RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Mctp1E9PV86 951 aa12.61□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Adcy5P84309 1262 aa12.61□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Tubb4aQ9D6F9 444 aa12.61□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Usp16Q99LG0 825 aa12.61□□□□□ -0.39
Nipbl-201ENSMUST00000052965 SynmQ70IV5 1561 aa12.6□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Trim29Q8R2Q0 587 aa12.6□□□□□ -0.39
Nipbl-201ENSMUST00000052965 NexmifQ5DTT1 1515 aa12.6□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Ubap1lG3UW59 384 aa12.6□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Mink1Q9JM52 1308 aa12.6□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Rad54l2Q99NG0 1466 aa12.6□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Tbc1d32Q3URV1 1296 aa12.6□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Hspa4Q61316 841 aa12.6□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Ddx19aQ61655 478 aaKnown RBP12.6□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Cep57l1Q8VDS7 400 aa12.6□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Samm50Q8BGH2 469 aa12.6□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Rassf4Q8CB96 322 aa12.6□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Rbm25B2RY56 838 aaKnown RBP12.6□□□□□ -0.39
Nipbl-201ENSMUST00000052965 L3mbtl2P59178 703 aa12.6□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Iqca1Q9CUL5 857 aa12.6□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Fam114a1Q9D281 569 aa12.6□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Trim25Q61510 634 aaKnown RBP12.59□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Ccdc191J3QQ27 883 aa12.59□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Abcf1Q6P542 837 aaKnown RBP12.59□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Cep135Q6P5D4 1140 aa12.59□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Jph4Q80WT0 628 aa12.59□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Il16O54824 1322 aa12.59□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Tubb4bP68372 445 aaKnown RBP12.59□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Bbof1Q3V079 533 aa12.59□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Wwc1Q5SXA9 1104 aa12.59□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Gnl2Q99LH1 728 aaKnown RBP12.59□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Lamc3Q9R0B6 1581 aa12.59□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Lamb3Q61087 1168 aa12.58□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Grpel1Q99LP6 217 aa12.58□□□□□ -0.39
Nipbl-201ENSMUST00000052965 Gm18336A0A140LIU8 765 aa12.58□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Cavin4A2AMM0 362 aa12.58□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Rsph10bE9PYQ0 876 aa12.58□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Ppp6r1Q7TSI3 856 aa12.58□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Calcoco1Q8CGU1 691 aa12.58□□□□□ -0.4
Nipbl-201ENSMUST00000052965 ClasrpQ8CFC7 668 aa12.58□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Stk38Q91VJ4 465 aa12.58□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Arhgap31A6X8Z5 1425 aa12.57□□□□□ -0.4
Nipbl-201ENSMUST00000052965 CarsQ9ER72 831 aaKnown RBP12.57□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Rfx7F8VPJ6 1459 aa12.57□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Ppp2r1aQ76MZ3 589 aa12.57□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Ncoa1P70365 1447 aa12.57□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Sv2bQ8BG39 683 aa12.57□□□□□ -0.4
Nipbl-201ENSMUST00000052965 DonsonQ9QXP4 560 aa12.57□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Mnat1P51949 309 aa12.57□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Mex3cQ05A36 652 aaKnown RBP12.56□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Chmp7Q8R1T1 451 aa12.56□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Ccdc73Q8CDM4 1066 aa12.56□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Bag4Q8CI61 457 aa12.56□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Noc3lQ8VI84 807 aaKnown RBP12.56□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Elp1Q7TT37 1333 aaKnown RBP12.56□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Phlpp2Q8BXA7 1320 aa12.55□□□□□ -0.4
Nipbl-201ENSMUST00000052965 EprsQ8CGC7 1512 aaKnown RBP12.55□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Snw1Q9CSN1 536 aaKnown RBP12.55□□□□□ -0.4
Nipbl-201ENSMUST00000052965 MvpQ9EQK5 861 aa12.55□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Serpinb6bO08804 377 aa12.55□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Cc2d1aQ8K1A6 943 aa12.55□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Smarcc1P97496 1104 aa12.55□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Eif4g1Q6NZJ6 1600 aaKnown RBP12.55□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Stim1P70302 685 aa12.55□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Cfap157Q0VFX2 523 aa12.55□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Zkscan7E9PVW1 718 aa12.54□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Irx4Q9QY61 515 aa12.54□□□□□ -0.4
Nipbl-201ENSMUST00000052965 CenphQ9QYM8 241 aa12.54□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Urb2E9Q7L1 1524 aaKnown RBP12.54□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Ube2hP62257 183 aa12.54□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Hdgfl1Q2VPR5 283 aa12.54□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Ccdc43Q9CR29 222 aaKnown RBP12.54□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Ccdc96Q9CR92 584 aa12.54□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Abcd1P48410 736 aa12.54□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Nom1Q3UFM5 854 aaKnown RBP12.54□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Supt6hQ62383 1726 aaKnown RBP12.54□□□□□ -0.4
Nipbl-201ENSMUST00000052965 PogzQ8BZH4 1409 aaKnown RBP12.54□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Slx4Q6P1D7 1565 aa12.54□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Ppip5k2Q6ZQB6 1129 aa12.53□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Gm21190A0A0G2JGJ6 266 aa12.53□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Zfp251Q6PCX8 632 aa12.53□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Ddx46Q569Z5 1032 aaKnown RBP12.53□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Ankrd1Q9CR42 319 aa12.53□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Puf60Q3UEB3 564 aaKnown RBP12.53□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Map3k7clP58500 142 aa12.53□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Cfap45Q9D9U9 551 aa12.53□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Erich3F6QRE9 1637 aa12.53□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Igbp1bQ9QZ29 343 aa12.52□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Naip2Q9QUK4 1447 aa12.52□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Stx1aO35526 288 aa12.52□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Pafah1b1P63005 410 aaKnown RBP12.52□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Q7TT23 1179 aa12.52□□□□□ -0.4
Nipbl-201ENSMUST00000052965 Gm10471E9Q1C7 252 aa12.52□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Pde4cQ3UEI1 686 aa12.52□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Wdr63B2RY71 923 aa12.52□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Als2cr12Q8BVM7 383 aa12.52□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Tfip11Q9ERA6 838 aaKnown RBP12.52□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Ankrd26Q811D2 1581 aa12.51□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Gnai2P08752 355 aaKnown RBP12.51□□□□□ -0.41
Nipbl-201ENSMUST00000052965 FosbP13346 338 aa12.51□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Mis12Q9CY25 206 aa12.51□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 41.4 ms