RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Map3k13Q1HKZ5 959 aa20.51■□□□□ 0.87
Ebf3-204ENSMUST00000169486 ImpactO55091 318 aa20.51■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Fchsd2Q3USJ8 740 aa20.51■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Prpf4bQ61136 1007 aaKnown RBP20.51■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Larp1bA0A0A6YXJ7 370 aaKnown RBP20.51■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Cnnm1Q0GA42 951 aa20.51■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Fam43aQ8BUP8 424 aa20.5■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Fsd1Q7TPM6 496 aa20.5■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Def6Q8C2K1 630 aa20.5■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Mcm3P25206 812 aaKnown RBP20.49■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Ppp6r1Q7TSI3 856 aa20.49■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Kank1E9Q238 1360 aa20.49■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Terf2O35144 541 aa20.49■□□□□ 0.87
Ebf3-204ENSMUST00000169486 AqrQ8CFQ3 1481 aaKnown RBP20.49■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Exoc6bA6H5Z3 810 aa20.49■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Cfap58B2RW38 873 aa20.49■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Map4k4P97820 1233 aaKnown RBP20.49■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Cep112Q5PR68 954 aa20.49■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Lamb3Q61087 1168 aa20.49■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Otud6bQ8K2H2 294 aa20.48■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Nat10Q8K224 1024 aaKnown RBP20.48■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Noc3lQ8VI84 807 aaKnown RBP20.48■□□□□ 0.87
Ebf3-204ENSMUST00000169486 ItpripQ3TNL8 555 aa20.48■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Ncbp3Q8BZR9 615 aaKnown RBP20.48■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Plekhm2Q80TQ5 1018 aa20.47■□□□□ 0.87
Ebf3-204ENSMUST00000169486 OptnQ8K3K8 584 aa20.47■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Znf704Q9ERQ3 566 aa20.46■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Sycp1Q62209 993 aa20.46■□□□□ 0.87
Ebf3-204ENSMUST00000169486 SynmQ70IV5 1561 aa20.46■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Dhx8A2A4P0 1244 aaKnown RBP20.46■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Eif3aP23116 1344 aaKnown RBP20.46■□□□□ 0.87
Ebf3-204ENSMUST00000169486 Naip5Q9R016 1403 aa20.45■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Bag4Q8CI61 457 aa20.45■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Zranb3Q6NZP1 1069 aa20.45■□□□□ 0.86
Ebf3-204ENSMUST00000169486 TefQ9JLC6 301 aa20.45■□□□□ 0.86
Ebf3-204ENSMUST00000169486 TchhA0A0B4J1F9 1599 aa20.45■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Hs1bp3Q3TC93 395 aa20.44■□□□□ 0.86
Ebf3-204ENSMUST00000169486 TmpoQ61033 693 aaKnown RBP20.44■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Gnl2Q99LH1 728 aaKnown RBP20.44■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Irgm2A0A140LIF8 407 aa20.44■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Rasa1E9PYG6 1038 aa20.44■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Gjb2Q00977 226 aa20.44■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Slu7Q8BHJ9 585 aa20.44■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Zbtb22Q9Z0G7 638 aa20.44■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Prkar2bP31324 416 aa20.44■□□□□ 0.86
Ebf3-204ENSMUST00000169486 TimelessQ9R1X4 1197 aa20.43■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Hvcn1Q3U2S8 269 aa20.43■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Tbc1d9Q3UYK3 1264 aa20.43■□□□□ 0.86
Ebf3-204ENSMUST00000169486 A2mQ6GQT1 1474 aa20.43■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Phlpp2Q8BXA7 1320 aa20.43■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Asxl1P59598 1514 aa20.43■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Trim30cD3YVI9 513 aa20.43■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Hap1O35668 628 aa20.43■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Gnl3lQ6PGG6 577 aaKnown RBP20.43■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Rhot2Q8JZN7 620 aa20.43■□□□□ 0.86
Ebf3-204ENSMUST00000169486 4931400O07RikQ9D4M5 137 aa20.43■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Chaf1aQ9QWF0 911 aa20.42■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Hdgfl1Q2VPR5 283 aa20.42■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Kiaa0753Q6A000 959 aa20.42■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Stard3nlQ9DCI3 235 aa20.42■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Spag5Q7TME2 1165 aa20.42■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Eva1cP58659 440 aa20.42■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Trim25Q61510 634 aaKnown RBP20.42■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Brf1Q8CFK2 676 aa20.42■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Q3UPC7 1272 aa20.41■□□□□ 0.86
Ebf3-204ENSMUST00000169486 CenpqQ9CPQ5 267 aa20.41■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Wdr33Q8K4P0 1330 aaKnown RBP20.41■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Dnaaf4Q8R368 420 aa20.41■□□□□ 0.86
Ebf3-204ENSMUST00000169486 CenphQ9QYM8 241 aa20.41■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Sytl4Q9R0Q1 673 aa20.41■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Dctn1O08788 1281 aa20.4■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Washc4Q3UMB9 1173 aa20.4■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Secisbp2lQ6A098 1086 aaKnown RBP20.4■□□□□ 0.86
Ebf3-204ENSMUST00000169486 IbtkQ6ZPR6 1352 aaKnown RBP20.4■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Dnajc2P54103 621 aaKnown RBP20.39■□□□□ 0.86
Ebf3-204ENSMUST00000169486 UvssaQ9D479 717 aa20.39■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Gas2l3Q3UWW6 683 aa20.39■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Tango6Q8C3S2 1079 aa20.39■□□□□ 0.86
Ebf3-204ENSMUST00000169486 Cdc45Q9Z1X9 566 aa20.39■□□□□ 0.86
Ebf3-204ENSMUST00000169486 TbcaP48428 108 aaKnown RBP20.39■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Slc13a4Q8BZ82 625 aa20.39■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Igf1rQ60751 1373 aa20.39■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Pms1Q8K119 917 aa20.39■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Abcc5Q9R1X5 1436 aa20.39■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Cavin1O54724 392 aa20.38■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Hoxa7P02830 229 aa20.38■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Sall3Q62255 1320 aa20.38■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Trim55G3X8Y1 545 aa20.38■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Phldb2Q8K1N2 1249 aa20.38■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Ppp1r42Q8R1Z4 357 aa20.38■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Mug1P28665 1476 aa20.38■□□□□ 0.85
Ebf3-204ENSMUST00000169486 SrrtQ99MR6 875 aaKnown RBP20.38■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Abcd1P48410 736 aa20.37■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Larp1Q6ZQ58 1072 aaKnown RBP20.37■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Grin2aP35436 1464 aa20.37■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Sos1Q62245 1319 aa20.37■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Dennd6aQ8BH65 605 aa20.37■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Gse1Q3U3C9 1213 aa20.37■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Tbc1d32Q3URV1 1296 aa20.37■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Q4VA45 678 aa20.37■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms