RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 OVOS2A0A0J9YW53 1432 aa13.81□□□□□ -0.2
CD4-201ENST00000011653 OVOS2Q6IE36 1432 aa13.81□□□□□ -0.2
CD4-201ENST00000011653 MAPK8IP3Q9UPT6 1336 aa13.8□□□□□ -0.2
CD4-201ENST00000011653 TCP11L2Q8N4U5 519 aa13.8□□□□□ -0.2
CD4-201ENST00000011653 DCCP43146 1447 aa13.8□□□□□ -0.2
CD4-201ENST00000011653 NCOA3Q9Y6Q9 1424 aa13.8□□□□□ -0.2
CD4-201ENST00000011653 TOM1O60784 492 aa13.79□□□□□ -0.2
CD4-201ENST00000011653 NEFMP07197 916 aa13.79□□□□□ -0.2
CD4-201ENST00000011653 LRRC59Q96AG4 307 aaKnown RBP13.79□□□□□ -0.2
CD4-201ENST00000011653 NUTM2BA6NNL0 878 aaPredicted RBP13.78□□□□□ -0.2
CD4-201ENST00000011653 NUTM2EB1AL46 878 aaPredicted RBP13.78□□□□□ -0.2
CD4-201ENST00000011653 NUTM2AQ8IVF1 878 aaPredicted RBP13.78□□□□□ -0.2
CD4-201ENST00000011653 HOXC9P31274 260 aa13.78□□□□□ -0.2
CD4-201ENST00000011653 IL13P35225 146 aa13.78□□□□□ -0.2
CD4-201ENST00000011653 CSB-PGBD3P0DP91 1061 aa13.77□□□□□ -0.2
CD4-201ENST00000011653 PIK3C2AO00443 1686 aa13.77□□□□□ -0.2
CD4-201ENST00000011653 KCNH5Q8NCM2 988 aa13.77□□□□□ -0.21
CD4-201ENST00000011653 RUNDC1Q96C34 613 aa13.77□□□□□ -0.21
CD4-201ENST00000011653 SPATA31A3Q5VYP0 1347 aa13.77□□□□□ -0.21
CD4-201ENST00000011653 PHACTR3Q96KR7 559 aa13.77□□□□□ -0.21
CD4-201ENST00000011653 AXIN2Q9Y2T1 843 aa13.76□□□□□ -0.21
CD4-201ENST00000011653 PRDM11Q9NQV5 511 aa13.76□□□□□ -0.21
CD4-201ENST00000011653 ADAMTS2O95450 1211 aa13.75□□□□□ -0.21
CD4-201ENST00000011653 AATKQ6ZMQ8 1374 aa13.75□□□□□ -0.21
CD4-201ENST00000011653 USP31Q70CQ4 1352 aa13.75□□□□□ -0.21
CD4-201ENST00000011653 EYA1Q99502 592 aa13.75□□□□□ -0.21
CD4-201ENST00000011653 USP35Q9P2H5 1018 aa13.75□□□□□ -0.21
CD4-201ENST00000011653 LAS1LQ9Y4W2 734 aaKnown RBP13.75□□□□□ -0.21
CD4-201ENST00000011653 NRKQ7Z2Y5 1582 aa13.75□□□□□ -0.21
CD4-201ENST00000011653 STRN4Q9NRL3 753 aa13.75□□□□□ -0.21
CD4-201ENST00000011653 THUMPD2Q9BTF0 503 aaKnown RBP13.74□□□□□ -0.21
CD4-201ENST00000011653 FLT4P35916 1363 aa13.74□□□□□ -0.21
CD4-201ENST00000011653 RIPK4P57078 832 aa13.74□□□□□ -0.21
CD4-201ENST00000011653 UBE2Q2Q8WVN8 375 aa13.74□□□□□ -0.21
CD4-201ENST00000011653 NLRP2Q9NX02 1062 aa13.74□□□□□ -0.21
CD4-201ENST00000011653 SBNO1A3KN83 1393 aa13.73□□□□□ -0.21
CD4-201ENST00000011653 LTBP4Q8N2S1 1624 aa13.73□□□□□ -0.21
CD4-201ENST00000011653 ARHGEF25Q86VW2 580 aa13.73□□□□□ -0.21
CD4-201ENST00000011653 ANKRD26Q9UPS8 1709 aa13.73□□□□□ -0.21
CD4-201ENST00000011653 TNS3Q68CZ2 1445 aa13.73□□□□□ -0.21
CD4-201ENST00000011653 SOS2Q07890 1332 aaPredicted RBP13.73□□□□□ -0.21
CD4-201ENST00000011653 DCTN1Q14203 1278 aa13.73□□□□□ -0.21
CD4-201ENST00000011653 ANKRD24Q8TF21 1146 aa13.73□□□□□ -0.21
CD4-201ENST00000011653 KIAA0232Q92628 1395 aa13.72□□□□□ -0.21
CD4-201ENST00000011653 IP6K1Q92551 441 aa13.72□□□□□ -0.21
CD4-201ENST00000011653 RSPH6AQ9H0K4 717 aa13.72□□□□□ -0.21
CD4-201ENST00000011653 PNPLA6Q8IY17 1366 aa13.72□□□□□ -0.21
CD4-201ENST00000011653 CERKQ8TCT0 537 aa13.72□□□□□ -0.21
CD4-201ENST00000011653 NBPF6Q5VWK0 638 aa13.71□□□□□ -0.21
CD4-201ENST00000011653 NBPF4Q96M43 638 aa13.71□□□□□ -0.21
CD4-201ENST00000011653 FAM83GA6ND36 823 aa13.71□□□□□ -0.21
CD4-201ENST00000011653 FCHSD2O94868 740 aa13.71□□□□□ -0.21
CD4-201ENST00000011653 TMPOP42166 694 aaKnown RBP13.71□□□□□ -0.21
CD4-201ENST00000011653 SPINK5Q9NQ38 1064 aaPredicted RBP13.71□□□□□ -0.21
CD4-201ENST00000011653 PKNOX2Q96KN3 472 aa13.7□□□□□ -0.22
CD4-201ENST00000011653 COL3A1P02461 1466 aaPredicted RBP13.7□□□□□ -0.22
CD4-201ENST00000011653 CDK12Q9NYV4 1490 aaPredicted RBP13.7□□□□□ -0.22
CD4-201ENST00000011653 BLMP54132 1417 aaPredicted RBP13.7□□□□□ -0.22
CD4-201ENST00000011653 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.7□□□□□ -0.22
CD4-201ENST00000011653 PXDNQ92626 1479 aa13.69□□□□□ -0.22
CD4-201ENST00000011653 GOLGA2Q08379 1002 aa13.69□□□□□ -0.22
CD4-201ENST00000011653 WWC1Q8IX03 1113 aa13.69□□□□□ -0.22
CD4-201ENST00000011653 PLEKHF1Q96S99 279 aa13.69□□□□□ -0.22
CD4-201ENST00000011653 NOP58Q9Y2X3 529 aaKnown RBP13.69□□□□□ -0.22
CD4-201ENST00000011653 KIF1AQ12756 1690 aa13.69□□□□□ -0.22
CD4-201ENST00000011653 EVA1CP58658 441 aa13.69□□□□□ -0.22
CD4-201ENST00000011653 ARHGEF10O15013 1369 aa13.69□□□□□ -0.22
CD4-201ENST00000011653 USP19O94966 1318 aa13.68□□□□□ -0.22
CD4-201ENST00000011653 SHPRHQ149N8 1683 aa13.68□□□□□ -0.22
CD4-201ENST00000011653 PEAK1Q9H792 1746 aa13.68□□□□□ -0.22
CD4-201ENST00000011653 PNNQ9H307 717 aaKnown RBP13.67□□□□□ -0.22
CD4-201ENST00000011653 ANP32AP39687 249 aaKnown RBP13.67□□□□□ -0.22
CD4-201ENST00000011653 RRP1P56182 461 aaKnown RBP13.67□□□□□ -0.22
CD4-201ENST00000011653 TOM1L2Q6ZVM7 507 aa13.67□□□□□ -0.22
CD4-201ENST00000011653 TSR2Q969E8 191 aaKnown RBP13.67□□□□□ -0.22
CD4-201ENST00000011653 INSRP06213 1382 aa13.67□□□□□ -0.22
CD4-201ENST00000011653 MCM10Q7L590 875 aa13.66□□□□□ -0.22
CD4-201ENST00000011653 ROBO1Q9Y6N7 1651 aa13.66□□□□□ -0.22
CD4-201ENST00000011653 PDE3BQ13370 1112 aa13.66□□□□□ -0.22
CD4-201ENST00000011653 MED1Q15648 1581 aaPredicted RBP13.65□□□□□ -0.22
CD4-201ENST00000011653 MTHFSDQ2M296 383 aaKnown RBP13.65□□□□□ -0.22
CD4-201ENST00000011653 BTG4Q9NY30 223 aa13.65□□□□□ -0.22
CD4-201ENST00000011653 RCAN3Q9UKA8 241 aa13.65□□□□□ -0.22
CD4-201ENST00000011653 CCDC9Q9Y3X0 531 aaKnown RBP13.65□□□□□ -0.22
CD4-201ENST00000011653 TRPM3Q9HCF6 1732 aaPredicted RBP13.65□□□□□ -0.22
CD4-201ENST00000011653 NFE2L2Q16236 605 aa13.64□□□□□ -0.23
CD4-201ENST00000011653 ELL2O00472 640 aaPredicted RBP13.64□□□□□ -0.23
CD4-201ENST00000011653 TRIM35Q9UPQ4 493 aa13.64□□□□□ -0.23
CD4-201ENST00000011653 MIS18AQ9NYP9 233 aa13.64□□□□□ -0.23
CD4-201ENST00000011653 ERBB3P21860 1342 aa13.63□□□□□ -0.23
CD4-201ENST00000011653 NFAT5O94916 1531 aa13.63□□□□□ -0.23
CD4-201ENST00000011653 IGSF1Q8N6C5 1336 aa13.62□□□□□ -0.23
CD4-201ENST00000011653 LTN1O94822 1766 aa13.62□□□□□ -0.23
CD4-201ENST00000011653 HSPA1LP34931 641 aa13.62□□□□□ -0.23
CD4-201ENST00000011653 LARP1Q6PKG0 1096 aaKnown RBP13.62□□□□□ -0.23
CD4-201ENST00000011653 RTF1Q92541 710 aaKnown RBP13.62□□□□□ -0.23
CD4-201ENST00000011653 BCL2L13Q9BXK5 485 aa13.62□□□□□ -0.23
CD4-201ENST00000011653 MARF1Q9Y4F3 1742 aaKnown RBP13.62□□□□□ -0.23
CD4-201ENST00000011653 RAPGEF4Q8WZA2 1011 aa13.62□□□□□ -0.23
CD4-201ENST00000011653 A0A0G2JS52 829 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms