RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, human

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-222	ENST00000638959	MSANTD2	Q6P1R3	559 aa		0.64	□□□□□ -2.31
LMBR1-222	ENST00000638959	CRTC1	Q6UUV9	634 aa		0.64	□□□□□ -2.31
LMBR1-222	ENST00000638959	DGKH	Q86XP1	1220 aa		0.64	□□□□□ -2.31
LMBR1-222	ENST00000638959	TMC8	Q8IU68	726 aa		0.64	□□□□□ -2.31
LMBR1-222	ENST00000638959	ARRDC2	Q8TBH0	407 aa		0.64	□□□□□ -2.31
LMBR1-222	ENST00000638959	DIS3L	Q8TF46	1054 aa	Known RBP	0.64	□□□□□ -2.31
LMBR1-222	ENST00000638959	SCRN2	Q96FV2	425 aa		0.64	□□□□□ -2.31
LMBR1-222	ENST00000638959	FRG2B	Q96QU4	278 aa		0.64	□□□□□ -2.31
LMBR1-222	ENST00000638959	LRRC61	Q9BV99	259 aa		0.64	□□□□□ -2.31
LMBR1-222	ENST00000638959	BICC1	Q9H694	974 aa	Known RBP	0.64	□□□□□ -2.31
LMBR1-222	ENST00000638959	PLCXD1	Q9NUJ7	323 aa		0.64	□□□□□ -2.31
LMBR1-222	ENST00000638959	CDC14A	Q9UNH5	594 aa		0.64	□□□□□ -2.31
LMBR1-222	ENST00000638959	DISP3	Q9P2K9	1392 aa		0.64	□□□□□ -2.31
LMBR1-222	ENST00000638959	IGLV5-45	A0A087WSX0	123 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	GXYLT2	A0PJZ3	443 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	RHPN2P1	A8MT19	583 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	ISM1	B1AKI9	464 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959		H0Y9J4	135 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959		M0QYT0	321 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	ZIC3	O60481	467 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	WDR1	O75083	606 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	NDUFS7	O75251	213 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	OFD1	O75665	1012 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	ZFAND5	O76080	213 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	MMP2	P08253	660 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	ACADM	P11310	421 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	FCGR2A	P12318	317 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	GRK5	P34947	590 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	GPR12	P47775	334 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	OAZ1	P54368	228 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	PPARD	Q03181	441 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	CHAF1A	Q13111	956 aa	Predicted RBP	0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	CAPS	Q13938	189 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	C2CD6	Q53TS8	623 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	MRNIP	Q6NTE8	343 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	PWWP2B	Q6NUJ5	590 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	KRBA2	Q6ZNG9	492 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	SH2D5	Q6ZV89	423 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	MAEA	Q7L5Y9	396 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	SDR16C5	Q8N3Y7	309 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	ATOH1	Q92858	354 aa	Predicted RBP	0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	GMPPA	Q96IJ6	420 aa	Predicted RBP	0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	NUDT22	Q9BRQ3	303 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	ADPRHL2	Q9NX46	363 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	DDX56	Q9NY93	547 aa	Known RBP	0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	SLC25A13	Q9UJS0	675 aa		0.63	□□□□□ -2.31
LMBR1-222	ENST00000638959	CYP3A7-CYP3A51P	A0A087WV96	503 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	TMEM247	A6NEH6	219 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959		A6NL46	340 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959		H3BML4	177 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	PRPF3	O43395	683 aa	Known RBP	0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	DDAH2	O95865	285 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	IGHV4-39	P01824	125 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	MT-ND5	P03915	603 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	ITGA5	P08648	1049 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	HOXB9	P17482	250 aa	Predicted RBP	0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	KLK2	P20151	261 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	CYP3A7	P24462	503 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	NFKBIA	P25963	317 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	PIK3CB	P42338	1070 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	MMP14	P50281	582 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	SNX16	P57768	344 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	FOXL2	P58012	376 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	NDP	Q00604	133 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	GAGE5	Q13069	117 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	GAGE6	Q13070	117 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	ATP1A4	Q13733	1029 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	CSHL1	Q14406	222 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	LPIN1	Q14693	890 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	C15orf32	Q32M92	178 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	HIGD2B	Q4VC39	106 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	TECRL	Q5HYJ1	363 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	TMEM240	Q5SV17	173 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	IFIT1B	Q5T764	474 aa	Known RBP	0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	TMEM268	Q5VZI3	342 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	RRAGB	Q5VZM2	374 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	DARS2	Q6PI48	645 aa	Known RBP	0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	SCML4	Q8N228	414 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	POM121L12	Q8N7R1	296 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	PPP1R35	Q8TAP8	253 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	MRGPRD	Q8TDS7	321 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	SENP5	Q96HI0	755 aa	Predicted RBP	0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	SNX22	Q96L94	193 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	SYT15	Q9BQS2	421 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	PAAF1	Q9BRP4	392 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	PUS3	Q9BZE2	481 aa	Known RBP	0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	C22orf23	Q9BZE7	217 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	WFDC1	Q9HC57	220 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	RAB21	Q9UL25	225 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	PADI1	Q9ULC6	663 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	OGDHL	Q9ULD0	1010 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	SLC12A4	Q9UP95	1085 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	OSGIN2	Q9Y236	505 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	COPG1	Q9Y678	874 aa	Known RBP	0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	STK36	Q9NRP7	1315 aa		0.62	□□□□□ -2.31
LMBR1-222	ENST00000638959	PLRG1	O43660	514 aa	Known RBP	0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	DUS4L	O95620	317 aa	Known RBP	0.61	□□□□□ -2.31

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