RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 SH3BP5LQ7L8J4 393 aa7.34□□□□□ -1.23
CDKN3-201ENST00000216414 SVOPQ8N4V2 548 aa7.34□□□□□ -1.23
CDKN3-201ENST00000216414 POLR3EQ9NVU0 708 aa7.34□□□□□ -1.23
CDKN3-201ENST00000216414 DNMT3AQ9Y6K1 912 aaPredicted RBP7.34□□□□□ -1.23
CDKN3-201ENST00000216414 SOS2Q07890 1332 aaPredicted RBP7.33□□□□□ -1.24
CDKN3-201ENST00000216414 MARSP56192 900 aaKnown RBP7.33□□□□□ -1.24
CDKN3-201ENST00000216414 FOXK2Q01167 660 aa7.33□□□□□ -1.24
CDKN3-201ENST00000216414 TRMT44Q8IYL2 757 aaKnown RBP7.33□□□□□ -1.24
CDKN3-201ENST00000216414 CCDC116Q8IYX3 515 aa7.33□□□□□ -1.24
CDKN3-201ENST00000216414 GPR161Q8N6U8 529 aaKnown RBP7.33□□□□□ -1.24
CDKN3-201ENST00000216414 DNMT3LQ9UJW3 386 aa7.33□□□□□ -1.24
CDKN3-201ENST00000216414 EMILIN1Q9Y6C2 1016 aa7.33□□□□□ -1.24
CDKN3-201ENST00000216414 IRS1P35568 1242 aa7.32□□□□□ -1.24
CDKN3-201ENST00000216414 KRT76Q01546 638 aa7.32□□□□□ -1.24
CDKN3-201ENST00000216414 TSEN34Q9BSV6 310 aaKnown RBP7.32□□□□□ -1.24
CDKN3-201ENST00000216414 COL25A1Q9BXS0 654 aaPredicted RBP7.32□□□□□ -1.24
CDKN3-201ENST00000216414 RSPH6AQ9H0K4 717 aa7.32□□□□□ -1.24
CDKN3-201ENST00000216414 ERFEQ4G0M1 354 aa7.31□□□□□ -1.24
CDKN3-201ENST00000216414 KANK3Q6NY19 840 aa7.31□□□□□ -1.24
CDKN3-201ENST00000216414 CTDSPL2Q05D32 466 aa7.3□□□□□ -1.24
CDKN3-201ENST00000216414 ZNF385CQ66K41 422 aaPredicted RBP7.3□□□□□ -1.24
CDKN3-201ENST00000216414 GPKOWQ92917 476 aaPredicted RBP eCLIP7.3□□□□□ -1.24
CDKN3-201ENST00000216414 PGPEP1Q9NXJ5 209 aa7.3□□□□□ -1.24
CDKN3-201ENST00000216414 ATP1B4Q9UN42 357 aaPredicted RBP7.3□□□□□ -1.24
CDKN3-201ENST00000216414 TTLL8A6PVC2 850 aa7.29□□□□□ -1.24
CDKN3-201ENST00000216414 PTSQ03393 145 aa7.29□□□□□ -1.24
CDKN3-201ENST00000216414 CBLBQ13191 982 aa7.29□□□□□ -1.24
CDKN3-201ENST00000216414 NANOS1Q8WY41 292 aaKnown RBP7.29□□□□□ -1.24
CDKN3-201ENST00000216414 SCARF2Q96GP6 870 aaPredicted RBP7.29□□□□□ -1.24
CDKN3-201ENST00000216414 ARHGAP9Q9BRR9 750 aa7.29□□□□□ -1.24
CDKN3-201ENST00000216414 FIGNL2A6NMB9 653 aa7.28□□□□□ -1.24
CDKN3-201ENST00000216414 PPP1R26Q5T8A7 1209 aaPredicted RBP7.28□□□□□ -1.24
CDKN3-201ENST00000216414 SLC10A4Q96EP9 437 aa7.28□□□□□ -1.24
CDKN3-201ENST00000216414 ZBTB33Q86T24 672 aa7.27□□□□□ -1.25
CDKN3-201ENST00000216414 LRRN4Q8WUT4 740 aa7.27□□□□□ -1.25
CDKN3-201ENST00000216414 PDXDC2PQ6P474 469 aa7.26□□□□□ -1.25
CDKN3-201ENST00000216414 CCDC155Q8N6L0 562 aa7.26□□□□□ -1.25
CDKN3-201ENST00000216414 KCTD15Q96SI1 283 aaPredicted RBP7.26□□□□□ -1.25
CDKN3-201ENST00000216414 FKBPLQ9UIM3 349 aa7.26□□□□□ -1.25
CDKN3-201ENST00000216414 SLURP2P0DP57 97 aa7.25□□□□□ -1.25
CDKN3-201ENST00000216414 NR6A1Q15406 480 aa7.25□□□□□ -1.25
CDKN3-201ENST00000216414 SV2AQ7L0J3 742 aa7.25□□□□□ -1.25
CDKN3-201ENST00000216414 CDC14CA4D256 554 aa7.24□□□□□ -1.25
CDKN3-201ENST00000216414 SPINT1O43278 529 aa7.24□□□□□ -1.25
CDKN3-201ENST00000216414 DHX9Q08211 1270 aaKnown RBP7.24□□□□□ -1.25
CDKN3-201ENST00000216414 RNFT1Q5M7Z0 435 aa7.24□□□□□ -1.25
CDKN3-201ENST00000216414 Q6ZVU0 165 aa7.24□□□□□ -1.25
CDKN3-201ENST00000216414 VWA5B2Q8N398 1253 aa7.24□□□□□ -1.25
CDKN3-201ENST00000216414 WHAMMQ8TF30 809 aa7.24□□□□□ -1.25
CDKN3-201ENST00000216414 CDV3Q9UKY7 258 aaKnown RBP7.24□□□□□ -1.25
CDKN3-201ENST00000216414 ARHGEF15O94989 841 aa7.23□□□□□ -1.25
CDKN3-201ENST00000216414 MAP3K10Q02779 954 aa7.23□□□□□ -1.25
CDKN3-201ENST00000216414 AGBL1Q96MI9 1066 aa7.23□□□□□ -1.25
CDKN3-201ENST00000216414 AP1G2O75843 785 aa7.22□□□□□ -1.25
CDKN3-201ENST00000216414 RELBQ01201 579 aa7.22□□□□□ -1.25
CDKN3-201ENST00000216414 PTK2Q05397 1052 aa7.22□□□□□ -1.25
CDKN3-201ENST00000216414 SKIV2LQ15477 1246 aaKnown RBP7.22□□□□□ -1.25
CDKN3-201ENST00000216414 INTS6LQ5JSJ4 861 aaKnown RBP7.22□□□□□ -1.25
CDKN3-201ENST00000216414 POLMQ9NP87 494 aaPredicted RBP7.22□□□□□ -1.25
CDKN3-201ENST00000216414 ENAMQ9NRM1 1142 aa7.22□□□□□ -1.25
CDKN3-201ENST00000216414 ZC3H4Q9UPT8 1303 aaKnown RBP7.22□□□□□ -1.25
CDKN3-201ENST00000216414 SLC35F4A4IF30 521 aa7.21□□□□□ -1.26
CDKN3-201ENST00000216414 ITGA6P23229 1130 aa7.21□□□□□ -1.26
CDKN3-201ENST00000216414 CTSOP43234 321 aaPredicted RBP7.21□□□□□ -1.26
CDKN3-201ENST00000216414 RAB15P59190 212 aa7.21□□□□□ -1.26
CDKN3-201ENST00000216414 XP32Q5T750 250 aa7.21□□□□□ -1.26
CDKN3-201ENST00000216414 FBXO31Q5XUX0 539 aaPredicted RBP7.21□□□□□ -1.26
CDKN3-201ENST00000216414 PROCA1Q8NCQ7 364 aaPredicted RBP7.21□□□□□ -1.26
CDKN3-201ENST00000216414 INSM2Q96T92 566 aaPredicted RBP7.21□□□□□ -1.26
CDKN3-201ENST00000216414 MSTNO14793 375 aa7.2□□□□□ -1.26
CDKN3-201ENST00000216414 ADAM32Q8TC27 787 aa7.2□□□□□ -1.26
CDKN3-201ENST00000216414 ZNF395Q9H8N7 513 aaPredicted RBP7.2□□□□□ -1.26
CDKN3-201ENST00000216414 TMPRSS4Q9NRS4 437 aa7.2□□□□□ -1.26
CDKN3-201ENST00000216414 SH3D19Q5HYK7 790 aa7.19□□□□□ -1.26
CDKN3-201ENST00000216414 OCSTAMPQ9BR26 566 aa7.19□□□□□ -1.26
CDKN3-201ENST00000216414 GPBP1L1Q9HC44 474 aaPredicted RBP7.19□□□□□ -1.26
CDKN3-201ENST00000216414 ADAM23O75077 832 aa7.18□□□□□ -1.26
CDKN3-201ENST00000216414 ADAMTS2O95450 1211 aa7.18□□□□□ -1.26
CDKN3-201ENST00000216414 NBPF20Q3BBV1 942 aa7.18□□□□□ -1.26
CDKN3-201ENST00000216414 PNMA1Q8ND90 353 aa7.18□□□□□ -1.26
CDKN3-201ENST00000216414 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.18□□□□□ -1.26
CDKN3-201ENST00000216414 KDM4CQ9H3R0 1056 aa7.18□□□□□ -1.26
CDKN3-201ENST00000216414 PHF20L1A8MW92 1017 aa7.17□□□□□ -1.26
CDKN3-201ENST00000216414 PPP2R2DQ66LE6 453 aa7.17□□□□□ -1.26
CDKN3-201ENST00000216414 LYPD4Q6UWN0 246 aa7.17□□□□□ -1.26
CDKN3-201ENST00000216414 DZIP3Q86Y13 1208 aaKnown RBP7.17□□□□□ -1.26
CDKN3-201ENST00000216414 ZNF784Q8NCA9 323 aaPredicted RBP7.17□□□□□ -1.26
CDKN3-201ENST00000216414 EPS8L1Q8TE68 723 aa7.17□□□□□ -1.26
CDKN3-201ENST00000216414 DDRGK1Q96HY6 314 aa7.17□□□□□ -1.26
CDKN3-201ENST00000216414 FAM117AQ9C073 453 aa7.17□□□□□ -1.26
CDKN3-201ENST00000216414 GPSM3Q9Y4H4 160 aa7.17□□□□□ -1.26
CDKN3-201ENST00000216414 USP17L8P0C7I0 530 aa7.16□□□□□ -1.26
CDKN3-201ENST00000216414 SRSF11Q05519 484 aaKnown RBP7.16□□□□□ -1.26
CDKN3-201ENST00000216414 RNF217Q8TC41 542 aa7.16□□□□□ -1.26
CDKN3-201ENST00000216414 ADH1AP07327 375 aa7.15□□□□□ -1.26
CDKN3-201ENST00000216414 HMX1Q9NP08 348 aaPredicted RBP7.15□□□□□ -1.26
CDKN3-201ENST00000216414 ERVH48-1M5A8F1 160 aa7.14□□□□□ -1.27
CDKN3-201ENST00000216414 CELA2BP08218 269 aaPredicted RBP7.14□□□□□ -1.27
CDKN3-201ENST00000216414 PLA2G4EQ3MJ16 856 aa7.14□□□□□ -1.27
CDKN3-201ENST00000216414 PODNQ7Z5L7 613 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms