RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 GOLGA8MH3BSY2 632 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 COCHO43405 550 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 KRT38O76015 456 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 JCHAINP01591 159 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 F11P03951 625 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 SHBGP04278 402 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 INHBAP08476 426 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 PRKCHP24723 683 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 GABRR2P28476 465 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 OR1E1P30953 314 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 SLC7A9P82251 487 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 ZNF177Q13360 481 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-234ENST00000642041 ARHGAP15Q53QZ3 475 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 RALGPS1Q5JS13 557 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 SPANXN3Q5MJ09 141 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 CAND1Q86VP6 1230 aaKnown RBP17.42■□□□□ 0.38
PHGDH-234ENST00000642041 TMC8Q8IU68 726 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 ARHGAP12Q8IWW6 846 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 NPWQ8N729 165 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 PDCD7Q8N8D1 485 aaKnown RBP17.42■□□□□ 0.38
PHGDH-234ENST00000642041 SGSM3Q96HU1 749 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 MAGEB5Q9BZ81 275 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 SLC25A51Q9H1U9 297 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 CCSER2Q9H7U1 834 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 SP110Q9HB58 689 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 GLOD4Q9HC38 313 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 RABGEF1Q9UJ41 708 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 NEU3Q9UQ49 428 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 RASA4BC9J798 803 aa17.41■□□□□ 0.38
PHGDH-234ENST00000642041 RASA4O43374 803 aa17.41■□□□□ 0.38
PHGDH-234ENST00000642041 ALDH1A2O94788 518 aa17.41■□□□□ 0.38
PHGDH-234ENST00000642041 MBL2P11226 248 aaPredicted RBP17.41■□□□□ 0.38
PHGDH-234ENST00000642041 HDCP19113 662 aa17.41■□□□□ 0.38
PHGDH-234ENST00000642041 PAPOLAP51003 745 aaKnown RBP17.41■□□□□ 0.38
PHGDH-234ENST00000642041 IRX4P78413 519 aa17.41■□□□□ 0.38
PHGDH-234ENST00000642041 SIM1P81133 766 aaPredicted RBP17.41■□□□□ 0.38
PHGDH-234ENST00000642041 RAP1GAP2Q684P5 730 aa17.41■□□□□ 0.38
PHGDH-234ENST00000642041 KCTD16Q68DU8 428 aa17.41■□□□□ 0.38
PHGDH-234ENST00000642041 SLC26A11Q86WA9 606 aa17.41■□□□□ 0.38
PHGDH-234ENST00000642041 CPXM2Q8N436 756 aa17.41■□□□□ 0.38
PHGDH-234ENST00000642041 TEX26Q8N6G2 289 aa17.41■□□□□ 0.38
PHGDH-234ENST00000642041 SHKBP1Q8TBC3 707 aa17.41■□□□□ 0.38
PHGDH-234ENST00000642041 SIGLEC10Q96LC7 697 aa17.41■□□□□ 0.38
PHGDH-234ENST00000642041 SMC6Q96SB8 1091 aa17.41■□□□□ 0.38
PHGDH-234ENST00000642041 IL21Q9HBE4 155 aa17.41■□□□□ 0.38
PHGDH-234ENST00000642041 CASS4Q9NQ75 786 aa17.41■□□□□ 0.38
PHGDH-234ENST00000642041 RBM22Q9NW64 420 aaKnown RBP eCLIP17.41■□□□□ 0.38
PHGDH-234ENST00000642041 NKIRAS1Q9NYS0 192 aa17.41■□□□□ 0.38
PHGDH-234ENST00000642041 NUDT5Q9UKK9 219 aa17.41■□□□□ 0.38
PHGDH-234ENST00000642041 TRAV19A0A0A6YYK7 116 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 SPAARA0A1B0GVQ0 90 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 PATE3B3GLJ2 98 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 KCNK1O00180 336 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 ZBTB24O43167 697 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-234ENST00000642041 KALRNO60229 2985 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 STC2O76061 302 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 EPOP01588 193 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 PSMB4P28070 264 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 HADHAP40939 763 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 SERINC3Q13530 473 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 LONRF1Q17RB8 773 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 STEAP4Q687X5 459 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 KCTD11Q693B1 232 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 NLRP9Q7RTR0 991 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 ARID3BQ8IVW6 561 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-234ENST00000642041 DNAAF3Q8N9W5 541 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 HJURPQ8NCD3 748 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-234ENST00000642041 FBF1Q8TES7 1133 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 PEX13Q92968 403 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 ZFYVE19Q96K21 471 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 LRRC3BQ96PB8 259 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 HHIPQ96QV1 700 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 DHRS4Q9BTZ2 278 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 LRRC3Q9BY71 257 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 MRM3Q9HC36 420 aaKnown RBP17.4■□□□□ 0.38
PHGDH-234ENST00000642041 EBF1Q9UH73 591 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 MAD1L1Q9Y6D9 718 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 DOCK4Q8N1I0 1966 aa17.4■□□□□ 0.38
PHGDH-234ENST00000642041 FAM237BA0A1B0GVD1 139 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 TCRBV7S3A2A0A539 114 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 USP1O94782 785 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 MAP3K6O95382 1288 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 TBX18O95935 607 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 KRT15P19012 456 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 PAMP19021 973 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 PGFP49763 221 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 GPX6P59796 221 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 GRSF1Q12849 480 aaKnown RBP eCLIP17.39■□□□□ 0.37
PHGDH-234ENST00000642041 SLC12A1Q13621 1099 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 TMEM196Q5HYL7 178 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 PMS2CLQ68D20 193 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 FSTL4Q6MZW2 842 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 HTR3DQ70Z44 454 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 PIP4P1Q86T03 277 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 C11orf74Q86VG3 221 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 SPATS2Q86XZ4 545 aaKnown RBP17.39■□□□□ 0.37
PHGDH-234ENST00000642041 LGI2Q8N0V4 545 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 CHCHD4Q8N4Q1 142 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 EPS8L3Q8TE67 593 aaKnown RBP17.39■□□□□ 0.37
PHGDH-234ENST00000642041 USP13Q92995 863 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms