RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Ttc21aQ8C0S4 1314 aa12.17□□□□□ -0.46
Copb1-201ENSMUST00000033012 Atp7aQ64430 1491 aa12.16□□□□□ -0.46
Copb1-201ENSMUST00000033012 Gdpd2Q9ESM6 539 aa12.16□□□□□ -0.46
Copb1-201ENSMUST00000033012 Gprasp1Q5U4C1 1347 aa12.16□□□□□ -0.46
Copb1-201ENSMUST00000033012 Tpm3P21107 285 aaKnown RBP12.16□□□□□ -0.46
Copb1-201ENSMUST00000033012 Lrriq3Q14DL3 633 aa12.16□□□□□ -0.46
Copb1-201ENSMUST00000033012 Adgrl3Q80TS3 1537 aa12.16□□□□□ -0.46
Copb1-201ENSMUST00000033012 Prr29B1ARI9 187 aa12.16□□□□□ -0.46
Copb1-201ENSMUST00000033012 Rangap1P46061 589 aaKnown RBP12.16□□□□□ -0.46
Copb1-201ENSMUST00000033012 Gpatch11Q3UFS4 262 aa12.16□□□□□ -0.46
Copb1-201ENSMUST00000033012 Maco1Q7TQE6 664 aaKnown RBP12.16□□□□□ -0.46
Copb1-201ENSMUST00000033012 Srcin1Q9QWI6 1250 aa12.16□□□□□ -0.46
Copb1-201ENSMUST00000033012 Gm11983V9GXS8 105 aa12.16□□□□□ -0.46
Copb1-201ENSMUST00000033012 Adamts12Q811B3 1600 aa12.16□□□□□ -0.46
Copb1-201ENSMUST00000033012 Zfp397Q7TNK4 527 aa12.15□□□□□ -0.46
Copb1-201ENSMUST00000033012 Gm45015A0A140LII9 184 aa12.15□□□□□ -0.46
Copb1-201ENSMUST00000033012 Gm18336A0A140LIU8 765 aa12.15□□□□□ -0.46
Copb1-201ENSMUST00000033012 Ms4a1P19437 291 aa12.15□□□□□ -0.46
Copb1-201ENSMUST00000033012 Ccdc34Q3UI66 367 aa12.15□□□□□ -0.46
Copb1-201ENSMUST00000033012 Ppip5k2Q6ZQB6 1129 aa12.15□□□□□ -0.46
Copb1-201ENSMUST00000033012 Safb2Q80YR5 991 aaKnown RBP12.15□□□□□ -0.46
Copb1-201ENSMUST00000033012 Card6E9PWH2 1175 aa12.14□□□□□ -0.47
Copb1-201ENSMUST00000033012 CenpqQ9CPQ5 267 aa12.14□□□□□ -0.47
Copb1-201ENSMUST00000033012 CenppQ9CZ92 286 aa12.14□□□□□ -0.47
Copb1-201ENSMUST00000033012 Elp1Q7TT37 1333 aaKnown RBP12.14□□□□□ -0.47
Copb1-201ENSMUST00000033012 Vps33aQ9D2N9 598 aa12.14□□□□□ -0.47
Copb1-201ENSMUST00000033012 Naip7Q9JIB3 1402 aa12.14□□□□□ -0.47
Copb1-201ENSMUST00000033012 Samd1D3YXK1 519 aa12.14□□□□□ -0.47
Copb1-201ENSMUST00000033012 Arglu1Q3UL36 271 aaKnown RBP12.14□□□□□ -0.47
Copb1-201ENSMUST00000033012 Atp2b2Q9R0K7 1198 aa12.13□□□□□ -0.47
Copb1-201ENSMUST00000033012 Dip2aQ8BWT5 1523 aa12.13□□□□□ -0.47
Copb1-201ENSMUST00000033012 WizO88286 1684 aaKnown RBP12.13□□□□□ -0.47
Copb1-201ENSMUST00000033012 Cc2d2bA0A286YDU8 1405 aa12.13□□□□□ -0.47
Copb1-201ENSMUST00000033012 Stk11ipQ3TAA7 1072 aa12.13□□□□□ -0.47
Copb1-201ENSMUST00000033012 Tulp4Q9JIL5 1547 aa12.12□□□□□ -0.47
Copb1-201ENSMUST00000033012 RdxP26043 583 aaKnown RBP12.12□□□□□ -0.47
Copb1-201ENSMUST00000033012 Zfp51Q3U4L8 781 aa12.12□□□□□ -0.47
Copb1-201ENSMUST00000033012 Fkbp15Q6P9Q6 1216 aaKnown RBP12.12□□□□□ -0.47
Copb1-201ENSMUST00000033012 Cd109Q8R422 1442 aa12.12□□□□□ -0.47
Copb1-201ENSMUST00000033012 IbtkQ6ZPR6 1352 aaKnown RBP12.12□□□□□ -0.47
Copb1-201ENSMUST00000033012 Ccdc146E9Q9F7 977 aa12.12□□□□□ -0.47
Copb1-201ENSMUST00000033012 Tpd52l1O54818 204 aa12.12□□□□□ -0.47
Copb1-201ENSMUST00000033012 MlecQ6ZQI3 291 aaKnown RBP12.12□□□□□ -0.47
Copb1-201ENSMUST00000033012 Mmel1Q9JLI3 765 aa12.12□□□□□ -0.47
Copb1-201ENSMUST00000033012 Adgrl2Q8JZZ7 1487 aa12.12□□□□□ -0.47
Copb1-201ENSMUST00000033012 AatkQ80YE4 1365 aa12.11□□□□□ -0.47
Copb1-201ENSMUST00000033012 Klhl34A2AI76 644 aa12.11□□□□□ -0.47
Copb1-201ENSMUST00000033012 Brd2Q7JJ13 798 aaKnown RBP12.11□□□□□ -0.47
Copb1-201ENSMUST00000033012 Abca9Q8K449 1623 aa12.11□□□□□ -0.47
Copb1-201ENSMUST00000033012 Zscan29E9Q5B4 869 aa12.11□□□□□ -0.47
Copb1-201ENSMUST00000033012 Rab3gap1Q80UJ7 981 aa12.11□□□□□ -0.47
Copb1-201ENSMUST00000033012 Plin1Q8CGN5 517 aa12.11□□□□□ -0.47
Copb1-201ENSMUST00000033012 Ppp6r3Q922D4 844 aa12.11□□□□□ -0.47
Copb1-201ENSMUST00000033012 Creld2Q9CYA0 350 aa12.11□□□□□ -0.47
Copb1-201ENSMUST00000033012 GsdmaQ9EST1 446 aa12.11□□□□□ -0.47
Copb1-201ENSMUST00000033012 Npm1Q61937 292 aaKnown RBP12.1□□□□□ -0.47
Copb1-201ENSMUST00000033012 Cdk4P30285 303 aa12.1□□□□□ -0.47
Copb1-201ENSMUST00000033012 OptnQ8K3K8 584 aa12.1□□□□□ -0.47
Copb1-201ENSMUST00000033012 Zeb2Q9R0G7 1215 aa12.1□□□□□ -0.47
Copb1-201ENSMUST00000033012 Casc1Q6TDU8 730 aa12.09□□□□□ -0.47
Copb1-201ENSMUST00000033012 Fam53cQ8BXQ8 393 aa12.09□□□□□ -0.47
Copb1-201ENSMUST00000033012 Spata32Q8C5V0 334 aa12.09□□□□□ -0.47
Copb1-201ENSMUST00000033012 Nucb1Q02819 459 aaKnown RBP12.09□□□□□ -0.47
Copb1-201ENSMUST00000033012 Mrps27Q8BK72 415 aaKnown RBP12.09□□□□□ -0.47
Copb1-201ENSMUST00000033012 Ifi35Q9D8C4 286 aa12.09□□□□□ -0.47
Copb1-201ENSMUST00000033012 MvpQ9EQK5 861 aa12.09□□□□□ -0.47
Copb1-201ENSMUST00000033012 Cspp1B2RX88 1205 aa12.09□□□□□ -0.47
Copb1-201ENSMUST00000033012 Nlrp3Q8R4B8 1033 aa12.09□□□□□ -0.47
Copb1-201ENSMUST00000033012 Ttc37F8VPK0 1563 aa12.08□□□□□ -0.47
Copb1-201ENSMUST00000033012 Mlh3A0A1Y7VMP7 1443 aa12.08□□□□□ -0.48
Copb1-201ENSMUST00000033012 Vwa3bJ9JI28 736 aa12.08□□□□□ -0.48
Copb1-201ENSMUST00000033012 Cgnl1Q6AW69 1298 aa12.08□□□□□ -0.48
Copb1-201ENSMUST00000033012 Clstn2Q9ER65 966 aa12.08□□□□□ -0.48
Copb1-201ENSMUST00000033012 Adgrl1Q80TR1 1466 aa12.08□□□□□ -0.48
Copb1-201ENSMUST00000033012 CastP51125 788 aa12.08□□□□□ -0.48
Copb1-201ENSMUST00000033012 CebpzP53569 1052 aaKnown RBP12.08□□□□□ -0.48
Copb1-201ENSMUST00000033012 CarsQ9ER72 831 aaKnown RBP12.08□□□□□ -0.48
Copb1-201ENSMUST00000033012 Hfm1D3Z4R1 1434 aa12.08□□□□□ -0.48
Copb1-201ENSMUST00000033012 Magi3Q9EQJ9 1476 aa12.08□□□□□ -0.48
Copb1-201ENSMUST00000033012 Lcmt1A0A0U1RNF2 332 aa12.08□□□□□ -0.48
Copb1-201ENSMUST00000033012 Ccdc162pQ0VG85 912 aa12.08□□□□□ -0.48
Copb1-201ENSMUST00000033012 Iqca1Q9CUL5 857 aa12.07□□□□□ -0.48
Copb1-201ENSMUST00000033012 P2rx7Q9Z1M0 595 aa12.07□□□□□ -0.48
Copb1-201ENSMUST00000033012 Caskin1Q6P9K8 1431 aa12.07□□□□□ -0.48
Copb1-201ENSMUST00000033012 Serpinb6bO08804 377 aa12.07□□□□□ -0.48
Copb1-201ENSMUST00000033012 Mapkbp1Q6NS57 1503 aa12.07□□□□□ -0.48
Copb1-201ENSMUST00000033012 Ssh2Q5SW75 1423 aa12.07□□□□□ -0.48
Copb1-201ENSMUST00000033012 Ccdc171E9Q1U1 1324 aa12.07□□□□□ -0.48
Copb1-201ENSMUST00000033012 Rnf123Q5XPI3 1314 aa12.07□□□□□ -0.48
Copb1-201ENSMUST00000033012 Kmt5bQ3U8K7 883 aa12.06□□□□□ -0.48
Copb1-201ENSMUST00000033012 Fam177a1Q8BR63 207 aa12.06□□□□□ -0.48
Copb1-201ENSMUST00000033012 Znf330Q922H9 316 aa12.06□□□□□ -0.48
Copb1-201ENSMUST00000033012 Syt10Q9R0N4 523 aa12.06□□□□□ -0.48
Copb1-201ENSMUST00000033012 Hecw2Q6I6G8 1578 aa12.06□□□□□ -0.48
Copb1-201ENSMUST00000033012 NexnQ7TPW1 607 aa12.06□□□□□ -0.48
Copb1-201ENSMUST00000033012 Nop14Q8R3N1 860 aaKnown RBP12.06□□□□□ -0.48
Copb1-201ENSMUST00000033012 Abca8bQ8K440 1620 aa12.06□□□□□ -0.48
Copb1-201ENSMUST00000033012 WrnO09053 1401 aa12.06□□□□□ -0.48
Copb1-201ENSMUST00000033012 Cfap73J3QPZ5 306 aa12.05□□□□□ -0.48
Copb1-201ENSMUST00000033012 Cfap157Q0VFX2 523 aa12.05□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms