RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 ANXA11P50995 505 aaKnown RBP17.68■□□□□ 0.42
SCARB2-223ENST00000640640 LIMK2P53671 638 aa17.68■□□□□ 0.42
SCARB2-223ENST00000640640 PSME3P61289 254 aa17.68■□□□□ 0.42
SCARB2-223ENST00000640640 SQLEQ14534 574 aa17.68■□□□□ 0.42
SCARB2-223ENST00000640640 TRMT10BQ6PF06 316 aaKnown RBP17.68■□□□□ 0.42
SCARB2-223ENST00000640640 CLYBLQ8N0X4 340 aa17.68■□□□□ 0.42
SCARB2-223ENST00000640640 SSU72Q9NP77 194 aaKnown RBP17.68■□□□□ 0.42
SCARB2-223ENST00000640640 CICQ96RK0 1608 aaPredicted RBP17.68■□□□□ 0.42
SCARB2-223ENST00000640640 TULP2O00295 520 aa17.68■□□□□ 0.42
SCARB2-223ENST00000640640 PPEF2O14830 753 aa17.68■□□□□ 0.42
SCARB2-223ENST00000640640 HK2P52789 917 aa17.68■□□□□ 0.42
SCARB2-223ENST00000640640 NRLP54845 237 aa17.68■□□□□ 0.42
SCARB2-223ENST00000640640 RHBDF2Q6PJF5 856 aa17.68■□□□□ 0.42
SCARB2-223ENST00000640640 BCO2Q9BYV7 579 aa17.68■□□□□ 0.42
SCARB2-223ENST00000640640 RPL26L1Q9UNX3 145 aaKnown RBP17.68■□□□□ 0.42
SCARB2-223ENST00000640640 TMEM88BA6NKF7 163 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 SH3BGRLO75368 114 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 METTL18O95568 372 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 APOA1P02647 267 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 PPM1AP35813 382 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 IRX1P78414 480 aaPredicted RBP17.67■□□□□ 0.42
SCARB2-223ENST00000640640 IRGCQ6NXR0 463 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 DSG4Q86SJ6 1040 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 STK32CQ86UX6 486 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 TRAPPC5Q8IUR0 188 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 RCN3Q96D15 328 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 C7orf26Q96N11 449 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 TRMOQ9BU70 441 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 NFKBIZQ9BYH8 718 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 OSBPL7Q9BZF2 842 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 WDR55Q9H6Y2 383 aaPredicted RBP17.67■□□□□ 0.42
SCARB2-223ENST00000640640 HPS4Q9NQG7 708 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 TBC1D23Q9NUY8 699 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 ALS2Q96Q42 1657 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 SLC9A3R1O14745 358 aaPredicted RBP17.67■□□□□ 0.42
SCARB2-223ENST00000640640 FANCGO15287 622 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 CLOCKO15516 846 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 SMNDC1O75940 238 aaKnown RBP eCLIP17.67■□□□□ 0.42
SCARB2-223ENST00000640640 COL6A2P12110 1019 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 GABRR2P28476 465 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 OGDHQ02218 1023 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 SFSWAPQ12872 951 aaKnown RBP17.67■□□□□ 0.42
SCARB2-223ENST00000640640 SCIMPQ6UWF3 145 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 YIPF2Q9BWQ6 316 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 AHSPQ9NZD4 102 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 TMCC3Q9ULS5 477 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 AZIN1O14977 448 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 IFNA14P01570 189 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 NUP107P57740 925 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 BNIP1Q12981 228 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 GRM3Q14832 879 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 SYPL2Q5VXT5 272 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 CLEC20AQ6ZU45 233 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 ULK2Q8IYT8 1036 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 PTCD2Q8WV60 388 aaKnown RBP17.67■□□□□ 0.42
SCARB2-223ENST00000640640 CRYGNQ8WXF5 182 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 DDX1Q92499 740 aaKnown RBP17.67■□□□□ 0.42
SCARB2-223ENST00000640640 PADI4Q9UM07 663 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 PTPRJQ12913 1337 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 MATN3O15232 486 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 C1RP00736 705 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 MC4RP32245 332 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 S100A5P33763 92 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 VARS2Q5ST30 1063 aaKnown RBP17.67■□□□□ 0.42
SCARB2-223ENST00000640640 FUT10Q6P4F1 479 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 METTL3Q86U44 580 aaKnown RBP17.67■□□□□ 0.42
SCARB2-223ENST00000640640 EFCAB3Q8N7B9 438 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 RSPH1Q8WYR4 309 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 PLK2Q9NYY3 685 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 H2AFY2Q9P0M6 372 aaPredicted RBP17.67■□□□□ 0.42
SCARB2-223ENST00000640640 ZNF229Q9UJW7 825 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 BTRCQ9Y297 605 aa17.67■□□□□ 0.42
SCARB2-223ENST00000640640 ATXN2Q99700 1313 aaKnown RBP17.66■□□□□ 0.42
SCARB2-223ENST00000640640 ULK1O75385 1050 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 ABCB1P08183 1280 aaPredicted RBP17.66■□□□□ 0.42
SCARB2-223ENST00000640640 PFKPQ01813 784 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 FIBCD1Q8N539 461 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 NAT8LQ8N9F0 302 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 SLC25A51Q9H1U9 297 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 SEMA6AQ9H2E6 1030 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.66■□□□□ 0.42
SCARB2-223ENST00000640640 C2orf71A6NGG8 1288 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 KCNU1A8MYU2 1149 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 TGDSO95455 350 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 OR4K2Q8NGD2 314 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 SIX4Q9UIU6 781 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 NR2E3Q9Y5X4 410 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 MOXD2PA6NHM9 499 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 PLIN3O60664 434 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 RGS20O76081 388 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 ALDH9A1P49189 494 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 NAA20P61599 178 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 DSC2Q02487 901 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 FNDC3BQ53EP0 1204 aaKnown RBP17.66■□□□□ 0.42
SCARB2-223ENST00000640640 LACTB2Q53H82 288 aaPredicted RBP17.66■□□□□ 0.42
SCARB2-223ENST00000640640 RFWD3Q6PCD5 774 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 TAS1R3Q7RTX0 852 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 OR6K2Q8NGY2 324 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 TEKT5Q96M29 485 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 FIZ1Q96SL8 496 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms