RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Pdlim2Q8R1G6 349 aa11.11□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Synpo2Q91YE8 1087 aaKnown RBP11.11□□□□□ -0.63
Ctc1-201ENSMUST00000021278 RereQ80TZ9 1558 aa11.11□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Ica1lQ3TY65 431 aa11.11□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Nol10Q5RJG1 687 aaKnown RBP11.11□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Kif2aP28740 705 aa11.11□□□□□ -0.63
Ctc1-201ENSMUST00000021278 CebpzP53569 1052 aaKnown RBP11.11□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Irx4Q9QY61 515 aa11.11□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Dnai2A2AC93 623 aa11.1□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Adcy5P84309 1262 aa11.1□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Txndc2Q6P902 515 aa11.1□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Spag5Q7TME2 1165 aa11.1□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Atp1b4Q99ME6 356 aa11.1□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Bag4Q8CI61 457 aa11.1□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Otud6bQ8K2H2 294 aa11.1□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Ccdc83Q9D4V3 305 aa11.1□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Plekhh2Q8C115 1491 aa11.1□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Kidins220E9Q9B7 1793 aa11.1□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Gli2Q0VGT2 1544 aa11.1□□□□□ -0.63
Ctc1-201ENSMUST00000021278 A0A0U1RNP2 1173 aa11.1□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Rai14Q9EP71 979 aaKnown RBP11.1□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Tfip11Q9ERA6 838 aaKnown RBP11.1□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Tmx4Q8C0L0 335 aa11.09□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Cfap74Q3UY96 1578 aa11.09□□□□□ -0.63
Ctc1-201ENSMUST00000021278 MecomP14404 1042 aa11.09□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Tmx3Q8BXZ1 456 aa11.09□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Letm1Q9Z2I0 738 aa11.09□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Utp14aQ640M1 767 aaKnown RBP11.09□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Gm45140A0A0N4SUM8 220 aa11.08□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Nol7Q9D7Z3 254 aaKnown RBP11.08□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Naip6Q9JIB6 1403 aa11.08□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Hsp90b1P08113 802 aaKnown RBP11.08□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Tpm1P58771 284 aa11.08□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Nxf2Q4ZGD8 691 aa11.08□□□□□ -0.64
Ctc1-201ENSMUST00000021278 4930407I10RikD3Z5T8 1512 aa11.08□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Babam1Q3UI43 333 aa11.08□□□□□ -0.64
Ctc1-201ENSMUST00000021278 MvpQ9EQK5 861 aa11.08□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Supt6hQ62383 1726 aaKnown RBP11.07□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Zkscan5Q9Z1D8 819 aa11.07□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Rasa1E9PYG6 1038 aa11.07□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Zkscan1Q8BGS3 561 aaKnown RBP11.06□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Zpr1Q62384 459 aa11.06□□□□□ -0.64
Ctc1-201ENSMUST00000021278 TxlnbQ8VBT1 685 aa11.06□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Tmco3Q8BH01 678 aa11.06□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Syt10Q9R0N4 523 aa11.06□□□□□ -0.64
Ctc1-201ENSMUST00000021278 ImpactO55091 318 aa11.06□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Tpm3P21107 285 aaKnown RBP11.06□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Atp6v1aP50516 617 aaKnown RBP11.06□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Kdm5cP41230 1554 aa11.05□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Abcc3B2RX12 1523 aa11.05□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Dhx8A2A4P0 1244 aaKnown RBP11.05□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Zscan25B2RX31 543 aa11.05□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Lig3P97386 1015 aa11.05□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Ccdc102aQ3TMW1 549 aa11.05□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Smc2Q8CG48 1191 aaKnown RBP11.05□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Sytl4Q9R0Q1 673 aa11.05□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Adamtsl3G3UXC7 1706 aa11.05□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Znf518aB2RRF6 1478 aaKnown RBP11.05□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Mcm6P97311 821 aa11.05□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Zfp397Q7TNK4 527 aa11.05□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Stk24Q99KH8 431 aa11.05□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Paxbp1P58501 919 aa11.05□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Mphosph10Q810V0 681 aaKnown RBP11.05□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Cc2d1aQ8K1A6 943 aa11.05□□□□□ -0.64
Ctc1-201ENSMUST00000021278 SphkapQ6NSW3 1687 aa11.04□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Ttll12Q3UDE2 639 aa11.04□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Tpm4Q6IRU2 248 aa11.04□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Stk3Q9JI10 497 aa11.04□□□□□ -0.64
Ctc1-201ENSMUST00000021278 DroshaQ5HZJ0 1373 aaKnown RBP11.04□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Trim30cD3YVI9 513 aa11.04□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Hspa1lP16627 641 aa11.04□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Gtf2f1Q3THK3 508 aaKnown RBP11.04□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Cog6Q8R3I3 657 aa11.04□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Nop14Q8R3N1 860 aaKnown RBP11.04□□□□□ -0.64
Ctc1-201ENSMUST00000021278 DonsonQ9QXP4 560 aa11.04□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Abcc5Q9R1X5 1436 aa11.04□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Pde4cQ3UEI1 686 aa11.04□□□□□ -0.64
Ctc1-201ENSMUST00000021278 St18Q80TY4 1045 aa11.04□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Ccdc97Q9DBT3 340 aa11.04□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Golga5Q9QYE6 729 aa11.04□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Nucb2P81117 420 aa11.03□□□□□ -0.64
Ctc1-201ENSMUST00000021278 AatfQ9JKX4 526 aaKnown RBP11.03□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Gm32742A0A1B0GT42 1604 aa11.03□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Phactr2B1AVP0 632 aa11.03□□□□□ -0.64
Ctc1-201ENSMUST00000021278 OptnQ8K3K8 584 aa11.03□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Antxr1Q9CZ52 562 aa11.03□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Mmel1Q9JLI3 765 aa11.03□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Nek4Q9Z1J2 792 aa11.03□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Card6E9PWH2 1175 aa11.03□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Map4P27546 1125 aaKnown RBP11.03□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Ercc3P49135 783 aa11.03□□□□□ -0.64
Ctc1-201ENSMUST00000021278 4930519G04RikQ9CPT7 205 aa11.03□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Mcm3P25206 812 aaKnown RBP11.02□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Senp3Q9EP97 568 aaKnown RBP11.02□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Sh3bgrQ9WUZ7 214 aa11.02□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Cul9Q80TT8 1865 aa11.02□□□□□ -0.64
Ctc1-201ENSMUST00000021278 Prpf38aQ4FK66 312 aaKnown RBP11.02□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Myom2Q14BI5 1463 aa11.02□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Peg3Q3URU2 1571 aa11.02□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Mnat1P51949 309 aa11.02□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms