RNA–Protein interactions for RNA: ENST00000214869.6

TMED1-201, Transcript of transmembrane p24 trafficking protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED1, Length 1,340 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-201ENST00000214869 IP6K1Q92551 441 aa20.89■□□□□ 0.93
TMED1-201ENST00000214869 COL18A1P39060 1754 aa20.89■□□□□ 0.93
TMED1-201ENST00000214869 PHLPP1O60346 1717 aa20.88■□□□□ 0.93
TMED1-201ENST00000214869 U2AF1L5P0DN76 240 aaPredicted RBP20.88■□□□□ 0.93
TMED1-201ENST00000214869 U2AF1Q01081 240 aaKnown RBP eCLIP20.88■□□□□ 0.93
TMED1-201ENST00000214869 EIF4A2Q14240 407 aaKnown RBP20.88■□□□□ 0.93
TMED1-201ENST00000214869 NGEFQ8N5V2 710 aa20.88■□□□□ 0.93
TMED1-201ENST00000214869 COL16A1Q07092 1604 aaPredicted RBP20.88■□□□□ 0.93
TMED1-201ENST00000214869 FCHSD2O94868 740 aa20.87■□□□□ 0.93
TMED1-201ENST00000214869 NCBP3Q53F19 620 aaKnown RBP20.87■□□□□ 0.93
TMED1-201ENST00000214869 RUNDC1Q96C34 613 aa20.87■□□□□ 0.93
TMED1-201ENST00000214869 CPDO75976 1380 aa20.87■□□□□ 0.93
TMED1-201ENST00000214869 U2SURPO15042 1029 aaKnown RBP20.86■□□□□ 0.93
TMED1-201ENST00000214869 PIP4K2BP78356 416 aa20.86■□□□□ 0.93
TMED1-201ENST00000214869 PNNQ9H307 717 aaKnown RBP20.86■□□□□ 0.93
TMED1-201ENST00000214869 LRRC59Q96AG4 307 aaKnown RBP20.85■□□□□ 0.93
TMED1-201ENST00000214869 PLEKHF1Q96S99 279 aa20.84■□□□□ 0.93
TMED1-201ENST00000214869 RGPD5Q99666 1765 aa20.84■□□□□ 0.93
TMED1-201ENST00000214869 RSPH6AQ9H0K4 717 aa20.83■□□□□ 0.93
TMED1-201ENST00000214869 CCDC146Q8IYE0 955 aa20.82■□□□□ 0.92
TMED1-201ENST00000214869 KDRP35968 1356 aa20.81■□□□□ 0.92
TMED1-201ENST00000214869 IGSF1Q8N6C5 1336 aa20.81■□□□□ 0.92
TMED1-201ENST00000214869 APAF1O14727 1248 aa20.8■□□□□ 0.92
TMED1-201ENST00000214869 CABLES1Q8TDN4 633 aa20.8■□□□□ 0.92
TMED1-201ENST00000214869 CAMTA1Q9Y6Y1 1673 aa20.8■□□□□ 0.92
TMED1-201ENST00000214869 FAM208AQ9UK61 1670 aaKnown RBP20.79■□□□□ 0.92
TMED1-201ENST00000214869 HSPA1LP34931 641 aa20.79■□□□□ 0.92
TMED1-201ENST00000214869 ZNF521Q96K83 1311 aa20.79■□□□□ 0.92
TMED1-201ENST00000214869 ILDR2Q71H61 639 aa20.78■□□□□ 0.92
TMED1-201ENST00000214869 NCAPD2Q15021 1401 aa20.78■□□□□ 0.92
TMED1-201ENST00000214869 LMO7Q8WWI1 1683 aa20.78■□□□□ 0.92
TMED1-201ENST00000214869 RGPD2P0DJD1 1756 aa20.78■□□□□ 0.92
TMED1-201ENST00000214869 PDE3BQ13370 1112 aa20.78■□□□□ 0.92
TMED1-201ENST00000214869 TCP11L2Q8N4U5 519 aa20.78■□□□□ 0.92
TMED1-201ENST00000214869 PHF23Q9BUL5 403 aaPredicted RBP20.78■□□□□ 0.92
TMED1-201ENST00000214869 ZC3H6P61129 1189 aaKnown RBP20.77■□□□□ 0.91
TMED1-201ENST00000214869 CCDC27Q2M243 656 aa20.77■□□□□ 0.91
TMED1-201ENST00000214869 EYA1Q99502 592 aa20.77■□□□□ 0.91
TMED1-201ENST00000214869 KIAA0232Q92628 1395 aa20.76■□□□□ 0.91
TMED1-201ENST00000214869 PRKAR2BP31323 418 aa20.76■□□□□ 0.91
TMED1-201ENST00000214869 HMOX1P09601 288 aa20.75■□□□□ 0.91
TMED1-201ENST00000214869 MAPK8IP3Q9UPT6 1336 aa20.74■□□□□ 0.91
TMED1-201ENST00000214869 SULT6B1Q6IMI4 303 aa20.74■□□□□ 0.91
TMED1-201ENST00000214869 AXIN2Q9Y2T1 843 aa20.74■□□□□ 0.91
TMED1-201ENST00000214869 DLG5Q8TDM6 1919 aa20.73■□□□□ 0.91
TMED1-201ENST00000214869 PLEKHG5O94827 1062 aa20.73■□□□□ 0.91
TMED1-201ENST00000214869 TMPOP42166 694 aaKnown RBP20.73■□□□□ 0.91
TMED1-201ENST00000214869 AEBP1Q8IUX7 1158 aa20.73■□□□□ 0.91
TMED1-201ENST00000214869 ANKRD24Q8TF21 1146 aa20.72■□□□□ 0.91
TMED1-201ENST00000214869 COL14A1Q05707 1796 aaKnown RBP20.72■□□□□ 0.91
TMED1-201ENST00000214869 ERBB3P21860 1342 aa20.71■□□□□ 0.91
TMED1-201ENST00000214869 ZBTB7CA1YPR0 619 aa20.71■□□□□ 0.91
TMED1-201ENST00000214869 NEFMP07197 916 aa20.71■□□□□ 0.91
TMED1-201ENST00000214869 PHACTR3Q96KR7 559 aa20.71■□□□□ 0.91
TMED1-201ENST00000214869 NFE2L2Q16236 605 aa20.7■□□□□ 0.9
TMED1-201ENST00000214869 LTV1Q96GA3 475 aaPredicted RBP20.7■□□□□ 0.9
TMED1-201ENST00000214869 PRDM11Q9NQV5 511 aa20.7■□□□□ 0.9
TMED1-201ENST00000214869 SENP3-EIF4A1A0A087X0R7 540 aa20.69■□□□□ 0.9
TMED1-201ENST00000214869 SOCS7O14512 581 aa20.69■□□□□ 0.9
TMED1-201ENST00000214869 HAP1P54257 671 aaPredicted RBP20.69■□□□□ 0.9
TMED1-201ENST00000214869 NBPF6Q5VWK0 638 aa20.69■□□□□ 0.9
TMED1-201ENST00000214869 WWC1Q8IX03 1113 aa20.69■□□□□ 0.9
TMED1-201ENST00000214869 NBPF4Q96M43 638 aa20.69■□□□□ 0.9
TMED1-201ENST00000214869 SALL2Q9Y467 1007 aaPredicted RBP20.69■□□□□ 0.9
TMED1-201ENST00000214869 PLEKHG2Q9H7P9 1386 aa20.68■□□□□ 0.9
TMED1-201ENST00000214869 CHRNA2Q15822 529 aa20.67■□□□□ 0.9
TMED1-201ENST00000214869 WDR63Q8IWG1 891 aa20.67■□□□□ 0.9
TMED1-201ENST00000214869 GOLGA2Q08379 1002 aa20.66■□□□□ 0.9
TMED1-201ENST00000214869 TRIM35Q9UPQ4 493 aa20.66■□□□□ 0.9
TMED1-201ENST00000214869 RRP7AQ9Y3A4 280 aaKnown RBP20.66■□□□□ 0.9
TMED1-201ENST00000214869 COL5A2P05997 1499 aaPredicted RBP20.65■□□□□ 0.9
TMED1-201ENST00000214869 TRMT2AQ8IZ69 625 aaKnown RBP20.65■□□□□ 0.9
TMED1-201ENST00000214869 JCADQ9P266 1359 aa20.65■□□□□ 0.9
TMED1-201ENST00000214869 FAM83GA6ND36 823 aa20.64■□□□□ 0.89
TMED1-201ENST00000214869 RIPK4P57078 832 aa20.64■□□□□ 0.89
TMED1-201ENST00000214869 SLFN5Q08AF3 891 aa20.63■□□□□ 0.89
TMED1-201ENST00000214869 IL16Q14005 1332 aa20.63■□□□□ 0.89
TMED1-201ENST00000214869 LMOD3Q0VAK6 560 aa20.62■□□□□ 0.89
TMED1-201ENST00000214869 NEUROD2Q15784 382 aa20.62■□□□□ 0.89
TMED1-201ENST00000214869 CDCA7LQ96GN5 454 aa20.62■□□□□ 0.89
TMED1-201ENST00000214869 WDR17Q8IZU2 1322 aa20.62■□□□□ 0.89
TMED1-201ENST00000214869 E9PSI1 815 aa20.61■□□□□ 0.89
TMED1-201ENST00000214869 PLCH1Q4KWH8 1693 aa20.61■□□□□ 0.89
TMED1-201ENST00000214869 NWD2Q9ULI1 1742 aa20.61■□□□□ 0.89
TMED1-201ENST00000214869 USHBP1Q8N6Y0 703 aa20.6■□□□□ 0.89
TMED1-201ENST00000214869 GAS2L2Q8NHY3 880 aa20.6■□□□□ 0.89
TMED1-201ENST00000214869 NRAPQ86VF7 1730 aa20.58■□□□□ 0.89
TMED1-201ENST00000214869 HTATSF1O43719 755 aaKnown RBP20.58■□□□□ 0.89
TMED1-201ENST00000214869 MTHFSDQ2M296 383 aaKnown RBP20.58■□□□□ 0.89
TMED1-201ENST00000214869 DUSP27Q5VZP5 1158 aa20.58■□□□□ 0.89
TMED1-201ENST00000214869 NLRP2Q9NX02 1062 aa20.58■□□□□ 0.89
TMED1-201ENST00000214869 PKD1L3Q7Z443 1732 aa20.58■□□□□ 0.88
TMED1-201ENST00000214869 SPATA31A6Q5VVP1 1343 aa20.57■□□□□ 0.88
TMED1-201ENST00000214869 CSB-PGBD3P0DP91 1061 aa20.57■□□□□ 0.88
TMED1-201ENST00000214869 CALD1Q05682 793 aaKnown RBP20.57■□□□□ 0.88
TMED1-201ENST00000214869 AMOTQ4VCS5 1084 aa20.56■□□□□ 0.88
TMED1-201ENST00000214869 CARD10Q9BWT7 1032 aa20.56■□□□□ 0.88
TMED1-201ENST00000214869 SPINK5Q9NQ38 1064 aaPredicted RBP20.56■□□□□ 0.88
TMED1-201ENST00000214869 PARP4Q9UKK3 1724 aaKnown RBP20.56■□□□□ 0.88
TMED1-201ENST00000214869 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms