RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Ercc6lQ8BHK9 1240 aa16.86■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Arglu1Q3UL36 271 aaKnown RBP16.86■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Ccdc181Q80ZU5 509 aa16.86■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Map3k1P53349 1493 aa16.86■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Gnl2Q99LH1 728 aaKnown RBP16.86■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Bcl2l13P59017 434 aa16.85■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Gbp4Q61107 620 aa16.85■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Cdkl5Q3UTQ8 938 aa16.84■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Ptpdc1Q6NZK8 747 aa16.84■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Maco1Q7TQE6 664 aaKnown RBP16.84■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 TatQ8QZR1 454 aa16.84■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Commd10Q8JZY2 202 aa16.84■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Larp1Q6ZQ58 1072 aaKnown RBP16.84■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Tspyl2Q7TQI8 677 aa16.84■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Fsd1Q7TPM6 496 aa16.83■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Dhx9O70133 1380 aaKnown RBP16.83■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 BcanQ61361 883 aa16.83■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Slc13a4Q8BZ82 625 aa16.83■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Tiam1Q60610 1591 aa16.83■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Pafah1b1P63005 410 aaKnown RBP16.83■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Map4k4P97820 1233 aaKnown RBP16.83■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Ddx19aQ61655 478 aaKnown RBP16.83■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 PrxO55103 1391 aa16.82■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Soga1E1U8D0 1418 aa16.82■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 TefQ9JLC6 301 aa16.82■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Sos1Q62245 1319 aa16.82■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Erc1Q99MI1 1120 aa16.82■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Cabp2Q9JLK4 216 aa16.82■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Il16O54824 1322 aa16.82■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Aldh1l1Q8R0Y6 902 aa16.82■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 NrkQ9R0G8 1455 aa16.81■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Nol8Q3UHX0 1147 aaKnown RBP16.81■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Cc2d2aQ8CFW7 1633 aa16.81■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 MpripP97434 1024 aa16.81■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 ScaperF8VQ70 1398 aaKnown RBP16.8■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Paxbp1P58501 919 aa16.8■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Gm10471E9Q1C7 252 aa16.8■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Q9D9H8 365 aa16.8■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Adck5Q80V03 582 aa16.8■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Gm42641I6L9G2 585 aa16.8■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Rnf187Q8BFX1 236 aa16.8■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 AtripQ8BMG1 785 aa16.8■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Prl7d1P04769 244 aa16.79■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Lmbr1Q9JIT0 490 aa16.79■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Cpa2Q504N0 417 aa16.79■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 LarsQ8BMJ2 1178 aa16.79■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Stard3nlQ9DCI3 235 aa16.79■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Abl1P00520 1123 aa16.79■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Ehmt1Q5DW34 1296 aa16.79■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Cyp26c1B2RXA7 518 aa16.79■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Terf2O35144 541 aa16.79■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Trim25Q61510 634 aaKnown RBP16.78■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Rufy2Q8R4C2 606 aa16.78■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 BbxQ8VBW5 907 aa16.78■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Fez2Q6TYB5 348 aa16.78■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 4931400O07RikQ9D4M5 137 aa16.77■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Phlpp2Q8BXA7 1320 aa16.77■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Hdgfl1Q2VPR5 283 aa16.77■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Abcf1Q6P542 837 aaKnown RBP16.77■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Asxl1P59598 1514 aa16.77■□□□□ 0.28
Pcdha8-201ENSMUST00000194038 Irgm2A0A140LIF8 407 aa16.77■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Fkbp4P30416 458 aa16.77■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Secisbp2lQ6A098 1086 aaKnown RBP16.77■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Maats1Q8BRC6 783 aa16.77■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Lrrc45Q8CIM1 670 aa16.77■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 IbtkQ6ZPR6 1352 aaKnown RBP16.77■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Uri1Q3TLD5 531 aa16.77■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Cep89Q9CZX2 791 aa16.77■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Sass6Q80UK7 654 aa16.76■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Ncbp3Q8BZR9 615 aaKnown RBP16.76■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Wasf1Q8R5H6 559 aa16.76■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Kank1E9Q238 1360 aa16.76■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Arhgap5P97393 1501 aa16.76■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Gm7361D3Z6R1 267 aa16.76■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 TbcaP48428 108 aaKnown RBP16.76■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Cct4P80315 539 aaKnown RBP16.76■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Gjb2Q00977 226 aa16.76■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Cnnm1Q0GA42 951 aa16.76■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Bag4Q8CI61 457 aa16.76■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Pms1Q8K119 917 aa16.76■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Washc4Q3UMB9 1173 aa16.75■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Pof1bQ8K4L4 587 aa16.75■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 PalmQ9Z0P4 383 aa16.75■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Jakmip3Q5DTN8 844 aa16.75■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 ImmtQ8CAQ8 757 aaKnown RBP16.75■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Krt84Q99M73 603 aa16.75■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Gm21671G3UY31 267 aa16.75■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Adcy5P84309 1262 aa16.74■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Fsd2Q8BZ52 692 aa16.74■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Sel1lQ9Z2G6 790 aa16.74■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Rad54l2Q99NG0 1466 aa16.74■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Zscan20B2KFW1 1030 aa16.74■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Zkscan7E9PVW1 718 aa16.74■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Smc1bQ920F6 1248 aa16.74■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Eva1cP58659 440 aa16.74■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Prm3Q62100 101 aa16.74■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Ccdc191J3QQ27 883 aa16.73■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Mcm3P25206 812 aaKnown RBP16.73■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Nucb2P81117 420 aa16.73■□□□□ 0.27
Pcdha8-201ENSMUST00000194038 Hspa4Q61316 841 aa16.73■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms