RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 IFT43Q96FT9 208 aa15.34■□□□□ 0.05
PAX6-268ENST00000640287 FCRL5Q96RD9 977 aa15.34■□□□□ 0.05
PAX6-268ENST00000640287 TDRD1Q9BXT4 1180 aaKnown RBP15.34■□□□□ 0.05
PAX6-268ENST00000640287 WSB2Q9NYS7 404 aaPredicted RBP15.34■□□□□ 0.05
PAX6-268ENST00000640287 DRG1Q9Y295 367 aaKnown RBP15.34■□□□□ 0.05
PAX6-268ENST00000640287 TBC1D3DA0A087WVF3 549 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 TBC1D3IA0A087WXS9 549 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 TBC1D3EA0A087X179 549 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 TBC1D3KA0A087X1G2 549 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 A0A1W2PQ67 120 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 TBC1D3FA6NER0 549 aaPredicted RBP15.33■□□□□ 0.05
PAX6-268ENST00000640287 UPK3BL1B0FP48 263 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 TBC1D3LB9A6J9 549 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 UPK3BL2E5RIL1 263 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 HTRA2O43464 458 aaPredicted RBP15.33■□□□□ 0.05
PAX6-268ENST00000640287 PLRG1O43660 514 aaKnown RBP15.33■□□□□ 0.05
PAX6-268ENST00000640287 PHF2O75151 1096 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 PMPCBO75439 489 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 GCATO75600 419 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 URI1O94763 535 aaPredicted RBP15.33■□□□□ 0.05
PAX6-268ENST00000640287 PCDH8O95206 1070 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 PGLSO95336 258 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 MMP2P08253 660 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 TBC1D3HP0C7X1 549 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 TIMP2P16035 220 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 PSMB4P28070 264 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 ELF2Q15723 593 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 UGP2Q16851 508 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 TBC1D3GQ6DHY5 549 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 TBC1D3CQ6IPX1 549 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 LPCAT2Q7L5N7 544 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 PRPF39Q86UA1 669 aaKnown RBP15.33■□□□□ 0.05
PAX6-268ENST00000640287 TBC1D3Q8IZP1 549 aaPredicted RBP15.33■□□□□ 0.05
PAX6-268ENST00000640287 TAB3Q8N5C8 712 aaPredicted RBP15.33■□□□□ 0.05
PAX6-268ENST00000640287 DEFB119Q8N690 84 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 LPCAT1Q8NF37 534 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 RAB7BQ96AH8 199 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 PCDH9Q9HC56 1237 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 FAM86C1Q9NVL1 165 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 FAM153AQ9UHL3 310 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 CHKBQ9Y259 395 aa15.33■□□□□ 0.05
PAX6-268ENST00000640287 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 TSPAN11A1L157 253 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 GOLGA6CA6NDK9 693 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 GOLGA6BA6NDN3 693 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 LILRB5O75023 590 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 PRKCGP05129 697 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 GOLGA6DP0CG33 693 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 NFKBIAP25963 317 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 COILP38432 576 aaPredicted RBP15.33■□□□□ 0.04
PAX6-268ENST00000640287 ABL2P42684 1182 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 FAM193AP78312 1265 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 LMNB2Q03252 620 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 LPAL2Q16609 132 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 CCDC137Q6PK04 289 aaKnown RBP15.33■□□□□ 0.04
PAX6-268ENST00000640287 ARMCX6Q7L4S7 300 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 ZSWIM9Q86XI8 627 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 TMEFF1Q8IYR6 380 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 NDUFAF2Q8N183 169 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 C12orf50Q8NA57 414 aaPredicted RBP15.33■□□□□ 0.04
PAX6-268ENST00000640287 IPMKQ8NFU5 416 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 OR2T34Q8NGX1 318 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 ATL2Q8NHH9 583 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 SNX19Q92543 992 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 ECHDC3Q96DC8 303 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 RTP4Q96DX8 246 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 PPP1R2P1Q96PQ5 205 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 FSD1LQ9BXM9 530 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 ADGRE3Q9BY15 652 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 PCDH12Q9NPG4 1184 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 VPS45Q9NRW7 570 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 GOLGA6AQ9NYA3 693 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 RAB23Q9ULC3 237 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 ITM2BQ9Y287 266 aa15.33■□□□□ 0.04
PAX6-268ENST00000640287 MEI4A8MW99 385 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 ANXA9O76027 345 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 RHOBTB1O94844 696 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 FSBPO95073 299 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 PDHA1P08559 390 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 ETS1P14921 441 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 FNTAP49354 379 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 DHPSP49366 369 aaPredicted RBP15.32■□□□□ 0.04
PAX6-268ENST00000640287 SUOXP51687 545 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 GEMP55040 296 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 CDK18Q07002 472 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 ELP6Q0PNE2 266 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 MPP3Q13368 585 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 IHHQ14623 411 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 CYP1B1Q16678 543 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 CCDC70Q6NSX1 233 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 TTC27Q6P3X3 843 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 PRUNE1Q86TP1 453 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 KIF18AQ8NI77 898 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 GRK7Q8WTQ7 553 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 FAM131CQ96AQ9 280 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 LRRC45Q96CN5 670 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 RMDN1Q96DB5 314 aa15.32■□□□□ 0.04
PAX6-268ENST00000640287 OXNAD1Q96HP4 312 aaPredicted RBP15.32■□□□□ 0.04
PAX6-268ENST00000640287 DDX47Q9H0S4 455 aaKnown RBP15.32■□□□□ 0.04
PAX6-268ENST00000640287 KDM4CQ9H3R0 1056 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms