RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 JAKMIP1Q96N16 626 aaKnown RBP16.21■□□□□ 0.19
TGFBR3-201ENST00000212355 KRT18P05783 430 aaKnown RBP16.21■□□□□ 0.18
TGFBR3-201ENST00000212355 EXOC6BQ9Y2D4 811 aa16.2■□□□□ 0.18
TGFBR3-201ENST00000212355 MIA2Q96PC5 1412 aa16.2■□□□□ 0.18
TGFBR3-201ENST00000212355 USHBP1Q8N6Y0 703 aa16.2■□□□□ 0.18
TGFBR3-201ENST00000212355 H0YHG0 523 aa16.2■□□□□ 0.18
TGFBR3-201ENST00000212355 SYCE3A1L190 88 aa16.2■□□□□ 0.18
TGFBR3-201ENST00000212355 FERMT3Q86UX7 667 aa16.2■□□□□ 0.18
TGFBR3-201ENST00000212355 TMEM57Q8N5G2 664 aa16.2■□□□□ 0.18
TGFBR3-201ENST00000212355 TANGO6Q9C0B7 1094 aa16.2■□□□□ 0.18
TGFBR3-201ENST00000212355 CYP46A1Q9Y6A2 500 aa16.19■□□□□ 0.18
TGFBR3-201ENST00000212355 MCM10Q7L590 875 aa16.19■□□□□ 0.18
TGFBR3-201ENST00000212355 GNAI3P08754 354 aa16.19■□□□□ 0.18
TGFBR3-201ENST00000212355 LARP1BQ659C4 914 aaKnown RBP16.19■□□□□ 0.18
TGFBR3-201ENST00000212355 ZBTB9Q96C00 473 aa16.19■□□□□ 0.18
TGFBR3-201ENST00000212355 CCDC173Q0VFZ6 552 aa16.18■□□□□ 0.18
TGFBR3-201ENST00000212355 MAGEC2Q9UBF1 373 aaPredicted RBP16.18■□□□□ 0.18
TGFBR3-201ENST00000212355 XBP1P17861 261 aa16.18■□□□□ 0.18
TGFBR3-201ENST00000212355 GUCY1B3Q02153 619 aa16.18■□□□□ 0.18
TGFBR3-201ENST00000212355 CABP4P57796 275 aa16.18■□□□□ 0.18
TGFBR3-201ENST00000212355 RABEP1Q15276 862 aa16.18■□□□□ 0.18
TGFBR3-201ENST00000212355 SRGAP3O43295 1099 aa16.18■□□□□ 0.18
TGFBR3-201ENST00000212355 MVPQ14764 893 aaKnown RBP16.18■□□□□ 0.18
TGFBR3-201ENST00000212355 SLC26A8Q96RN1 970 aa16.17■□□□□ 0.18
TGFBR3-201ENST00000212355 FILIP1Q7Z7B0 1213 aa16.17■□□□□ 0.18
TGFBR3-201ENST00000212355 PNISRQ8TF01 805 aaKnown RBP16.17■□□□□ 0.18
TGFBR3-201ENST00000212355 CCDC158Q5M9N0 1113 aa16.17■□□□□ 0.18
TGFBR3-201ENST00000212355 SEPT11Q9NVA2 429 aaKnown RBP16.16■□□□□ 0.18
TGFBR3-201ENST00000212355 CASTP20810 708 aaKnown RBP16.16■□□□□ 0.18
TGFBR3-201ENST00000212355 RBM5P52756 815 aaKnown RBP eCLIP16.16■□□□□ 0.18
TGFBR3-201ENST00000212355 SART3Q15020 963 aaKnown RBP16.16■□□□□ 0.18
TGFBR3-201ENST00000212355 PDRG1Q9NUG6 133 aa16.16■□□□□ 0.18
TGFBR3-201ENST00000212355 CUX1P39880 1505 aa16.16■□□□□ 0.18
TGFBR3-201ENST00000212355 SLC4A8Q2Y0W8 1093 aa16.16■□□□□ 0.18
TGFBR3-201ENST00000212355 CCDC69A6NI79 296 aa16.16■□□□□ 0.18
TGFBR3-201ENST00000212355 SSBP05455 408 aaKnown RBP eCLIP16.16■□□□□ 0.18
TGFBR3-201ENST00000212355 ATF7IPQ6VMQ6 1270 aa16.16■□□□□ 0.18
TGFBR3-201ENST00000212355 GAS2L2Q8NHY3 880 aa16.15■□□□□ 0.18
TGFBR3-201ENST00000212355 TSPYL1Q9H0U9 437 aa16.15■□□□□ 0.18
TGFBR3-201ENST00000212355 ZNF530Q6P9A1 599 aaPredicted RBP16.15■□□□□ 0.18
TGFBR3-201ENST00000212355 GCC1Q96CN9 775 aa16.15■□□□□ 0.18
TGFBR3-201ENST00000212355 TOM1L2Q6ZVM7 507 aa16.15■□□□□ 0.18
TGFBR3-201ENST00000212355 ARAP1Q96P48 1450 aa16.15■□□□□ 0.18
TGFBR3-201ENST00000212355 PLEKHO1Q53GL0 409 aaPredicted RBP16.15■□□□□ 0.18
TGFBR3-201ENST00000212355 TSHZ3Q63HK5 1081 aa16.15■□□□□ 0.18
TGFBR3-201ENST00000212355 CCDC83Q8IWF9 413 aa16.14■□□□□ 0.18
TGFBR3-201ENST00000212355 BTBD11A6QL63 1104 aa16.14■□□□□ 0.17
TGFBR3-201ENST00000212355 UPF3BQ9BZI7 483 aaKnown RBP16.14■□□□□ 0.17
TGFBR3-201ENST00000212355 CCDC82Q8N4S0 544 aa16.14■□□□□ 0.17
TGFBR3-201ENST00000212355 SPATA32Q96LK8 384 aa16.14■□□□□ 0.17
TGFBR3-201ENST00000212355 ZNF396Q96N95 335 aaPredicted RBP16.14■□□□□ 0.17
TGFBR3-201ENST00000212355 F6X3S4 739 aa16.13■□□□□ 0.17
TGFBR3-201ENST00000212355 FILIP1LQ4L180 1135 aa16.13■□□□□ 0.17
TGFBR3-201ENST00000212355 ZC3H6P61129 1189 aaKnown RBP16.13■□□□□ 0.17
TGFBR3-201ENST00000212355 GDPD2Q9HCC8 539 aa16.13■□□□□ 0.17
TGFBR3-201ENST00000212355 CCDC192P0DO97 292 aa16.13■□□□□ 0.17
TGFBR3-201ENST00000212355 DHX8Q14562 1220 aaKnown RBP16.13■□□□□ 0.17
TGFBR3-201ENST00000212355 ANKRD62A6NC57 917 aa16.13■□□□□ 0.17
TGFBR3-201ENST00000212355 OSCARQ8IYS5 282 aa16.13■□□□□ 0.17
TGFBR3-201ENST00000212355 DEF6Q9H4E7 631 aa16.13■□□□□ 0.17
TGFBR3-201ENST00000212355 ACBD3Q9H3P7 528 aa16.12■□□□□ 0.17
TGFBR3-201ENST00000212355 LETM1O95202 739 aaPredicted RBP16.12■□□□□ 0.17
TGFBR3-201ENST00000212355 HSP90AB3PQ58FF7 597 aa16.12■□□□□ 0.17
TGFBR3-201ENST00000212355 MBD3O95983 291 aa16.12■□□□□ 0.17
TGFBR3-201ENST00000212355 PROSER2Q86WR7 435 aaPredicted RBP16.12■□□□□ 0.17
TGFBR3-201ENST00000212355 RAB11FIP4Q86YS3 637 aa16.11■□□□□ 0.17
TGFBR3-201ENST00000212355 CCAR1Q8IX12 1150 aaKnown RBP16.11■□□□□ 0.17
TGFBR3-201ENST00000212355 SMARCE1Q969G3 411 aa16.11■□□□□ 0.17
TGFBR3-201ENST00000212355 SRCIN1Q9C0H9 1055 aa16.11■□□□□ 0.17
TGFBR3-201ENST00000212355 DNA2P51530 1060 aa16.11■□□□□ 0.17
TGFBR3-201ENST00000212355 USP5P45974 858 aa16.11■□□□□ 0.17
TGFBR3-201ENST00000212355 WAPLQ7Z5K2 1190 aa16.11■□□□□ 0.17
TGFBR3-201ENST00000212355 ERBINQ96RT1 1412 aa16.11■□□□□ 0.17
TGFBR3-201ENST00000212355 NOM1Q5C9Z4 860 aaKnown RBP16.11■□□□□ 0.17
TGFBR3-201ENST00000212355 PIP4K2BP78356 416 aa16.11■□□□□ 0.17
TGFBR3-201ENST00000212355 TAF3Q5VWG9 929 aa16.11■□□□□ 0.17
TGFBR3-201ENST00000212355 JARID2Q92833 1246 aaPredicted RBP16.11■□□□□ 0.17
TGFBR3-201ENST00000212355 IDH1O75874 414 aaKnown RBP16.1■□□□□ 0.17
TGFBR3-201ENST00000212355 TAX1BP1Q86VP1 789 aa16.1■□□□□ 0.17
TGFBR3-201ENST00000212355 PPFIBP1Q86W92 1011 aa16.1■□□□□ 0.17
TGFBR3-201ENST00000212355 NEFHP12036 1026 aa16.1■□□□□ 0.17
TGFBR3-201ENST00000212355 MCM4P33991 863 aa16.1■□□□□ 0.17
TGFBR3-201ENST00000212355 CT47B1P0C2W7 299 aaPredicted RBP16.1■□□□□ 0.17
TGFBR3-201ENST00000212355 TATP17735 454 aaPredicted RBP16.1■□□□□ 0.17
TGFBR3-201ENST00000212355 PDE3AQ14432 1141 aa16.1■□□□□ 0.17
TGFBR3-201ENST00000212355 GPRASP1Q5JY77 1395 aa16.1■□□□□ 0.17
TGFBR3-201ENST00000212355 CBX1P83916 185 aa16.09■□□□□ 0.17
TGFBR3-201ENST00000212355 TDO2P48775 406 aa16.09■□□□□ 0.17
TGFBR3-201ENST00000212355 ISM2Q6H9L7 571 aa16.09■□□□□ 0.17
TGFBR3-201ENST00000212355 PRPF40BQ6NWY9 871 aaKnown RBP16.09■□□□□ 0.17
TGFBR3-201ENST00000212355 BOLA2Q9H3K6 86 aa16.09■□□□□ 0.17
TGFBR3-201ENST00000212355 KRI1Q8N9T8 703 aaKnown RBP16.09■□□□□ 0.17
TGFBR3-201ENST00000212355 TRERF1Q96PN7 1200 aa16.09■□□□□ 0.17
TGFBR3-201ENST00000212355 RAPGEF3O95398 923 aa16.09■□□□□ 0.17
TGFBR3-201ENST00000212355 FBLN1P23142 703 aa16.09■□□□□ 0.17
TGFBR3-201ENST00000212355 CCDC57Q2TAC2 916 aa16.09■□□□□ 0.17
TGFBR3-201ENST00000212355 PRG4Q92954 1404 aaPredicted RBP16.09■□□□□ 0.17
TGFBR3-201ENST00000212355 TXLNAP40222 546 aa16.09■□□□□ 0.17
TGFBR3-201ENST00000212355 ENOX2Q16206 610 aaKnown RBP16.09■□□□□ 0.17
TGFBR3-201ENST00000212355 BLOC1S2Q6QNY1 142 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms