RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 ATP2B2Q01814 1243 aa21.21■□□□□ 0.99
EXTL3-201ENST00000220562 WDR63Q8IWG1 891 aa21.21■□□□□ 0.99
EXTL3-201ENST00000220562 SRCIN1Q9C0H9 1055 aa21.21■□□□□ 0.99
EXTL3-201ENST00000220562 MVPQ14764 893 aaKnown RBP21.21■□□□□ 0.99
EXTL3-201ENST00000220562 TNMDQ9H2S6 317 aa21.21■□□□□ 0.99
EXTL3-201ENST00000220562 BRPF3Q9ULD4 1205 aa21.21■□□□□ 0.99
EXTL3-201ENST00000220562 CHD1LQ86WJ1 897 aa21.2■□□□□ 0.98
EXTL3-201ENST00000220562 PNISRQ8TF01 805 aaKnown RBP21.2■□□□□ 0.98
EXTL3-201ENST00000220562 SYCP1Q15431 976 aa21.2■□□□□ 0.98
EXTL3-201ENST00000220562 CCDC192P0DO97 292 aa21.19■□□□□ 0.98
EXTL3-201ENST00000220562 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
EXTL3-201ENST00000220562 PIP4K2AP48426 406 aaPredicted RBP21.19■□□□□ 0.98
EXTL3-201ENST00000220562 ATF7IPQ6VMQ6 1270 aa21.19■□□□□ 0.98
EXTL3-201ENST00000220562 DDX54Q8TDD1 881 aaKnown RBP21.19■□□□□ 0.98
EXTL3-201ENST00000220562 ZNF530Q6P9A1 599 aaPredicted RBP21.19■□□□□ 0.98
EXTL3-201ENST00000220562 ME1P48163 572 aa21.19■□□□□ 0.98
EXTL3-201ENST00000220562 NBPF8Q3BBV2 869 aa21.19■□□□□ 0.98
EXTL3-201ENST00000220562 AACSQ86V21 672 aa21.19■□□□□ 0.98
EXTL3-201ENST00000220562 JMYQ8N9B5 988 aa21.19■□□□□ 0.98
EXTL3-201ENST00000220562 GRIN2BQ13224 1484 aa21.19■□□□□ 0.98
EXTL3-201ENST00000220562 RDXP35241 583 aaKnown RBP21.19■□□□□ 0.98
EXTL3-201ENST00000220562 WDR33Q9C0J8 1336 aaKnown RBP21.18■□□□□ 0.98
EXTL3-201ENST00000220562 NUP133Q8WUM0 1156 aa21.18■□□□□ 0.98
EXTL3-201ENST00000220562 DCTN1Q14203 1278 aa21.18■□□□□ 0.98
EXTL3-201ENST00000220562 ZNF692Q9BU19 519 aaPredicted RBP21.18■□□□□ 0.98
EXTL3-201ENST00000220562 NACAP1Q9BZK3 213 aa21.18■□□□□ 0.98
EXTL3-201ENST00000220562 PRG4Q92954 1404 aaPredicted RBP21.18■□□□□ 0.98
EXTL3-201ENST00000220562 ARAP1Q96P48 1450 aa21.18■□□□□ 0.98
EXTL3-201ENST00000220562 MTERF4Q7Z6M4 381 aaKnown RBP21.18■□□□□ 0.98
EXTL3-201ENST00000220562 TRIM22Q8IYM9 498 aa21.17■□□□□ 0.98
EXTL3-201ENST00000220562 SPG7Q9UQ90 795 aa21.17■□□□□ 0.98
EXTL3-201ENST00000220562 PHF23Q9BUL5 403 aaPredicted RBP21.17■□□□□ 0.98
EXTL3-201ENST00000220562 CWC15Q9P013 229 aaKnown RBP21.17■□□□□ 0.98
EXTL3-201ENST00000220562 RTEL1-TNFRSF6BF6WH68 1400 aa21.17■□□□□ 0.98
EXTL3-201ENST00000220562 TOM1L2Q6ZVM7 507 aa21.17■□□□□ 0.98
EXTL3-201ENST00000220562 MAP7D2Q96T17 732 aa21.17■□□□□ 0.98
EXTL3-201ENST00000220562 AEBP2Q6ZN18 517 aaPredicted RBP21.17■□□□□ 0.98
EXTL3-201ENST00000220562 CT47B1P0C2W7 299 aaPredicted RBP21.16■□□□□ 0.98
EXTL3-201ENST00000220562 FKBP4Q02790 459 aaKnown RBP eCLIP21.16■□□□□ 0.98
EXTL3-201ENST00000220562 PDRG1Q9NUG6 133 aa21.16■□□□□ 0.98
EXTL3-201ENST00000220562 ZNHIT6Q9NWK9 470 aaKnown RBP21.16■□□□□ 0.98
EXTL3-201ENST00000220562 DACH1Q9UI36 760 aa21.16■□□□□ 0.98
EXTL3-201ENST00000220562 LARP1BQ659C4 914 aaKnown RBP21.16■□□□□ 0.98
EXTL3-201ENST00000220562 H0YHG0 523 aa21.15■□□□□ 0.98
EXTL3-201ENST00000220562 RRS1Q15050 365 aaKnown RBP21.15■□□□□ 0.98
EXTL3-201ENST00000220562 RBM10P98175 930 aaKnown RBP21.15■□□□□ 0.98
EXTL3-201ENST00000220562 BACH2Q9BYV9 841 aa21.15■□□□□ 0.98
EXTL3-201ENST00000220562 CCDC57Q2TAC2 916 aa21.15■□□□□ 0.98
EXTL3-201ENST00000220562 PPFIBP1Q86W92 1011 aa21.15■□□□□ 0.98
EXTL3-201ENST00000220562 WWC2Q6AWC2 1192 aa21.15■□□□□ 0.98
EXTL3-201ENST00000220562 BTBD11A6QL63 1104 aa21.15■□□□□ 0.98
EXTL3-201ENST00000220562 CWC27Q6UX04 472 aaKnown RBP21.14■□□□□ 0.98
EXTL3-201ENST00000220562 ZHX3Q9H4I2 956 aa21.14■□□□□ 0.98
EXTL3-201ENST00000220562 KRT85P78386 507 aa21.14■□□□□ 0.97
EXTL3-201ENST00000220562 ZSCAN25Q6NSZ9 544 aa21.14■□□□□ 0.97
EXTL3-201ENST00000220562 MPNDQ8N594 471 aa21.14■□□□□ 0.97
EXTL3-201ENST00000220562 TANGO6Q9C0B7 1094 aa21.13■□□□□ 0.97
EXTL3-201ENST00000220562 SRGAP3O43295 1099 aa21.13■□□□□ 0.97
EXTL3-201ENST00000220562 JAKMIP1Q96N16 626 aaKnown RBP21.13■□□□□ 0.97
EXTL3-201ENST00000220562 AXDND1Q5T1B0 1012 aaPredicted RBP21.12■□□□□ 0.97
EXTL3-201ENST00000220562 HECW1Q76N89 1606 aa21.12■□□□□ 0.97
EXTL3-201ENST00000220562 STIM1Q13586 685 aa21.12■□□□□ 0.97
EXTL3-201ENST00000220562 MPHOSPH8Q99549 860 aa21.12■□□□□ 0.97
EXTL3-201ENST00000220562 DEF6Q9H4E7 631 aa21.12■□□□□ 0.97
EXTL3-201ENST00000220562 SPATA32Q96LK8 384 aa21.11■□□□□ 0.97
EXTL3-201ENST00000220562 GRPEL1Q9HAV7 217 aa21.11■□□□□ 0.97
EXTL3-201ENST00000220562 SOGA3Q5TF21 947 aa21.11■□□□□ 0.97
EXTL3-201ENST00000220562 BLOC1S2Q6QNY1 142 aa21.11■□□□□ 0.97
EXTL3-201ENST00000220562 SPINK5Q9NQ38 1064 aaPredicted RBP21.11■□□□□ 0.97
EXTL3-201ENST00000220562 PLEKHH2Q8IVE3 1493 aa21.11■□□□□ 0.97
EXTL3-201ENST00000220562 IL1RAPL2Q9NP60 686 aa21.1■□□□□ 0.97
EXTL3-201ENST00000220562 EFCAB5A4FU69 1503 aa21.1■□□□□ 0.97
EXTL3-201ENST00000220562 NOL7Q9UMY1 257 aaKnown RBP21.1■□□□□ 0.97
EXTL3-201ENST00000220562 NUTM2BA6NNL0 878 aaPredicted RBP21.09■□□□□ 0.97
EXTL3-201ENST00000220562 NUTM2EB1AL46 878 aaPredicted RBP21.09■□□□□ 0.97
EXTL3-201ENST00000220562 HMGN5P82970 282 aaKnown RBP21.09■□□□□ 0.97
EXTL3-201ENST00000220562 NUTM2AQ8IVF1 878 aaPredicted RBP21.09■□□□□ 0.97
EXTL3-201ENST00000220562 CCDC191Q8NCU4 936 aa21.09■□□□□ 0.97
EXTL3-201ENST00000220562 RBM5P52756 815 aaKnown RBP eCLIP21.09■□□□□ 0.97
EXTL3-201ENST00000220562 CBFA2T2O43439 604 aa21.09■□□□□ 0.97
EXTL3-201ENST00000220562 CCDC181Q5TID7 509 aa21.09■□□□□ 0.97
EXTL3-201ENST00000220562 LEKR1Q6ZMV7 388 aa21.09■□□□□ 0.97
EXTL3-201ENST00000220562 FAM177A1Q8N128 213 aaPredicted RBP21.09■□□□□ 0.97
EXTL3-201ENST00000220562 TDO2P48775 406 aa21.08■□□□□ 0.97
EXTL3-201ENST00000220562 THEMISQ8N1K5 641 aaPredicted RBP21.08■□□□□ 0.97
EXTL3-201ENST00000220562 ERLIN2O94905 339 aa21.08■□□□□ 0.96
EXTL3-201ENST00000220562 CDKL5O76039 1030 aa21.08■□□□□ 0.96
EXTL3-201ENST00000220562 NUTM1Q86Y26 1132 aa21.08■□□□□ 0.96
EXTL3-201ENST00000220562 ZSCAN31Q96LW9 406 aaPredicted RBP21.07■□□□□ 0.96
EXTL3-201ENST00000220562 SYNJ1O43426 1573 aa21.07■□□□□ 0.96
EXTL3-201ENST00000220562 SUPT6HQ7KZ85 1726 aaKnown RBP21.07■□□□□ 0.96
EXTL3-201ENST00000220562 PDCL3Q9H2J4 239 aa21.07■□□□□ 0.96
EXTL3-201ENST00000220562 PPP1R1BQ9UD71 204 aaPredicted RBP21.07■□□□□ 0.96
EXTL3-201ENST00000220562 DHX8Q14562 1220 aaKnown RBP21.07■□□□□ 0.96
EXTL3-201ENST00000220562 DAPK1P53355 1430 aa21.06■□□□□ 0.96
EXTL3-201ENST00000220562 NSD3Q9BZ95 1437 aa21.06■□□□□ 0.96
EXTL3-201ENST00000220562 CCDC184Q52MB2 194 aa21.06■□□□□ 0.96
EXTL3-201ENST00000220562 TMEM57Q8N5G2 664 aa21.05■□□□□ 0.96
EXTL3-201ENST00000220562 ANKRD30BQ9BXX2 1392 aa21.05■□□□□ 0.96
EXTL3-201ENST00000220562 UBAC1Q9BSL1 405 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms