RNA–Protein interactions for RNA: ENSMUST00000020034.5

Echdc1-201, Transcript of Ethylmalonyl-CoA decarboxylase, mousemouse

TSL 1 (best) BASIC

Gene Echdc1, Length 3,856 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc1-201ENSMUST00000020034 Pdia4P08003 638 aaKnown RBP12.66□□□□□ -0.38
Echdc1-201ENSMUST00000020034 Aifm3Q3TY86 605 aa12.66□□□□□ -0.38
Echdc1-201ENSMUST00000020034 Dnmt1P13864 1620 aaKnown RBP12.66□□□□□ -0.38
Echdc1-201ENSMUST00000020034 Cpa2Q504N0 417 aa12.65□□□□□ -0.38
Echdc1-201ENSMUST00000020034 Fam13aQ8BGI4 693 aa12.65□□□□□ -0.38
Echdc1-201ENSMUST00000020034 Kif1bQ60575 1816 aaKnown RBP12.65□□□□□ -0.38
Echdc1-201ENSMUST00000020034 PaskQ8CEE6 1383 aa12.65□□□□□ -0.38
Echdc1-201ENSMUST00000020034 Slc4a10Q5DTL9 1118 aa12.65□□□□□ -0.38
Echdc1-201ENSMUST00000020034 DmtnQ9WV69 405 aa12.65□□□□□ -0.38
Echdc1-201ENSMUST00000020034 Nsd3Q6P2L6 1439 aa12.65□□□□□ -0.38
Echdc1-201ENSMUST00000020034 Lrriq1Q0P5X1 1673 aa12.65□□□□□ -0.38
Echdc1-201ENSMUST00000020034 Safb2Q80YR5 991 aaKnown RBP12.65□□□□□ -0.38
Echdc1-201ENSMUST00000020034 Kcnn1Q9EQR3 537 aa12.65□□□□□ -0.38
Echdc1-201ENSMUST00000020034 Bcar3Q9QZK2 820 aa12.65□□□□□ -0.38
Echdc1-201ENSMUST00000020034 Lrrc7Q80TE7 1490 aa12.65□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Pdia3P27773 505 aaKnown RBP12.64□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Atp6v1dP57746 247 aa12.64□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Kdm5aQ3UXZ9 1690 aa12.64□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Kif4P33174 1231 aa12.64□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Gm32742A0A1B0GT42 1604 aa12.64□□□□□ -0.39
Echdc1-201ENSMUST00000020034 OvosQ3UU35 1456 aa12.64□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Brpf1B2RRD7 1212 aa12.64□□□□□ -0.39
Echdc1-201ENSMUST00000020034 TmpoQ61033 693 aaKnown RBP12.64□□□□□ -0.39
Echdc1-201ENSMUST00000020034 CenppQ9CZ92 286 aa12.64□□□□□ -0.39
Echdc1-201ENSMUST00000020034 NexnQ7TPW1 607 aa12.63□□□□□ -0.39
Echdc1-201ENSMUST00000020034 CgnP59242 1191 aa12.63□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Srgap3Q812A2 1099 aa12.63□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Anapc15-psA0A140T8L6 141 aa12.63□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Tmx3Q8BXZ1 456 aa12.63□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Zkscan2G3X952 960 aa12.63□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Babam1Q3UI43 333 aa12.63□□□□□ -0.39
Echdc1-201ENSMUST00000020034 4931400O07RikQ9D4M5 137 aa12.63□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Gpatch11Q3UFS4 262 aa12.62□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Jakmip1Q8BVL9 626 aa12.62□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Nphp1Q9QY53 687 aa12.62□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Rbm27Q5SFM8 1060 aaKnown RBP12.62□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Kdm4cQ8VCD7 1054 aa12.62□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Nucb1Q02819 459 aaKnown RBP12.62□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Cwc27Q3TKY6 469 aa12.62□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Fez1Q8K0X8 392 aa12.62□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Gdpd2Q9ESM6 539 aa12.61□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Skint5A7XUY5 1461 aa12.61□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.61□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Gnai2P08752 355 aaKnown RBP12.61□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Tpm2P58774 284 aa12.61□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Tshz3Q8CGV9 1081 aa12.61□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Stk3Q9JI10 497 aa12.61□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Abcc3B2RX12 1523 aa12.61□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Gadd45bP22339 160 aa12.61□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Ncbp3Q8BZR9 615 aaKnown RBP12.61□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Asxl2Q8BZ32 1370 aa12.6□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Smarce1O54941 411 aaKnown RBP12.6□□□□□ -0.39
