RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ARHGEF17Q96PE2 2063 aaPredicted RBP18.35■□□□□ 0.53
CLN6-212ENST00000636020 OTOGQ6ZRI0 2925 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 ILVBLA1L0T0 632 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 CD160O95971 181 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 GLI1P08151 1106 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 ELAVL4P26378 380 aaKnown RBP18.34■□□□□ 0.53
CLN6-212ENST00000636020 OR1E1P30953 314 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 OR1D5P58170 312 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 CLPPQ16740 277 aaPredicted RBP18.34■□□□□ 0.53
CLN6-212ENST00000636020 WSCD2Q2TBF2 565 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 AMZ1Q400G9 498 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 LRRC73Q5JTD7 316 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 TAF8Q7Z7C8 310 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 TTC7BQ86TV6 843 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 PPM1KQ8N3J5 372 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 CXorf40AQ8TE69 158 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 PDXPQ96GD0 296 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 CCDC74BQ96LY2 380 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 PHF12Q96QT6 1004 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 APOOQ9BUR5 198 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 PRDM8Q9NQV8 689 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 ASNSD1Q9NWL6 643 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 SNX10Q9Y5X0 201 aa18.34■□□□□ 0.53
CLN6-212ENST00000636020 CHD5Q8TDI0 1954 aa18.33■□□□□ 0.53
CLN6-212ENST00000636020 PRRC2CQ9Y520 2896 aaKnown RBP18.33■□□□□ 0.53
CLN6-212ENST00000636020 LOC101059948A0A1B0GTJ6 334 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 EFCAB7A8K855 629 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 I6L893 689 aaPredicted RBP18.33■□□□□ 0.52
CLN6-212ENST00000636020 UGT2B4P06133 528 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 ITIH2P19823 946 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 LRRC14Q15048 493 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 MEA1Q16626 185 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 ARTNQ5T4W7 220 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 SPECC1LQ69YQ0 1117 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 TCTN3Q6NUS6 607 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 ZNF783Q6ZMS7 281 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 MAMDC2Q7Z304 686 aaPredicted RBP18.33■□□□□ 0.52
CLN6-212ENST00000636020 RYBPQ8N488 228 aaPredicted RBP18.33■□□□□ 0.52
CLN6-212ENST00000636020 AGBL5Q8NDL9 886 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 CCDC112Q8NEF3 446 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 ATL2Q8NHH9 583 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 SLC35C1Q96A29 364 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 KIAA1143Q96AT1 154 aaPredicted RBP18.33■□□□□ 0.52
CLN6-212ENST00000636020 WDR92Q96MX6 357 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 KLHL32Q96NJ5 620 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 ASPSCR1Q9BZE9 553 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 SPRY4Q9C004 299 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 METTL14Q9HCE5 456 aaKnown RBP18.33■□□□□ 0.52
CLN6-212ENST00000636020 ATP13A1Q9HD20 1204 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 SLC39A1Q9NY26 324 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 USP25Q9UHP3 1055 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 OR1A2Q9Y585 309 aa18.33■□□□□ 0.52
CLN6-212ENST00000636020 HIVEP3Q5T1R4 2406 aa18.32■□□□□ 0.52
CLN6-212ENST00000636020 B4DGG1 531 aa18.32■□□□□ 0.52
CLN6-212ENST00000636020 KRIT1O00522 736 aa18.32■□□□□ 0.52
CLN6-212ENST00000636020 GRAP2O75791 330 aa18.32■□□□□ 0.52
CLN6-212ENST00000636020 DDAH2O95865 285 aa18.32■□□□□ 0.52
CLN6-212ENST00000636020 CD1CP29017 333 aa18.32■□□□□ 0.52
CLN6-212ENST00000636020 LIMK2P53671 638 aa18.32■□□□□ 0.52
CLN6-212ENST00000636020 TRA2AQ13595 282 aaKnown RBP eCLIP18.32■□□□□ 0.52
CLN6-212ENST00000636020 INPP5AQ14642 412 aa18.32■□□□□ 0.52
CLN6-212ENST00000636020 CRTC2Q53ET0 693 aaPredicted RBP18.32■□□□□ 0.52
CLN6-212ENST00000636020 ZNF438Q7Z4V0 828 aa18.32■□□□□ 0.52
CLN6-212ENST00000636020 IRF2BP1Q8IU81 584 aa18.32■□□□□ 0.52
CLN6-212ENST00000636020 EFCAB3Q8N7B9 438 aa18.32■□□□□ 0.52
CLN6-212ENST00000636020 OR1E3Q8WZA6 343 aa18.32■□□□□ 0.52
CLN6-212ENST00000636020 INTS4Q96HW7 963 aaKnown RBP18.32■□□□□ 0.52
CLN6-212ENST00000636020 EFHD1Q9BUP0 239 aa18.32■□□□□ 0.52
CLN6-212ENST00000636020 WRAP53Q9BUR4 548 aaKnown RBP18.32■□□□□ 0.52
CLN6-212ENST00000636020 OSBPL1AQ9BXW6 950 aa18.32■□□□□ 0.52
CLN6-212ENST00000636020 DPEP2Q9H4A9 486 aa18.32■□□□□ 0.52
CLN6-212ENST00000636020 UPF2Q9HAU5 1272 aaKnown RBP18.32■□□□□ 0.52
CLN6-212ENST00000636020 ARHGEF38Q9NXL2 777 aa18.32■□□□□ 0.52
CLN6-212ENST00000636020 ZNF212Q9UDV6 495 aa18.32■□□□□ 0.52
CLN6-212ENST00000636020 IGLV3-10A0A075B6K4 115 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 SLC16A3O15427 465 aaKnown RBP18.31■□□□□ 0.52
CLN6-212ENST00000636020 HSF2BPO75031 334 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 POP4O95707 220 aaKnown RBP18.31■□□□□ 0.52
CLN6-212ENST00000636020 TIMP2P16035 220 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 MAP4P27816 1152 aaKnown RBP18.31■□□□□ 0.52
CLN6-212ENST00000636020 ALDH4A1P30038 563 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 MC1RQ01726 317 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 DPYDQ12882 1025 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 PDCLQ13371 301 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 NR1D2Q14995 579 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 MYLK3Q32MK0 819 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 EFHC1Q5JVL4 640 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 ATP1A1-AS1Q5TC04 95 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 OTUD1Q5VV17 481 aaPredicted RBP18.31■□□□□ 0.52
CLN6-212ENST00000636020 LRRC31Q6UY01 552 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 ASB18Q6ZVZ8 466 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 RRAGAQ7L523 313 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 UNC5BQ8IZJ1 945 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 NLGN4XQ8N0W4 816 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 NLGN4YQ8NFZ3 816 aaPredicted RBP18.31■□□□□ 0.52
CLN6-212ENST00000636020 LMO3Q8TAP4 145 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 TKTL2Q9H0I9 626 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 WDCPQ9H6R7 721 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 PIGVQ9NUD9 493 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 OCIAD1Q9NX40 245 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms