RNA–Protein interactions for RNA: ENSMUST00000105994.3

Snrnp40-201, Transcript of U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrnp40, Length 1,584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40-201ENSMUST00000105994 Kcnh5Q920E3 988 aa28.2■■■□□ 2.11
Snrnp40-201ENSMUST00000105994 Cacna1sQ02789 1880 aa28.19■■■□□ 2.1
Snrnp40-201ENSMUST00000105994 Ltbp1Q8CG19 1712 aa28.19■■■□□ 2.1
Snrnp40-201ENSMUST00000105994 FancaQ9JL70 1439 aa28.18■■■□□ 2.1
Snrnp40-201ENSMUST00000105994 Card10P58660 1021 aa28.18■■■□□ 2.1
Snrnp40-201ENSMUST00000105994 Slx1bQ8BX32 270 aa28.17■■■□□ 2.1
Snrnp40-201ENSMUST00000105994 Cabp4Q8VHC5 271 aa28.17■■■□□ 2.1
Snrnp40-201ENSMUST00000105994 Robo1O89026 1612 aa28.17■■■□□ 2.1
Snrnp40-201ENSMUST00000105994 TnrQ8BYI9 1358 aa28.16■■■□□ 2.1
Snrnp40-201ENSMUST00000105994 Ccdc129Q14B48 1034 aa28.16■■■□□ 2.1
Snrnp40-201ENSMUST00000105994 Mak16Q8BGS0 296 aaKnown RBP28.16■■■□□ 2.1
Snrnp40-201ENSMUST00000105994 Dnajc10Q9DC23 793 aa28.16■■■□□ 2.1
Snrnp40-201ENSMUST00000105994 Tsen2Q6P7W5 460 aa28.14■■■□□ 2.1
Snrnp40-201ENSMUST00000105994 Cypt1Q8CH20 168 aa28.14■■■□□ 2.1
Snrnp40-201ENSMUST00000105994 Uhrf1bp1lA2RSJ4 1457 aa28.14■■■□□ 2.09
Snrnp40-201ENSMUST00000105994 Amotl2Q8K371 772 aa28.13■■■□□ 2.09
Snrnp40-201ENSMUST00000105994 Fer1l6E0CZ42 1862 aa28.13■■■□□ 2.09
Snrnp40-201ENSMUST00000105994 Fmnl2A2APV2 1086 aa28.11■■■□□ 2.09
Snrnp40-201ENSMUST00000105994 Esx1O88933 382 aa28.11■■■□□ 2.09
Snrnp40-201ENSMUST00000105994 TatQ8QZR1 454 aa28.11■■■□□ 2.09
Snrnp40-201ENSMUST00000105994 Slc12a5Q91V14 1138 aa28.11■■■□□ 2.09
Snrnp40-201ENSMUST00000105994 Rgs17Q9QZB0 210 aa28.11■■■□□ 2.09
Snrnp40-201ENSMUST00000105994 Col22a1E9Q7P1 1613 aa28.1■■■□□ 2.09
Snrnp40-201ENSMUST00000105994 Map4k4P97820 1233 aaKnown RBP28.09■■■□□ 2.09
Snrnp40-201ENSMUST00000105994 Rsph6aQ8CDR2 708 aa28.08■■■□□ 2.09
Snrnp40-201ENSMUST00000105994 U2af1Q9D883 239 aaKnown RBP28.08■■■□□ 2.09
Snrnp40-201ENSMUST00000105994 Zeb2Q9R0G7 1215 aa28.08■■■□□ 2.09
Snrnp40-201ENSMUST00000105994 Kat6bQ8BRB7 1872 aa28.07■■■□□ 2.08
Snrnp40-201ENSMUST00000105994 Spef2Q8C9J3 1734 aa28.06■■■□□ 2.08
Snrnp40-201ENSMUST00000105994 Golga2Q921M4 999 aa28.06■■■□□ 2.08
Snrnp40-201ENSMUST00000105994 Mast2Q60592 1734 aa28.04■■■□□ 2.08
Snrnp40-201ENSMUST00000105994 Znf541Q0GGX2 1363 aa28.04■■■□□ 2.08
Snrnp40-201ENSMUST00000105994 Zfp777B9EKF4 885 aa28.04■■■□□ 2.08
Snrnp40-201ENSMUST00000105994 Usp19Q3UJD6 1360 aa28.04■■■□□ 2.08
Snrnp40-201ENSMUST00000105994 Pm20d1Q8C165 503 aa28.03■■■□□ 2.08
Snrnp40-201ENSMUST00000105994 Tnks1bp1P58871 1720 aa28.03■■■□□ 2.08
Snrnp40-201ENSMUST00000105994 Nol11Q8BJW5 723 aaKnown RBP28.03■■■□□ 2.08
Snrnp40-201ENSMUST00000105994 Ptpn23Q6PB44 1692 aa28.02■■■□□ 2.08
Snrnp40-201ENSMUST00000105994 Eif4a2P10630 407 aa28.02■■■□□ 2.08
Snrnp40-201ENSMUST00000105994 Hoxc9P09633 260 aa28.01■■■□□ 2.07
Snrnp40-201ENSMUST00000105994 Fchsd2Q3USJ8 740 aa28.01■■■□□ 2.07
Snrnp40-201ENSMUST00000105994 Parp14Q2EMV9 1817 aa28.01■■■□□ 2.07
Snrnp40-201ENSMUST00000105994 Akap11E9Q777 1895 aa28■■■□□ 2.07
Snrnp40-201ENSMUST00000105994 RgmbQ7TQ33 436 aa27.99■■■□□ 2.07
Snrnp40-201ENSMUST00000105994 PalmQ9Z0P4 383 aa27.99■■■□□ 2.07
Snrnp40-201ENSMUST00000105994 Nup153E9Q3G8 1462 aaKnown RBP27.98■■■□□ 2.07
Snrnp40-201ENSMUST00000105994 Uspl1Q3ULM6 1089 aa27.97■■■□□ 2.07
Snrnp40-201ENSMUST00000105994 Tmem132eQ6IEE6 982 aa27.97■■■□□ 2.07
Snrnp40-201ENSMUST00000105994 Ly75Q60767 1723 aa27.95■■■□□ 2.06
Snrnp40-201ENSMUST00000105994 Znf710Q3U288 666 aa27.94■■■□□ 2.06
Snrnp40-201ENSMUST00000105994 Ofd1Q80Z25 1017 aa27.94■■■□□ 2.06
Snrnp40-201ENSMUST00000105994 Ncbp3Q8BZR9 615 aaKnown RBP27.94■■■□□ 2.06
Snrnp40-201ENSMUST00000105994 Sugp2Q8CH09 1067 aa27.94■■■□□ 2.06
Snrnp40-201ENSMUST00000105994 FocadA2AKG8 1798 aa27.92■■■□□ 2.06
Snrnp40-201ENSMUST00000105994 CrklP47941 303 aa27.91■■■□□ 2.06
Snrnp40-201ENSMUST00000105994 OptnQ8K3K8 584 aa27.91■■■□□ 2.06
Snrnp40-201ENSMUST00000105994 Mapk8ip3Q9ESN9 1337 aa27.9■■■□□ 2.06
Snrnp40-201ENSMUST00000105994 Slit1Q80TR4 1531 aa27.9■■■□□ 2.06
Snrnp40-201ENSMUST00000105994 Ccne1Q61457 408 aa27.9■■■□□ 2.06
Snrnp40-201ENSMUST00000105994 Ciz1Q8VEH2 845 aa27.89■■■□□ 2.05
Snrnp40-201ENSMUST00000105994 Kdm6aO70546 1401 aa27.88■■■□□ 2.05
Snrnp40-201ENSMUST00000105994 Zfp444Q3TDV8 331 aaKnown RBP27.87■■■□□ 2.05
Snrnp40-201ENSMUST00000105994 Kiaa0319Q5SZV5 1081 aa27.87■■■□□ 2.05
Snrnp40-201ENSMUST00000105994 Pak3Q61036 559 aa27.87■■■□□ 2.05
Snrnp40-201ENSMUST00000105994 Taok3Q8BYC6 898 aa27.87■■■□□ 2.05
Snrnp40-201ENSMUST00000105994 CrbnQ8C7D2 445 aa27.87■■■□□ 2.05
Snrnp40-201ENSMUST00000105994 Ccdc6D3YZP9 469 aa27.86■■■□□ 2.05
Snrnp40-201ENSMUST00000105994 Apaf1O88879 1249 aa27.86■■■□□ 2.05
Snrnp40-201ENSMUST00000105994 Tcerg1Q8CGF7 1100 aaKnown RBP27.86■■■□□ 2.05
Snrnp40-201ENSMUST00000105994 Eya1P97767 591 aa27.86■■■□□ 2.05
Snrnp40-201ENSMUST00000105994 Nwd2Q6P5U7 1742 aa27.85■■■□□ 2.05
Snrnp40-201ENSMUST00000105994 Uhrf1bp1B2KF50 1429 aa27.85■■■□□ 2.05
Snrnp40-201ENSMUST00000105994 MpripP97434 1024 aa27.85■■■□□ 2.05
Snrnp40-201ENSMUST00000105994 Q4VA45 678 aa27.85■■■□□ 2.05
Snrnp40-201ENSMUST00000105994 Plekhd1B2RPU2 505 aa27.83■■■□□ 2.05
Snrnp40-201ENSMUST00000105994 Ralbp1Q62172 648 aa27.83■■■□□ 2.05
Snrnp40-201ENSMUST00000105994 Cavin4A2AMM0 362 aa27.82■■■□□ 2.04
Snrnp40-201ENSMUST00000105994 Ubap1lG3UW59 384 aa27.82■■■□□ 2.04
Snrnp40-201ENSMUST00000105994 Zpr1Q62384 459 aa27.81■■■□□ 2.04
Snrnp40-201ENSMUST00000105994 Vps33bP59016 617 aa27.8■■■□□ 2.04
Snrnp40-201ENSMUST00000105994 Rad21Q61550 635 aaKnown RBP27.8■■■□□ 2.04
Snrnp40-201ENSMUST00000105994 Iqcf3Q9D498 203 aa27.8■■■□□ 2.04
Snrnp40-201ENSMUST00000105994 Speer4f1Q9D5Q6 258 aa27.8■■■□□ 2.04
Snrnp40-201ENSMUST00000105994 4930523C07RikE9Q2T4 99 aa27.79■■■□□ 2.04
Snrnp40-201ENSMUST00000105994 Ankrd23Q812A3 306 aa27.79■■■□□ 2.04
Snrnp40-201ENSMUST00000105994 Stk31Q99MW1 1018 aa27.79■■■□□ 2.04
Snrnp40-201ENSMUST00000105994 Adamtsl1Q8BLI0 1745 aa27.79■■■□□ 2.04
Snrnp40-201ENSMUST00000105994 TnikP83510 1323 aa27.79■■■□□ 2.04
Snrnp40-201ENSMUST00000105994 Ppp6r1Q7TSI3 856 aa27.78■■■□□ 2.04
Snrnp40-201ENSMUST00000105994 TkfcQ8VC30 578 aa27.78■■■□□ 2.04
Snrnp40-201ENSMUST00000105994 Col15a1O35206 1367 aa27.77■■■□□ 2.04
Snrnp40-201ENSMUST00000105994 Rab11fip3Q8CHD8 1047 aa27.77■■■□□ 2.04
Snrnp40-201ENSMUST00000105994 Trpm3Q5F4S9 1721 aa27.76■■■□□ 2.03
Snrnp40-201ENSMUST00000105994 Mst1rQ62190 1378 aa27.75■■■□□ 2.03
Snrnp40-201ENSMUST00000105994 Mcm10Q0VBD2 885 aa27.75■■■□□ 2.03
Snrnp40-201ENSMUST00000105994 Zranb3Q6NZP1 1069 aa27.75■■■□□ 2.03
Snrnp40-201ENSMUST00000105994 Ginm1Q91WR6 327 aa27.75■■■□□ 2.03
Snrnp40-201ENSMUST00000105994 Dusp27Q148W8 1138 aa27.74■■■□□ 2.03
Snrnp40-201ENSMUST00000105994 Ddb1Q3U1J4 1140 aaKnown RBP27.73■■■□□ 2.03
Snrnp40-201ENSMUST00000105994 Simc1E9Q6E9 1354 aa27.72■■■□□ 2.03
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms