RNA–Protein interactions for RNA: ENST00000637467.1

MECP2-221, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-221ENST00000637467 NDUFAF4Q9P032 175 aa0.77□□□□□ -2.29
MECP2-221ENST00000637467 COL5A2P05997 1499 aaPredicted RBP0.77□□□□□ -2.29
MECP2-221ENST00000637467 CACNA1FO60840 1977 aa0.77□□□□□ -2.29
MECP2-221ENST00000637467 A0A0G2JLW4 131 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 TARSL2A2RTX5 802 aaKnown RBP0.76□□□□□ -2.29
MECP2-221ENST00000637467 TYW5A2RUC4 315 aaKnown RBP0.76□□□□□ -2.29
MECP2-221ENST00000637467 ANKRD62A6NC57 917 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 GOLGA6L9A6NEM1 432 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 SMIM1B2RUZ4 78 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 HHLA1C9JL84 531 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 J3KR12 359 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 NR5A2O00482 541 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 PIP5K1BO14986 540 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 MID1O15344 667 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 TSPAN6O43657 245 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 HBP1O60381 514 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 PLA2G6O60733 806 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 METTL18O95568 372 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 PCNAP12004 261 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 CDH1P12830 882 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 TNNT1P13805 278 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 ARSAP15289 507 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 CTPS1P17812 591 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 KRT9P35527 623 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 GNL1P36915 607 aaPredicted RBP0.76□□□□□ -2.29
MECP2-221ENST00000637467 TMPOP42166 694 aaKnown RBP0.76□□□□□ -2.29
MECP2-221ENST00000637467 MMP14P50281 582 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 KRTAP12-2P59991 146 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 KRTAP10-8P60410 259 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 TNFAIP2Q03169 654 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 GOLGA8FQ08AF8 430 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 TBL3Q12788 808 aaKnown RBP0.76□□□□□ -2.29
MECP2-221ENST00000637467 PMS2P11Q13670 270 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 RPS6KA2Q15349 733 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 ZNF239Q16600 458 aaKnown RBP0.76□□□□□ -2.29
MECP2-221ENST00000637467 KRT24Q2M2I5 525 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 SLC35G1Q2M3R5 365 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 RUNDC3AQ59EK9 446 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 XKR6Q5GH73 641 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 KCNT1Q5JUK3 1230 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 FAM209BQ5JX69 171 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 IZUMO3Q5VZ72 239 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 TRIM65Q6PJ69 517 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 KIAA1324Q6UXG2 1013 aaKnown RBP0.76□□□□□ -2.29
MECP2-221ENST00000637467 ATF7IPQ6VMQ6 1270 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 RAB11FIP2Q7L804 512 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 MON1AQ86VX9 555 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 KMT5CQ86Y97 462 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 HERC6Q8IVU3 1022 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP0.76□□□□□ -2.29
MECP2-221ENST00000637467 ZNF440Q8IYI8 595 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 RNF113BQ8IZP6 322 aaKnown RBP0.76□□□□□ -2.29
MECP2-221ENST00000637467 PTGR2Q8N8N7 351 aaPredicted RBP0.76□□□□□ -2.29
MECP2-221ENST00000637467 FSIP1Q8NA03 581 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 ANKRD52Q8NB46 1076 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 SLC24A4Q8NFF2 622 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 FGFBP3Q8TAT2 258 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 WDR20Q8TBZ3 569 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 PPM1EQ8WY54 764 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 NCSTNQ92542 709 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 MUL1Q969V5 352 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 ARRDC3Q96B67 414 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 ZNF689Q96CS4 500 aaPredicted RBP0.76□□□□□ -2.29
MECP2-221ENST00000637467 SCRN2Q96FV2 425 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 GPATCH3Q96I76 525 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 ZNF583Q96ND8 569 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 CSF3RQ99062 836 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 TBCBQ99426 244 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 MYD88Q99836 296 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 OPRPNQ99935 248 aaPredicted RBP0.76□□□□□ -2.29
MECP2-221ENST00000637467 KXD1Q9BQD3 176 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 FSD1Q9BTV5 496 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 KATNAL1Q9BW62 490 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 PDZD7Q9H5P4 517 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 ACAD9Q9H845 621 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 ERVMER34-1Q9H9K5 563 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 CERS4Q9HA82 394 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 C17orf75Q9HAS0 396 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 LRRC4Q9HBW1 653 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 WDR6Q9NNW5 1121 aaKnown RBP0.76□□□□□ -2.29
MECP2-221ENST00000637467 CCDC177Q9NQR7 707 aaPredicted RBP0.76□□□□□ -2.29
MECP2-221ENST00000637467 CHST12Q9NRB3 414 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 ATP8A2Q9NTI2 1148 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 MCM9Q9NXL9 1143 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 IFT80Q9P2H3 777 aaPredicted RBP0.76□□□□□ -2.29
MECP2-221ENST00000637467 UPB1Q9UBR1 384 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 SLC9A2Q9UBY0 812 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 SLC39A10Q9ULF5 831 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 KCNS2Q9ULS6 477 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 CDC14AQ9UNH5 594 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 FAF1Q9UNN5 650 aaPredicted RBP0.76□□□□□ -2.29
MECP2-221ENST00000637467 C19orf53Q9UNZ5 99 aaPredicted RBP0.76□□□□□ -2.29
MECP2-221ENST00000637467 THRAP3Q9Y2W1 955 aaKnown RBP0.76□□□□□ -2.29
MECP2-221ENST00000637467 AMDHD2Q9Y303 409 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 PCDHGB5Q9Y5G0 923 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 CLDN16Q9Y5I7 305 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 EID1Q9Y6B2 187 aa0.76□□□□□ -2.29
MECP2-221ENST00000637467 ANO9A1A5B4 782 aa0.75□□□□□ -2.29
MECP2-221ENST00000637467 FAM90A18PA6NE21 464 aa0.75□□□□□ -2.29
MECP2-221ENST00000637467 FAM90A16PA6NEW6 464 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms