RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 NAPGQ99747 312 aaPredicted RBP7.95□□□□□ -1.14
PNKP-229ENST00000637897 CNPY3Q9BT09 278 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 SNRNP25Q9BV90 132 aaKnown RBP7.95□□□□□ -1.14
PNKP-229ENST00000637897 SLC17A9Q9BYT1 436 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 SLC39A8Q9C0K1 460 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 ZDHHC6Q9H6R6 413 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 ETNK2Q9NVF9 386 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 KLHL11Q9NVR0 708 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 GUCA1BQ9UMX6 200 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 GPSM3Q9Y4H4 160 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 PCDHA13Q9Y5I0 950 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 MRFAP1Q9Y605 127 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 BPTFQ12830 3046 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 TSPAN11A1L157 253 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 TTC24A2A3L6 582 aaPredicted RBP7.94□□□□□ -1.14
PNKP-229ENST00000637897 EFCAB8A8MWE9 144 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 PJA2O43164 708 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 TLX3O43711 291 aaPredicted RBP7.94□□□□□ -1.14
PNKP-229ENST00000637897 CREB3O43889 395 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 DFNA5O60443 496 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 LRCH4O75427 683 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 NEBLO76041 1014 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 PCDH8O95206 1070 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 PIGNO95427 931 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 LDOC1O95751 146 aaPredicted RBP7.94□□□□□ -1.14
PNKP-229ENST00000637897 FTLP02792 175 aaPredicted RBP7.94□□□□□ -1.14
PNKP-229ENST00000637897 PRKCGP05129 697 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 ITGAVP06756 1048 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 CELA2BP08218 269 aaPredicted RBP7.94□□□□□ -1.14
PNKP-229ENST00000637897 HNRNPA2B1P22626 353 aaKnown RBP7.94□□□□□ -1.14
PNKP-229ENST00000637897 IL4RP24394 825 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 EPHB2P29323 1055 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 MIPP30301 263 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 IGFALSP35858 605 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 MAGEA1P43355 309 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 DNA2P51530 1060 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 INSM1Q01101 510 aaPredicted RBP7.94□□□□□ -1.14
PNKP-229ENST00000637897 CYP4F3Q08477 520 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 SFSWAPQ12872 951 aaKnown RBP7.94□□□□□ -1.14
PNKP-229ENST00000637897 OVGP1Q12889 678 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 STAT4Q14765 748 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 SUZ12Q15022 739 aaKnown RBP7.94□□□□□ -1.14
PNKP-229ENST00000637897 SLC18A3Q16572 532 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 ARL13BQ3SXY8 428 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 SETMARQ53H47 684 aaPredicted RBP7.94□□□□□ -1.14
PNKP-229ENST00000637897 CCDC157Q569K6 752 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 ZNF805Q5CZA5 627 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 KYAT3Q6YP21 454 aaKnown RBP7.94□□□□□ -1.14
PNKP-229ENST00000637897 RNF10Q8N5U6 811 aaKnown RBP7.94□□□□□ -1.14
PNKP-229ENST00000637897 CEP112Q8N8E3 955 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 TP53I13Q8NBR0 393 aaPredicted RBP7.94□□□□□ -1.14
PNKP-229ENST00000637897 MSANTD4Q8NCY6 345 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 TRIM58Q8NG06 486 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 RFFLQ8WZ73 363 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 ANKRD7Q92527 254 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 ARHGEF26Q96DR7 871 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 VCPIP1Q96JH7 1222 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 BTBD6Q96KE9 485 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 LENG8Q96PV6 779 aaPredicted RBP7.94□□□□□ -1.14
PNKP-229ENST00000637897 ISCUQ9H1K1 167 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 RETREG1Q9H6L5 497 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 SEPT11Q9NVA2 429 aaKnown RBP7.94□□□□□ -1.14
PNKP-229ENST00000637897 TMEM51Q9NW97 253 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 CWC15Q9P013 229 aaKnown RBP7.94□□□□□ -1.14
PNKP-229ENST00000637897 DKK4Q9UBT3 224 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 FTSJ1Q9UET6 329 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 PCSK1NQ9UHG2 260 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 CDC23Q9UJX2 597 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 TPX2Q9ULW0 747 aaKnown RBP7.94□□□□□ -1.14
PNKP-229ENST00000637897 RAXQ9Y2V3 346 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 PCDHGA1Q9Y5H4 931 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 HS3ST3A1Q9Y663 406 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 KIF26BQ2KJY2 2108 aa7.94□□□□□ -1.14
PNKP-229ENST00000637897 ANKRD36A6QL64 1941 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 LRP4O75096 1905 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 IGSF10Q6WRI0 2623 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 A0A0U1RQJ8 604 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 SPTY2D1-AS1A0A0U1RR47 76 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 KRIT1O00522 736 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 TRAFD1O14545 582 aaPredicted RBP7.93□□□□□ -1.14
PNKP-229ENST00000637897 FANCGO15287 622 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 BUB1O43683 1085 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 PRAMEF11O60813 436 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 MMP20O60882 483 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 GCATO75600 419 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 POP4O95707 220 aaKnown RBP7.93□□□□□ -1.14
PNKP-229ENST00000637897 GZMAP12544 262 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 ERCC2P18074 760 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 TNFAIP3P21580 790 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 ACP1P24666 158 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 NUDT1P36639 197 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 PAPOLAP51003 745 aaKnown RBP7.93□□□□□ -1.14
PNKP-229ENST00000637897 YBEYP58557 167 aaPredicted RBP7.93□□□□□ -1.14
PNKP-229ENST00000637897 RALGDSQ12967 914 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 TARDBPQ13148 414 aaKnown RBP eCLIP7.93□□□□□ -1.14
PNKP-229ENST00000637897 DPYSQ14117 519 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 PTPRRQ15256 657 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 WHAMMP3Q1A5X7 153 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 INO80DQ53TQ3 878 aaPredicted RBP7.93□□□□□ -1.14
PNKP-229ENST00000637897 FAM182AQ5T1J6 154 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms