4U5 519 aa18.59■□□□□ 0.57
SEC61B-201ENST00000223641 PARP4Q9UKK3 1724 aaKnown RBP18.58■□□□□ 0.57
SEC61B-201ENST00000223641 APAF1O14727 1248 aa18.58■□□□□ 0.56
SEC61B-201ENST00000223641 THRAP3Q9Y2W1 955 aaKnown RBP18.58■□□□□ 0.56
SEC61B-201ENST00000223641 MEGF6O75095 1541 aa18.58■□□□□ 0.56
SEC61B-201ENST00000223641 DISP2A7MBM2 1401 aa18.57■□□□□ 0.56
SEC61B-201ENST00000223641 PKD1L3Q7Z443 1732 aa18.57■□□□□ 0.56
SEC61B-201ENST00000223641 MAPK8IP3Q9UPT6 1336 aa18.57■□□□□ 0.56
SEC61B-201ENST00000223641 NGEFQ8N5V2 710 aa18.57■□□□□ 0.56
SEC61B-201ENST00000223641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.57■□□□□ 0.56
SEC61B-201ENST00000223641 DLG5Q8TDM6 1919 aa18.57■□□□□ 0.56
SEC61B-201ENST00000223641 NEFMP07197 916 aa18.56■□□□□ 0.56
SEC61B-201ENST00000223641 TMPOP42166 694 aaKnown RBP18.56■□□□□ 0.56
SEC61B-201ENST00000223641 RAPGEF4Q8WZA2 1011 aa18.56■□□□□ 0.56
SEC61B-201ENST00000223641 OVOS2A0A0G2JMS6 1433 aa18.56■□□□□ 0.56
SEC61B-201ENST00000223641 ATRNO75882 1429 aa18.56■□□□□ 0.56
SEC61B-201ENST00000223641 TATP17735 454 aaPredicted RBP18.55■□□□□ 0.56
SEC61B-201ENST00000223641 HNRNPUQ00839 825 aaKnown RBP eCLIP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms