RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 SCAPERQ9BY12 1400 aa13.17□□□□□ -0.3
KNOP1-201ENST00000219837 SERPINC1P01008 464 aa13.16□□□□□ -0.3
KNOP1-201ENST00000219837 NEFHP12036 1026 aa13.16□□□□□ -0.3
KNOP1-201ENST00000219837 NEK4P51957 841 aa13.16□□□□□ -0.3
KNOP1-201ENST00000219837 TCP11L2Q8N4U5 519 aa13.16□□□□□ -0.3
KNOP1-201ENST00000219837 DEF6Q9H4E7 631 aa13.16□□□□□ -0.3
KNOP1-201ENST00000219837 RTEL1-TNFRSF6BF6WH68 1400 aa13.16□□□□□ -0.3
KNOP1-201ENST00000219837 CCP110O43303 1012 aa13.16□□□□□ -0.3
KNOP1-201ENST00000219837 RAI14Q9P0K7 980 aa13.16□□□□□ -0.3
KNOP1-201ENST00000219837 PRG4Q92954 1404 aaPredicted RBP13.16□□□□□ -0.3
KNOP1-201ENST00000219837 AAMPQ13685 434 aa13.16□□□□□ -0.3
KNOP1-201ENST00000219837 TRIM22Q8IYM9 498 aa13.16□□□□□ -0.3
KNOP1-201ENST00000219837 SPC24Q8NBT2 197 aa13.16□□□□□ -0.3
KNOP1-201ENST00000219837 PRPF40AO75400 957 aaKnown RBP13.16□□□□□ -0.3
KNOP1-201ENST00000219837 CCT4P50991 539 aaKnown RBP13.16□□□□□ -0.3
KNOP1-201ENST00000219837 THEMISQ8N1K5 641 aaPredicted RBP13.16□□□□□ -0.3
KNOP1-201ENST00000219837 AACSQ86V21 672 aa13.16□□□□□ -0.3
KNOP1-201ENST00000219837 CYP46A1Q9Y6A2 500 aa13.16□□□□□ -0.3
KNOP1-201ENST00000219837 ERLIN2O94905 339 aa13.15□□□□□ -0.3
KNOP1-201ENST00000219837 CALRP27797 417 aaKnown RBP13.15□□□□□ -0.3
KNOP1-201ENST00000219837 TDO2P48775 406 aa13.15□□□□□ -0.3
KNOP1-201ENST00000219837 PIP4K2AP48426 406 aaPredicted RBP13.15□□□□□ -0.3
KNOP1-201ENST00000219837 STIM1Q13586 685 aa13.15□□□□□ -0.3
KNOP1-201ENST00000219837 SEPT7Q16181 437 aaKnown RBP13.15□□□□□ -0.3
KNOP1-201ENST00000219837 ZNHIT6Q9NWK9 470 aaKnown RBP13.15□□□□□ -0.3
KNOP1-201ENST00000219837 DACH1Q9UI36 760 aa13.15□□□□□ -0.3
KNOP1-201ENST00000219837 PDZRN3Q9UPQ7 1066 aa13.15□□□□□ -0.3
KNOP1-201ENST00000219837 BRD4O60885 1362 aaPredicted RBP13.15□□□□□ -0.3
KNOP1-201ENST00000219837 NEBLO76041 1014 aa13.15□□□□□ -0.3
KNOP1-201ENST00000219837 STAC3Q96MF2 364 aa13.15□□□□□ -0.3
KNOP1-201ENST00000219837 FAM43AQ8N2R8 423 aa13.15□□□□□ -0.3
KNOP1-201ENST00000219837 USP5P45974 858 aa13.15□□□□□ -0.3
KNOP1-201ENST00000219837 CABP1Q9NZU7 370 aa13.15□□□□□ -0.3
KNOP1-201ENST00000219837 HECW1Q76N89 1606 aa13.15□□□□□ -0.3
KNOP1-201ENST00000219837 GCC1Q96CN9 775 aa13.14□□□□□ -0.31
KNOP1-201ENST00000219837 NOL7Q9UMY1 257 aaKnown RBP13.14□□□□□ -0.31
KNOP1-201ENST00000219837 AFAP1Q8N556 730 aa13.14□□□□□ -0.31
KNOP1-201ENST00000219837 ERBINQ96RT1 1412 aa13.14□□□□□ -0.31
KNOP1-201ENST00000219837 FIBPO43427 364 aa13.14□□□□□ -0.31
KNOP1-201ENST00000219837 ANKRD1Q15327 319 aa13.13□□□□□ -0.31
KNOP1-201ENST00000219837 IGHMBP2P38935 993 aaKnown RBP13.13□□□□□ -0.31
KNOP1-201ENST00000219837 CCDC181Q5TID7 509 aa13.13□□□□□ -0.31
KNOP1-201ENST00000219837 PPFIBP1Q86W92 1011 aa13.13□□□□□ -0.31
KNOP1-201ENST00000219837 CHMP4BP1P59074 171 aa13.13□□□□□ -0.31
KNOP1-201ENST00000219837 AEBP1Q8IUX7 1158 aa13.13□□□□□ -0.31
KNOP1-201ENST00000219837 RRS1Q15050 365 aaKnown RBP13.13□□□□□ -0.31
KNOP1-201ENST00000219837 SSBP05455 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
KNOP1-201ENST00000219837 ZRSR2Q15696 482 aaKnown RBP13.13□□□□□ -0.31
KNOP1-201ENST00000219837 CCDC85AQ96PX6 553 aaPredicted RBP13.12□□□□□ -0.31
KNOP1-201ENST00000219837 ENOX2Q16206 610 aaKnown RBP13.12□□□□□ -0.31
KNOP1-201ENST00000219837 ANKLE2Q86XL3 938 aa13.12□□□□□ -0.31
KNOP1-201ENST00000219837 ANKRD18AQ8IVF6 992 aa13.12□□□□□ -0.31
KNOP1-201ENST00000219837 VSIG10Q8N0Z9 540 aa13.12□□□□□ -0.31
KNOP1-201ENST00000219837 GRIN2BQ13224 1484 aa13.12□□□□□ -0.31
KNOP1-201ENST00000219837 BCAR3O75815 825 aa13.12□□□□□ -0.31
KNOP1-201ENST00000219837 ZNF692Q9BU19 519 aaPredicted RBP13.12□□□□□ -0.31
KNOP1-201ENST00000219837 LRP2BPQ9P2M1 347 aa13.12□□□□□ -0.31
KNOP1-201ENST00000219837 EHBP1L1Q8N3D4 1523 aa13.12□□□□□ -0.31
KNOP1-201ENST00000219837 CCDC191Q8NCU4 936 aa13.12□□□□□ -0.31
KNOP1-201ENST00000219837 CASKIN1Q8WXD9 1431 aa13.11□□□□□ -0.31
KNOP1-201ENST00000219837 ME1P48163 572 aa13.11□□□□□ -0.31
KNOP1-201ENST00000219837 CDCA7LQ96GN5 454 aa13.11□□□□□ -0.31
KNOP1-201ENST00000219837 SRCIN1Q9C0H9 1055 aa13.11□□□□□ -0.31
KNOP1-201ENST00000219837 TNMDQ9H2S6 317 aa13.11□□□□□ -0.31
KNOP1-201ENST00000219837 MCM2P49736 904 aa13.11□□□□□ -0.31
KNOP1-201ENST00000219837 UBAC1Q9BSL1 405 aa13.11□□□□□ -0.31
KNOP1-201ENST00000219837 H0YHG0 523 aa13.11□□□□□ -0.31
KNOP1-201ENST00000219837 PDCP20941 246 aa13.11□□□□□ -0.31
KNOP1-201ENST00000219837 JMYQ8N9B5 988 aa13.11□□□□□ -0.31
KNOP1-201ENST00000219837 IGF1RP08069 1367 aa13.11□□□□□ -0.31
KNOP1-201ENST00000219837 RABEP1Q15276 862 aa13.11□□□□□ -0.31
KNOP1-201ENST00000219837 SUPT6HQ7KZ85 1726 aaKnown RBP13.1□□□□□ -0.31
KNOP1-201ENST00000219837 AXDND1Q5T1B0 1012 aaPredicted RBP13.1□□□□□ -0.31
KNOP1-201ENST00000219837 PDRG1Q9NUG6 133 aa13.1□□□□□ -0.31
KNOP1-201ENST00000219837 ERICH3Q5RHP9 1530 aa13.1□□□□□ -0.31
KNOP1-201ENST00000219837 C9orf84Q5VXU9 1444 aa13.1□□□□□ -0.31
KNOP1-201ENST00000219837 GOLGA6L10A6NI86 522 aa13.1□□□□□ -0.31
KNOP1-201ENST00000219837 DESP17661 470 aa13.1□□□□□ -0.31
KNOP1-201ENST00000219837 CWC27Q6UX04 472 aaKnown RBP13.1□□□□□ -0.31
KNOP1-201ENST00000219837 ZPR1O75312 459 aa13.09□□□□□ -0.31
KNOP1-201ENST00000219837 CEP57L1Q8IYX8 460 aa13.09□□□□□ -0.31
KNOP1-201ENST00000219837 TRAK2O60296 914 aa13.09□□□□□ -0.31
KNOP1-201ENST00000219837 CDKL5O76039 1030 aa13.09□□□□□ -0.31
KNOP1-201ENST00000219837 PRDM11Q9NQV5 511 aa13.09□□□□□ -0.31
KNOP1-201ENST00000219837 NFKBIBQ15653 356 aa13.09□□□□□ -0.31
KNOP1-201ENST00000219837 CWC15Q9P013 229 aaKnown RBP13.09□□□□□ -0.31
KNOP1-201ENST00000219837 POGZQ7Z3K3 1410 aa13.09□□□□□ -0.31
KNOP1-201ENST00000219837 SSR1P43307 286 aaKnown RBP13.09□□□□□ -0.31
KNOP1-201ENST00000219837 PAXIP1Q6ZW49 1069 aaPredicted RBP13.09□□□□□ -0.31
KNOP1-201ENST00000219837 TMOD2Q9NZR1 351 aa13.09□□□□□ -0.31
KNOP1-201ENST00000219837 SCLT1Q96NL6 688 aa13.08□□□□□ -0.32
KNOP1-201ENST00000219837 GBP2P32456 591 aaPredicted RBP13.08□□□□□ -0.32
KNOP1-201ENST00000219837 CCDC97Q96F63 343 aaPredicted RBP13.08□□□□□ -0.32
KNOP1-201ENST00000219837 LUC7LQ9NQ29 371 aaKnown RBP13.08□□□□□ -0.32
KNOP1-201ENST00000219837 FANCIQ9NVI1 1328 aa13.08□□□□□ -0.32
KNOP1-201ENST00000219837 TRIM21P19474 475 aaKnown RBP13.08□□□□□ -0.32
KNOP1-201ENST00000219837 TTLL12Q14166 644 aaPredicted RBP13.08□□□□□ -0.32
KNOP1-201ENST00000219837 TXLNBQ8N3L3 684 aa13.08□□□□□ -0.32
KNOP1-201ENST00000219837 PLCD4Q9BRC7 762 aa13.08□□□□□ -0.32
KNOP1-201ENST00000219837 ANKIB1Q9P2G1 1089 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms