RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 SFMBT1Q9UHJ3 866 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 MRPL42Q9Y6G3 142 aaKnown RBP11□□□□□ -0.65
SNIP1-204ENST00000638725 C11orf97A0A1B0GVM6 126 aaPredicted RBP11□□□□□ -0.65
SNIP1-204ENST00000638725 ATP6AP2A0A1C7CYW4 349 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 A8MT66 165 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 ATP6AP2O75787 350 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 ZNF189O75820 626 aaPredicted RBP11□□□□□ -0.65
SNIP1-204ENST00000638725 GNAO1P09471 354 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 USP17L7P0C7H9 530 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 TSPAN8P19075 237 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 DNAJB1P25685 340 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 GRIA3P42263 894 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 CD151P48509 253 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 AIF1P55008 147 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 DNAJB13P59910 316 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 PRKCQQ04759 706 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 ZNF789Q5FWF6 425 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 TECRLQ5HYJ1 363 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 WSCD1Q658N2 575 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 DENND5AQ6IQ26 1287 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 LIMS2Q7Z4I7 341 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 PHF21BQ96EK2 531 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 DUS3LQ96G46 650 aaKnown RBP11□□□□□ -0.65
SNIP1-204ENST00000638725 MAML3Q96JK9 1138 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 RANBP9Q96S59 729 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 COLEC11Q9BWP8 271 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 TKTL2Q9H0I9 626 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 CLK4Q9HAZ1 481 aaKnown RBP11□□□□□ -0.65
SNIP1-204ENST00000638725 FBRSL1Q9HCM7 1045 aaKnown RBP11□□□□□ -0.65
SNIP1-204ENST00000638725 TMEM181Q9P2C4 612 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 EBF1Q9UH73 591 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 PPP2R3BQ9Y5P8 575 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 SQORQ9Y6N5 450 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 MYLKQ15746 1914 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 ASB14A6NK59 587 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 DFFAO00273 331 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 NRP2O60462 931 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 CPB1P15086 417 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 UGT1A6P19224 532 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 WARSP23381 471 aaKnown RBP10.99□□□□□ -0.65
SNIP1-204ENST00000638725 SLC12A2P55011 1212 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 LILRA4P59901 499 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 TUBA4AP68366 448 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 CCNA1P78396 465 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 CTBSQ01459 385 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 SV2CQ496J9 727 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 SAMD4BQ5PRF9 694 aaKnown RBP10.99□□□□□ -0.65
SNIP1-204ENST00000638725 BTBD8Q5XKL5 378 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 CLEC6AQ6EIG7 209 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 DHFR2Q86XF0 187 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 CLVS1Q8IUQ0 354 aaPredicted RBP10.99□□□□□ -0.65
SNIP1-204ENST00000638725 PPHLN1Q8NEY8 458 aaKnown RBP10.99□□□□□ -0.65
SNIP1-204ENST00000638725 EFHD1Q9BUP0 239 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 ATXN3LQ9H3M9 355 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 TMEM30AQ9NV96 361 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 RRN3Q9NYV6 651 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 CACNG4Q9UBN1 327 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 FBXO5Q9UKT4 447 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 FAF1Q9UNN5 650 aaPredicted RBP10.99□□□□□ -0.65
SNIP1-204ENST00000638725 A0A087X1B8 175 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 FAM155AB1AL88 458 aaPredicted RBP10.99□□□□□ -0.65
SNIP1-204ENST00000638725 AP3B1O00203 1094 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 IPO13O94829 963 aaKnown RBP10.99□□□□□ -0.65
SNIP1-204ENST00000638725 PNPLA4P41247 253 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 CHRNA4P43681 627 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 ENTPD1P49961 510 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 PLOD1Q02809 727 aaPredicted RBP10.99□□□□□ -0.65
SNIP1-204ENST00000638725 SEPT6Q14141 434 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 ARL13BQ3SXY8 428 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 PPP4R4Q6NUP7 873 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 ANKFN1Q8N957 763 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 HM13Q8TCT9 377 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 TFAP2CQ92754 450 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 LRCH3Q96II8 777 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 OLFM1Q99784 485 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 SLC25A23Q9BV35 468 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 WDCPQ9H6R7 721 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 SPON1Q9HCB6 807 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 SLC8A2Q9UPR5 921 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 TCAF1Q9Y4C2 921 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 CROCCQ5TZA2 2017 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 TANC1Q9C0D5 1861 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 FAM149AA5PLN7 773 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 GPR32O75388 356 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 BMP10O95393 424 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 DNAJB2P25686 324 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 KPNA2P52292 529 aaKnown RBP10.99□□□□□ -0.65
SNIP1-204ENST00000638725 PFKPQ01813 784 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 PSMD5Q16401 504 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 FAM45BPQ6NSW5 357 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 C8orf82Q6P1X6 216 aaPredicted RBP10.99□□□□□ -0.65
SNIP1-204ENST00000638725 CYHR1Q6ZMK1 362 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 ERMP1Q7Z2K6 904 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 TRIM74Q86UV6 250 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 TRIM73Q86UV7 250 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 ZNF786Q8N393 782 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 C2CD4AQ8NCU7 369 aaPredicted RBP10.99□□□□□ -0.65
SNIP1-204ENST00000638725 OR2T34Q8NGX1 318 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 OR2T3Q8NH03 318 aa10.99□□□□□ -0.65
SNIP1-204ENST00000638725 FNDC8Q8TC99 324 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms