RNA–Protein interactions for RNA: ENSMUST00000193170.1

Ccdc71-202, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-202ENSMUST00000193170 Atp7aQ64430 1491 aa11.29□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Dnmt1P13864 1620 aaKnown RBP11.29□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 CrebrfQ8CDG5 640 aaKnown RBP11.29□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Cypt1Q8CH20 168 aa11.29□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Gm6268A2A3U9 297 aa11.29□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Pank1Q8K4K6 548 aa11.29□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 PdiltQ9DAN1 588 aa11.29□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Tmf1B9EKI3 1091 aa11.28□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 March6Q6ZQ89 909 aa11.28□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Gabbr1Q9WV18 960 aa11.28□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Stk25Q9Z2W1 426 aa11.28□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Plch2A2AP18 1501 aa11.28□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Tex14Q7M6U3 1450 aa11.28□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Krt18P05784 423 aa11.28□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Cd109Q8R422 1442 aa11.28□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Gm21680A0A0G2JGR8 267 aa11.27□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Gm1979E9QAN3 267 aa11.27□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Kif11Q6P9P6 1052 aa11.27□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Gm9758Q80ZT2 255 aa11.27□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Ccdc30Q8BVF4 654 aa11.27□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Gtf2a1Q99PM3 378 aa11.27□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Gapvd1Q6PAR5 1458 aa11.27□□□□□ -0.6
Ccdc71-202ENSMUST00000193170 Gm21671G3UY31 267 aa11.27□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Hsp90ab1P11499 724 aaKnown RBP11.27□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Col4a3bpQ9EQG9 624 aa11.27□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 PtprgQ05909 1442 aa11.27□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Sall3Q62255 1320 aa11.27□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Nbr1P97432 988 aa11.27□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Pabpn1Q8CCS6 302 aaKnown RBP11.27□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Zcchc11B2RX14 1644 aaKnown RBP11.26□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Q3TQI7 289 aaKnown RBP11.26□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Mapkbp1Q6NS57 1503 aa11.26□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 IbspQ61711 324 aa11.26□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Rlbp1Q9Z275 317 aa11.26□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Anapc15-psA0A140T8L6 141 aa11.25□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Rad51ap2G3UW63 976 aa11.25□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Pnmal2G3X9N3 661 aa11.25□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Strn4P58404 760 aa11.25□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Lmbrd2Q8C561 694 aa11.25□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Plin1Q8CGN5 517 aa11.25□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Mbd3Q9Z2D8 285 aaKnown RBP11.25□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Plekhh1Q80TI1 1356 aa11.25□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Hoxa2P31245 372 aa11.25□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 AticQ9CWJ9 592 aaKnown RBP11.25□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Galntl5Q9D4M9 431 aa11.25□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 DroshaQ5HZJ0 1373 aaKnown RBP11.24□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Trappc8E9PWG2 1437 aa11.24□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Gm10093D3YYI8 482 aa11.24□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Hdac1O09106 482 aaKnown RBP11.24□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Atxn3Q9CVD2 355 aa11.24□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Sart1Q9Z315 806 aaKnown RBP11.24□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Pdlim2Q8R1G6 349 aa11.24□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Phf14Q9D4H9 881 aa11.24□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Adamts13Q769J6 1426 aa11.23□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Ccdc183A2AJB1 534 aa11.23□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Fam184bQ0KK56 942 aa11.23□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Q8BZJ8 459 aa11.23□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Srcin1Q9QWI6 1250 aa11.23□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Tbc1d12Q6A039 696 aa11.23□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Nrbp1Q99J45 535 aa11.23□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 AknaQ80VW7 1404 aa11.23□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Usp19Q3UJD6 1360 aa11.22□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Ttc41Q692V3 1318 aa11.22□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Map7d2A2AG50 781 aa11.22□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 KarsQ99MN1 595 aaKnown RBP11.22□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Kif7B7ZNG0 1348 aa11.22□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Abcc1O35379 1528 aa11.22□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Vti1aO89116 217 aa11.22□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Pes1Q9EQ61 584 aaKnown RBP11.22□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Mlh3A0A1Y7VMP7 1443 aa11.22□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Neo1P97798 1493 aa11.21□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Rab3gap2Q8BMG7 1366 aa11.21□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Exoc5Q3TPX4 708 aa11.21□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Ppp1r9bQ6R891 817 aaKnown RBP11.21□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Lrrc9Q8CDN9 1456 aa11.21□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Znf335A2A5K6 1337 aa11.21□□□□□ -0.61
Ccdc71-202ENSMUST00000193170 Setd1aE9PYH6 1716 aa11.21□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Gm16486A0A1D5RMD1 1434 aa11.21□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Birc3O08863 600 aa11.2□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Polr3eQ9CZT4 710 aa11.2□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Chd1P40201 1711 aa11.2□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Duxf3A0A0N4SV92 674 aa11.19□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Pcmtd1P59913 357 aa11.19□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Cadps2Q8BYR5 1297 aa11.19□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Ppp1r3fQ9JIG4 799 aa11.19□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Tmcc2Q80W04 706 aa11.19□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Pif1Q80SX8 650 aa11.18□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Cul9Q80TT8 1865 aa11.18□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Nap1l4Q78ZA7 375 aaKnown RBP11.18□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Otud6bQ8K2H2 294 aa11.18□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Golga2Q921M4 999 aa11.18□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Fmn2Q9JL04 1578 aa11.17□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Pcdh10E9PXQ7 1057 aa11.17□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Fbxw10Q5SUS0 1030 aa11.17□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Clstn2Q9ER65 966 aa11.17□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Plagl1Q9JLQ4 704 aa11.17□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Tnpo1Q8BFY9 898 aaKnown RBP11.17□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Cc2d1aQ8K1A6 943 aa11.17□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 OptnQ8K3K8 584 aa11.17□□□□□ -0.62
Ccdc71-202ENSMUST00000193170 Lonrf3Q9D4H7 753 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms