RNA–Protein interactions for RNA: ENSMUST00000087050.6

Col4a4-201, Transcript of Collagen alpha-4(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a4, Length 10,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4-201ENSMUST00000087050 Gnl2Q99LH1 728 aaKnown RBP11.67□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Cfdp1O88271 295 aaKnown RBP11.67□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Plekhg5Q66T02 1073 aa11.67□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Mphosph10Q810V0 681 aaKnown RBP11.67□□□□□ -0.54
Col4a4-201ENSMUST00000087050 StambpQ9CQ26 424 aa11.67□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Nap1l2P51860 460 aa11.67□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Shq1Q7TMX5 569 aa11.67□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Krt84Q99M73 603 aa11.67□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Dydc1Q9D9T0 175 aa11.67□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Trim30cD3YVI9 513 aa11.67□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Cnnm3Q32NY4 713 aa11.67□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Gm42641I6L9G2 585 aa11.66□□□□□ -0.54
Col4a4-201ENSMUST00000087050 PsapQ61207 557 aaKnown RBP11.66□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Agtpbp1Q641K1 1218 aa11.66□□□□□ -0.54
Col4a4-201ENSMUST00000087050 AtripQ8BMG1 785 aa11.66□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Rufy2Q8R4C2 606 aa11.66□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Gse1Q3U3C9 1213 aa11.66□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Ppp2r1aQ76MZ3 589 aa11.66□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Kif18aQ91WD7 886 aa11.66□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Arid3cA6PWV5 409 aa11.66□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Sel1lQ9Z2G6 790 aa11.66□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Ccdc141E9Q8Q6 1531 aa11.66□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Fchsd2Q3USJ8 740 aa11.66□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Smc1aQ9CU62 1233 aaKnown RBP11.66□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Cd109Q8R422 1442 aa11.66□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Plekhd1B2RPU2 505 aa11.66□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Stk3Q9JI10 497 aa11.66□□□□□ -0.54
Col4a4-201ENSMUST00000087050 NrkQ9R0G8 1455 aa11.65□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Ankrd1Q9CR42 319 aa11.65□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Tubb4aQ9D6F9 444 aa11.65□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Gm21671G3UY31 267 aa11.65□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Jakmip3Q5DTN8 844 aa11.65□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Wwc1Q5SXA9 1104 aa11.65□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Maats1Q8BRC6 783 aa11.65□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Hspa4Q61316 841 aa11.65□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Smc1bQ920F6 1248 aa11.65□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Cetn2Q9R1K9 172 aa11.65□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Arhgef18Q6P9R4 1021 aa11.65□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Fyb1O35601 819 aa11.65□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Map3k7clP58500 142 aa11.65□□□□□ -0.54
Col4a4-201ENSMUST00000087050 TefQ9JLC6 301 aa11.65□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Gm44503E9PYU5 387 aa11.65□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Tubb4bP68372 445 aaKnown RBP11.65□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Tspyl3Q3UYP3 334 aa11.64□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Rnf187Q8BFX1 236 aa11.64□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Nol12Q8BG17 217 aa11.64□□□□□ -0.55
Col4a4-201ENSMUST00000087050 CarsQ9ER72 831 aaKnown RBP11.64□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Cbx1P83917 185 aaKnown RBP11.64□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Hdgfl1Q2VPR5 283 aa11.64□□□□□ -0.55
Col4a4-201ENSMUST00000087050 ClasrpQ8CFC7 668 aa11.64□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Eif5P59325 429 aaKnown RBP11.64□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Fsd1Q7TPM6 496 aa11.64□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Bms1Q6PGF5 1284 aaKnown RBP11.63□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Paxbp1P58501 919 aa11.63□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Fam107bQ3TGF2 131 aa11.63□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Ehbp1Q69ZW3 1231 aa11.63□□□□□ -0.55
Col4a4-201ENSMUST00000087050 HypkQ9CR41 129 aa11.63□□□□□ -0.55
Col4a4-201ENSMUST00000087050 MvpQ9EQK5 861 aa11.63□□□□□ -0.55
Col4a4-201ENSMUST00000087050 IbtkQ6ZPR6 1352 aaKnown RBP11.63□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Syce3B5KM66 88 aa11.63□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Naip1Q9QWK5 1403 aa11.63□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Gbp8Q2V6D6 525 aa11.63□□□□□ -0.55
Col4a4-201ENSMUST00000087050 ImmtQ8CAQ8 757 aaKnown RBP11.63□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Map2k1P31938 393 aa11.63□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Ncbp1Q3UYV9 790 aaKnown RBP11.63□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Bbof1Q3V079 533 aa11.63□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Hook3Q8BUK6 718 aa11.63□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Ubap1lG3UW59 384 aa11.62□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Naa15Q80UM3 865 aaKnown RBP11.62□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Sept6Q9R1T4 434 aa11.62□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Stx1aO35526 288 aa11.62□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Kcnh8P59111 1102 aa11.62□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Ccdc39Q9D5Y1 937 aa11.62□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Ktn1Q61595 1327 aaKnown RBP11.62□□□□□ -0.55
Col4a4-201ENSMUST00000087050 TbcaP48428 108 aaKnown RBP11.62□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Ccdc112A0AUP1 442 aa11.62□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Wdr63B2RY71 923 aa11.61□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Ncapg2Q6DFV1 1138 aa11.61□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Riok1Q922Q2 567 aa11.61□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Paip2Q9D6V8 124 aa11.61□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Stard3nlQ9DCI3 235 aa11.61□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Jade2Q6ZQF7 829 aa11.61□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Cog6Q8R3I3 657 aa11.61□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Exoc8Q6PGF7 716 aa11.61□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Ctage5Q8R311 779 aa11.61□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Smco2Q9DA21 347 aa11.61□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Gbp1Q01514 589 aa11.61□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Nf2P46662 596 aa11.61□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Rcan3Q9JKK0 239 aa11.61□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Vgll3P85442 326 aa11.61□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Ctr9Q62018 1173 aaKnown RBP11.61□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Cct4P80315 539 aaKnown RBP11.61□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Igbp1bQ9QZ29 343 aa11.6□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Gm1979E9QAN3 267 aa11.6□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Samm50Q8BGH2 469 aa11.6□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Fsd2Q8BZ52 692 aa11.6□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Ccdc73Q8CDM4 1066 aa11.6□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Trim11Q99PQ2 467 aa11.6□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Zscan20B2KFW1 1030 aa11.6□□□□□ -0.55
Col4a4-201ENSMUST00000087050 Shtn1Q8K2Q9 631 aa11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms