RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Fmn2Q9JL04 1578 aa12.36□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Ppip5k2Q6ZQB6 1129 aa12.36□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Mad1l1Q9WTX8 717 aaKnown RBP12.36□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Atxn3Q9CVD2 355 aa12.35□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Gm21698A0A087WQP8 267 aa12.35□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Gm21671G3UY31 267 aa12.35□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Tpm2P58774 284 aa12.35□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Gpatch11Q3UFS4 262 aa12.35□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Phf14Q9D4H9 881 aa12.35□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Phlpp2Q8BXA7 1320 aa12.35□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Abcc1O35379 1528 aa12.34□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Abcc6Q9R1S7 1498 aa12.34□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Cct4P80315 539 aaKnown RBP12.34□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Pdcl3Q8BVF2 240 aa12.34□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Mum1Q6DID5 682 aa12.33□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Ptpdc1Q6NZK8 747 aa12.33□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Smg7Q5RJH6 1138 aaKnown RBP12.33□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 ZgpatQ8VDM1 511 aa12.33□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 UvssaQ9D479 717 aa12.33□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Chmp4cQ9D7F7 232 aa12.33□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Talpid3E9PV87 1520 aa12.33□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Rrbp1Q99PL5 1605 aaKnown RBP12.33□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Usp48Q3V0C5 1052 aa12.33□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Btbd11Q6GQW0 1109 aa12.33□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Pola1P33609 1465 aa12.33□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.32□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Gabpb2P81069 414 aa12.32□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Flad1Q8R123 492 aa12.32□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Evi5lH3BKQ3 813 aa12.32□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Tpm4Q6IRU2 248 aa12.32□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Odf2lQ9D478 642 aa12.32□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Ipo7Q9EPL8 1038 aaKnown RBP12.32□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Q3UPC7 1272 aa12.31□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Top1mtQ8R4U6 593 aa12.31□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Mast1Q9R1L5 1570 aa12.31□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Adamts12Q811B3 1600 aa12.31□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Ankrd44B2RXR6 993 aa12.31□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Me1P06801 572 aa12.31□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Ssh1Q76I79 1042 aa12.31□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Polr3gQ6NXY9 223 aa12.31□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Ppp1r9bQ6R891 817 aaKnown RBP12.31□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Arhgef11Q68FM7 1552 aa12.31□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Cdk13Q69ZA1 1511 aaKnown RBP12.31□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Jakmip1Q8BVL9 626 aa12.31□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Anapc15-psA0A140T8L6 141 aa12.3□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Dhx8A2A4P0 1244 aaKnown RBP12.3□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Fez1Q8K0X8 392 aa12.3□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Plcd4Q8K3R3 807 aa12.3□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Dhx16G3X8X0 1044 aaKnown RBP12.29□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 PalldQ9ET54 1408 aa12.29□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Abcc2Q8VI47 1543 aa12.29□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Prkar2bP31324 416 aa12.29□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Rusc2Q80U22 1514 aa12.29□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Eif3bQ8JZQ9 803 aaKnown RBP12.29□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Exoc6bA6H5Z3 810 aa12.29□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Trim29Q8R2Q0 587 aa12.29□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Skint5A7XUY5 1461 aa12.28□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Prl7d1P04769 244 aa12.28□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Cavin2Q63918 418 aaKnown RBP12.28□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Smc2Q8CG48 1191 aaKnown RBP12.28□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Tfip11Q9ERA6 838 aaKnown RBP12.28□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Gm10563F6WIE4 79 aa12.28□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Taf3Q5HZG4 932 aa12.28□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 BcanQ61361 883 aa12.28□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Cep57l1Q8VDS7 400 aa12.28□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Krt82Q99M74 516 aa12.27□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Pik3r4Q8VD65 1358 aa12.27□□□□□ -0.44
Ccdc40-201ENSMUST00000035935 Gsdma2Q32M21 443 aa12.27□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Ppp6r1Q7TSI3 856 aa12.27□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Ncbp3Q8BZR9 615 aaKnown RBP12.27□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Hnrnpul1Q8VDM6 859 aaKnown RBP12.27□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Noc3lQ8VI84 807 aaKnown RBP12.27□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Med4Q9CQA5 270 aa12.27□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Gm156Q58A37 223 aa12.27□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Nol12Q8BG17 217 aa12.27□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Nop14Q8R3N1 860 aaKnown RBP12.27□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Nphp4P59240 1425 aa12.27□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Gm21663A0A0G2JE01 267 aa12.26□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Gm7361D3Z6R1 267 aa12.26□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Fam184aE9PW83 1143 aa12.26□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 5031410I06RikE9Q4E0 267 aa12.26□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Gm1979E9QAN3 267 aa12.26□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Gm5862K7N5V5 267 aa12.26□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Gm10220K7N660 267 aa12.26□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Tbc1d32Q3URV1 1296 aa12.26□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Ppp1r42Q8R1Z4 357 aa12.26□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Stk11ipQ3TAA7 1072 aa12.26□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Rnf214Q8BFU3 668 aaKnown RBP12.26□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Speer4bQ9D9F7 267 aa12.26□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Kif20aP97329 887 aa12.26□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Ddx19aQ61655 478 aaKnown RBP12.26□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Kri1Q8VDQ9 704 aaKnown RBP12.26□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Erc1Q99MI1 1120 aa12.26□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 BccipQ9CWI3 316 aa12.26□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 SphkapQ6NSW3 1687 aa12.25□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Ccp110Q7TSH4 1004 aa12.25□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Eva1cP58659 440 aa12.25□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Krt85Q9Z2T6 507 aa12.25□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Wdr63B2RY71 923 aa12.24□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Liat1Q810M6 228 aa12.24□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 55.3 ms