RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 CD163L1Q9NR16 1453 aa22.58■■□□□ 1.2
LIM2-201ENST00000221973 MYOM1P52179 1685 aa22.58■■□□□ 1.2
LIM2-201ENST00000221973 NLRP6P59044 892 aa22.57■■□□□ 1.2
LIM2-201ENST00000221973 TCP11L2Q8N4U5 519 aa22.57■■□□□ 1.2
LIM2-201ENST00000221973 ZNF692Q9BU19 519 aaPredicted RBP22.57■■□□□ 1.2
LIM2-201ENST00000221973 CPSF1Q10570 1443 aaKnown RBP22.57■■□□□ 1.2
LIM2-201ENST00000221973 KTN1Q86UP2 1357 aaKnown RBP22.56■■□□□ 1.2
LIM2-201ENST00000221973 PSDA5PKW4 1024 aaPredicted RBP22.56■■□□□ 1.2
LIM2-201ENST00000221973 FAM196AQ6ZSG2 479 aa22.56■■□□□ 1.2
LIM2-201ENST00000221973 COL18A1P39060 1754 aa22.55■■□□□ 1.2
LIM2-201ENST00000221973 AATKQ6ZMQ8 1374 aa22.55■■□□□ 1.2
LIM2-201ENST00000221973 TRIM37O94972 964 aa22.55■■□□□ 1.2
LIM2-201ENST00000221973 LRP5O75197 1615 aa22.55■■□□□ 1.2
LIM2-201ENST00000221973 AKAP12Q02952 1782 aa22.55■■□□□ 1.2
LIM2-201ENST00000221973 CAMKK2Q96RR4 588 aa22.54■■□□□ 1.2
LIM2-201ENST00000221973 CARD14Q9BXL6 1004 aa22.54■■□□□ 1.2
LIM2-201ENST00000221973 THRAP3Q9Y2W1 955 aaKnown RBP22.54■■□□□ 1.2
LIM2-201ENST00000221973 EZH2Q15910 746 aaKnown RBP22.53■■□□□ 1.2
LIM2-201ENST00000221973 TTC21BQ7Z4L5 1316 aa22.53■■□□□ 1.2
LIM2-201ENST00000221973 PARP4Q9UKK3 1724 aaKnown RBP22.52■■□□□ 1.2
LIM2-201ENST00000221973 CRB1P82279 1406 aa22.52■■□□□ 1.2
LIM2-201ENST00000221973 AXIN2Q9Y2T1 843 aa22.52■■□□□ 1.2
LIM2-201ENST00000221973 PDE3BQ13370 1112 aa22.51■■□□□ 1.19
LIM2-201ENST00000221973 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.5■■□□□ 1.19
LIM2-201ENST00000221973 NSD3Q9BZ95 1437 aa22.49■■□□□ 1.19
LIM2-201ENST00000221973 EDC4Q6P2E9 1401 aaKnown RBP22.48■■□□□ 1.19
LIM2-201ENST00000221973 ZBTB7CA1YPR0 619 aa22.48■■□□□ 1.19
LIM2-201ENST00000221973 APBA3O96018 575 aa22.48■■□□□ 1.19
LIM2-201ENST00000221973 R3HDM1Q15032 1099 aaKnown RBP22.48■■□□□ 1.19
LIM2-201ENST00000221973 ARHGEF25Q86VW2 580 aa22.48■■□□□ 1.19
LIM2-201ENST00000221973 KNSTRNQ9Y448 316 aa22.47■■□□□ 1.19
LIM2-201ENST00000221973 PEAK1Q9H792 1746 aa22.47■■□□□ 1.19
LIM2-201ENST00000221973 NFAT5O94916 1531 aa22.47■■□□□ 1.19
LIM2-201ENST00000221973 RREB1Q92766 1687 aa22.46■■□□□ 1.19
LIM2-201ENST00000221973 TTC21AQ8NDW8 1320 aa22.46■■□□□ 1.19
LIM2-201ENST00000221973 PER1O15534 1290 aaPredicted RBP22.45■■□□□ 1.18
LIM2-201ENST00000221973 PARD3Q8TEW0 1356 aa22.45■■□□□ 1.18
LIM2-201ENST00000221973 LRRC37A3O60309 1634 aa22.45■■□□□ 1.18
LIM2-201ENST00000221973 MON2Q7Z3U7 1717 aa22.45■■□□□ 1.18
LIM2-201ENST00000221973 RGPD5Q99666 1765 aa22.45■■□□□ 1.18
LIM2-201ENST00000221973 NME9Q86XW9 330 aa22.44■■□□□ 1.18
LIM2-201ENST00000221973 WDR17Q8IZU2 1322 aa22.44■■□□□ 1.18
LIM2-201ENST00000221973 CGNL1Q0VF96 1302 aa22.42■■□□□ 1.18
LIM2-201ENST00000221973 TOM1L2Q6ZVM7 507 aa22.42■■□□□ 1.18
LIM2-201ENST00000221973 KCNH5Q8NCM2 988 aa22.42■■□□□ 1.18
LIM2-201ENST00000221973 WNK3Q9BYP7 1800 aa22.42■■□□□ 1.18
LIM2-201ENST00000221973 NUP188Q5SRE5 1749 aa22.42■■□□□ 1.18
LIM2-201ENST00000221973 CNGB1Q14028 1251 aaPredicted RBP22.41■■□□□ 1.18
LIM2-201ENST00000221973 USP54Q70EL1 1684 aa22.4■■□□□ 1.18
LIM2-201ENST00000221973 FYB1O15117 783 aa22.4■■□□□ 1.18
LIM2-201ENST00000221973 SOX12O15370 315 aa22.4■■□□□ 1.18
LIM2-201ENST00000221973 GGNBP2Q9H3C7 697 aa22.4■■□□□ 1.18
LIM2-201ENST00000221973 SBF2Q86WG5 1849 aa22.4■■□□□ 1.18
LIM2-201ENST00000221973 OVOS2A0A0G2JMS6 1433 aa22.4■■□□□ 1.18
LIM2-201ENST00000221973 OVOS2A0A0J9YW53 1432 aa22.4■■□□□ 1.18
LIM2-201ENST00000221973 OVOS2Q6IE36 1432 aa22.4■■□□□ 1.18
LIM2-201ENST00000221973 USP31Q70CQ4 1352 aa22.39■■□□□ 1.18
LIM2-201ENST00000221973 AMER1Q5JTC6 1135 aaPredicted RBP22.39■■□□□ 1.17
LIM2-201ENST00000221973 DDB1Q16531 1140 aa22.38■■□□□ 1.17
LIM2-201ENST00000221973 CC2D1BQ5T0F9 858 aaKnown RBP22.37■■□□□ 1.17
LIM2-201ENST00000221973 PTF1AQ7RTS3 328 aa22.37■■□□□ 1.17
LIM2-201ENST00000221973 MARCH10Q8NA82 808 aaPredicted RBP22.37■■□□□ 1.17
LIM2-201ENST00000221973 CARD10Q9BWT7 1032 aa22.37■■□□□ 1.17
LIM2-201ENST00000221973 ABCC6O95255 1503 aa22.36■■□□□ 1.17
LIM2-201ENST00000221973 COG3Q96JB2 828 aa22.35■■□□□ 1.17
LIM2-201ENST00000221973 BCL9O00512 1426 aa22.34■■□□□ 1.17
LIM2-201ENST00000221973 RGPD3A6NKT7 1758 aaPredicted RBP22.33■■□□□ 1.16
LIM2-201ENST00000221973 RGPD4Q7Z3J3 1758 aa22.33■■□□□ 1.16
LIM2-201ENST00000221973 CDCA7Q9BWT1 371 aaPredicted RBP22.32■■□□□ 1.16
LIM2-201ENST00000221973 NSD2O96028 1365 aa22.32■■□□□ 1.16
LIM2-201ENST00000221973 NPC1L1Q9UHC9 1359 aa22.31■■□□□ 1.16
LIM2-201ENST00000221973 PLSCR1O15162 318 aa22.31■■□□□ 1.16
LIM2-201ENST00000221973 CSB-PGBD3P0DP91 1061 aa22.31■■□□□ 1.16
LIM2-201ENST00000221973 MORC1Q86VD1 984 aa22.3■■□□□ 1.16
LIM2-201ENST00000221973 BCL11BQ9C0K0 894 aaPredicted RBP22.3■■□□□ 1.16
LIM2-201ENST00000221973 ERBB3P21860 1342 aa22.3■■□□□ 1.16
LIM2-201ENST00000221973 LTN1O94822 1766 aa22.29■■□□□ 1.16
LIM2-201ENST00000221973 TNNT2P45379 298 aaPredicted RBP22.28■■□□□ 1.16
LIM2-201ENST00000221973 NBPF14Q5TI25 921 aa22.28■■□□□ 1.16
LIM2-201ENST00000221973 PROM2Q8N271 834 aa22.28■■□□□ 1.16
LIM2-201ENST00000221973 KIF20BQ96Q89 1820 aa22.28■■□□□ 1.16
LIM2-201ENST00000221973 DIEXFQ68CQ4 756 aaKnown RBP22.26■■□□□ 1.15
LIM2-201ENST00000221973 ANO8Q9HCE9 1232 aaPredicted RBP22.26■■□□□ 1.15
LIM2-201ENST00000221973 TNS2Q63HR2 1409 aa22.25■■□□□ 1.15
LIM2-201ENST00000221973 EXOC5O00471 708 aa22.25■■□□□ 1.15
LIM2-201ENST00000221973 FBLN1P23142 703 aa22.25■■□□□ 1.15
LIM2-201ENST00000221973 ANP32CO43423 234 aa22.22■■□□□ 1.15
LIM2-201ENST00000221973 ANKRD24Q8TF21 1146 aa22.22■■□□□ 1.15
LIM2-201ENST00000221973 NLRP2Q9NX02 1062 aa22.22■■□□□ 1.15
LIM2-201ENST00000221973 KCNQ2O43526 872 aa22.21■■□□□ 1.15
LIM2-201ENST00000221973 RALBP1Q15311 655 aa22.2■■□□□ 1.14
LIM2-201ENST00000221973 PRKRIP1Q9H875 184 aaPredicted RBP22.2■■□□□ 1.14
LIM2-201ENST00000221973 CASZ1Q86V15 1759 aa22.2■■□□□ 1.14
LIM2-201ENST00000221973 RRS1Q15050 365 aaKnown RBP22.19■■□□□ 1.14
LIM2-201ENST00000221973 PDGFDQ9GZP0 370 aaPredicted RBP22.19■■□□□ 1.14
LIM2-201ENST00000221973 ANKRD26Q9UPS8 1709 aa22.18■■□□□ 1.14
LIM2-201ENST00000221973 NHSQ6T4R5 1651 aa22.18■■□□□ 1.14
LIM2-201ENST00000221973 IP6K1Q92551 441 aa22.18■■□□□ 1.14
LIM2-201ENST00000221973 IL2RBP14784 551 aa22.17■■□□□ 1.14
LIM2-201ENST00000221973 TXNRD1Q16881 649 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms