RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 Krt85Q9Z2T6 507 aa8.96□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Phldb1Q6PDH0 1371 aaKnown RBP8.96□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Arhgap27A2AB59 869 aa8.96□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Stmn4P63042 189 aa8.96□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Gsdma3Q5Y4Y6 464 aa8.96□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Prpf31Q8CCF0 499 aaKnown RBP8.96□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Kiaa1211Q5PR69 1207 aa8.96□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Tsg101Q61187 391 aa8.96□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Zkscan1Q8BGS3 561 aaKnown RBP8.96□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Ccdc73Q8CDM4 1066 aa8.96□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Triml2E9PW10 424 aa8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Specc1lQ2KN98 1118 aaKnown RBP8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Srcin1Q9QWI6 1250 aa8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Mybbp1aQ7TPV4 1344 aaKnown RBP8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Diaph1O08808 1255 aa8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Mtus1Q5HZI1 1210 aa8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Ehbp1Q69ZW3 1231 aa8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Olfml1Q8BSH2 233 aa8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Gnl2Q99LH1 728 aaKnown RBP8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Dusp27Q148W8 1138 aa8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Tacc1Q6Y685 774 aa8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Suds3Q8BR65 328 aa8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Riok3Q9DBU3 519 aaKnown RBP8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Tacc3Q9JJ11 631 aa8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Zkscan2G3X952 960 aa8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Kif5bQ61768 963 aa8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Gtpbp10Q8K013 366 aa8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Ankrd49Q8VE42 238 aa8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Q9D9S1 216 aa8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Washc2Q6PGL7 1334 aa8.95□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Kif5cP28738 956 aaKnown RBP8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Dact3Q0PHV7 610 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Nop53Q8BK35 484 aaKnown RBP8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Ssx2ipQ8VC66 615 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Kif27Q7M6Z4 1394 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Speer4f2E9Q366 295 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Lrsam1Q80ZI6 727 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Med4Q9CQA5 270 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 NcapgE9PWG6 1004 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Hmox1P14901 289 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Hs1bp3Q3TC93 395 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Map3k9Q3U1V8 1077 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Fam114a1Q9D281 569 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 CftrP26361 1476 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 RalylQ8BTF8 293 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Smarca4Q3TKT4 1613 aaKnown RBP8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Pkd2O35245 966 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 TbcaP48428 108 aaKnown RBP8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Rassf4Q8CB96 322 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Rnf34Q99KR6 376 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Brms1Q99N20 246 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Cyp46a1Q9WVK8 500 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Clip2Q9Z0H8 1047 aa8.94□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 E9QMW4 1145 aa8.93□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Cpsf2O35218 782 aaKnown RBP8.93□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Caprin2Q05A80 1031 aaKnown RBP8.93□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Psmd1Q3TXS7 953 aa8.93□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Cep63Q3UPP8 700 aa8.93□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Abcf1Q6P542 837 aaKnown RBP8.93□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Zscan20B2KFW1 1030 aa8.93□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Kiaa1328Q6NZK5 612 aa8.93□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Ccdc25Q78PG9 208 aa8.93□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Ctnnbl1Q9CWL8 563 aaKnown RBP8.93□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Anapc15-psA0A140T8L6 141 aa8.93□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Stk11ipQ3TAA7 1072 aa8.93□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Sf3b2Q3UJB0 878 aaKnown RBP8.93□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Hspa4Q61316 841 aa8.93□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Eif2aQ8BJW6 581 aaKnown RBP8.93□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Maats1Q8BRC6 783 aa8.93□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Gigyf1Q99MR1 1044 aaKnown RBP8.93□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Cabp4Q8VHC5 271 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Knop1Q9Z2Q2 478 aaKnown RBP8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Abl1P00520 1123 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Paxbp1P58501 919 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Ccdc174Q3U155 467 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Pde1cQ64338 706 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Nsrp1Q5NCR9 542 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Spa17Q62252 149 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Cc2d1bQ8BRN9 848 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Fermt2Q8CIB5 680 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Ercc3P49135 783 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Smarcad1Q04692 1021 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Ccdc93Q7TQK5 629 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 SrrtQ99MR6 875 aaKnown RBP8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Sept14Q9DA97 430 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Znf287Q9EQB9 759 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Gnai1B2RSH2 354 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Pus7B7ZNL8 666 aaKnown RBP8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 FerP70451 823 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Sparcl1P70663 650 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Gnai3Q9DC51 354 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Speer3W4VSP1 261 aa8.92□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Aimp1P31230 310 aaKnown RBP8.91□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Gm1979E9QAN3 267 aa8.91□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Fermt1P59113 677 aa8.91□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Specc1Q5SXY1 1067 aa8.91□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Cc2d1aQ8K1A6 943 aa8.91□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Plcd4Q8K3R3 807 aa8.91□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Rhot2Q8JZN7 620 aa8.91□□□□□ -0.98
Pcdh9-204ENSMUST00000193901 Filip1Q9CS72 1211 aa8.91□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 8.9 ms