Echdc1-201ENSMUST00000020034 ImpactO55091 318 aa12.6□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Gm21190A0A0G2JGJ6 266 aa12.6□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Idi2Q8BFZ6 227 aa12.6□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Aldh8a1Q8BH00 487 aa12.6□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Glipr1l2Q9CQ35 332 aa12.6□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Rnf17Q99MV7 1640 aa12.59□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Ptpdc1Q6NZK8 747 aa12.59□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Pabpn1Q8CCS6 302 aaKnown RBP12.59□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Rsph6aQ8CDR2 708 aa12.59□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Ppp6r3Q922D4 844 aa12.59□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Znf518aB2RRF6 1478 aaKnown RBP12.59□□□□□ -0.39
Echdc1-201ENSMUST00000020034 MsnP26041 577 aaKnown RBP12.59□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Zfp777B9EKF4 885 aa12.59□□□□□ -0.39
Echdc1-201ENSMUST00000020034 HnrnpmQ9D0E1 729 aaKnown RBP12.59□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Utp3Q9JI13 469 aaKnown RBP12.59□□□□□ -0.39
Echdc1-201ENSMUST00000020034 Ptch1Q61115 1434 aa12.58□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Olfml1Q8BSH2 233 aa12.58□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Ppp1r42Q8R1Z4 357 aa12.58□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Sytl4Q9R0Q1 673 aa12.58□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Sos1Q62245 1319 aa12.58□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Ddit3P35639 168 aa12.58□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Prim1P20664 417 aa12.58□□□□□ -0.4
Echdc1-201ENSMUST00000020034 KinQ8K339 391 aa12.58□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Pik3r4Q8VD65 1358 aa12.57□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Cyp27a1Q9DBG1 533 aa12.57□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Rcan3Q9JKK0 239 aa12.57□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Robo2Q7TPD3 1470 aa12.57□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Prrc2bQ7TPM1 1486 aaKnown RBP12.57□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Dhx16G3X8X0 1044 aaKnown RBP12.56□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Usp48Q3V0C5 1052 aa12.56□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Nos1Q9Z0J4 1429 aa12.56□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Map3k19E9Q3S4 1311 aa12.56□□□□□ -0.4
Echdc1-201ENSMUST00000020034 EvcP57680 1005 aa12.56□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Trim28Q62318 834 aa12.56□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Fam83gQ5SWY7 812 aa12.56□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Polr3gQ6NXY9 223 aa12.56□□□□□ -0.4
Echdc1-201ENSMUST00000020034 AnlnQ8K298 1121 aaKnown RBP12.56□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Sf3a1Q8K4Z5 791 aaKnown RBP12.56□□□□□ -0.4
Echdc1-201ENSMUST00000020034 MecomP14404 1042 aa12.55□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Mad1l1Q9WTX8 717 aaKnown RBP12.55□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Neurl4Q5NCX5 1563 aa12.55□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Cfdp1O88271 295 aaKnown RBP12.55□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Eif4a2P10630 407 aa12.55□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Smc3Q9CW03 1217 aaKnown RBP12.55□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Rims1Q99NE5 1463 aa12.55□□□□□ -0.4
Echdc1-201ENSMUST00000020034 ShprhQ7TPQ3 1674 aa12.55□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Cavin2Q63918 418 aaKnown RBP12.54□□□□□ -0.4
Echdc1-201ENSMUST00000020034 Cdc42bpbQ7TT50 1713 aa12.54□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms