RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 NF2P35240 595 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 PSMC2P35998 433 aaKnown RBP2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 LIPAP38571 399 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 IGHMBP2P38935 993 aaKnown RBP2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 RFX5P48382 616 aaPredicted RBP2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 CASP6P55212 293 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 SP3Q02447 781 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 NEXNQ0ZGT2 675 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 PPIL2Q13356 520 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 DNASE1L3Q13609 305 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 TNFAIP1Q13829 316 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 PDE1CQ14123 709 aaPredicted RBP2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 ZNF484Q5JVG2 852 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 WDR45BQ5MNZ6 344 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 ZNF618Q5T7W0 954 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 SLC9C2Q5TAH2 1124 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 GRHL2Q6ISB3 625 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 ACAD10Q6JQN1 1059 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 APOBEC3HQ6NTF7 200 aaKnown RBP2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 C17orf99Q6UX52 265 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 NEK10Q6ZWH5 1172 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 MAVSQ7Z434 540 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 ZNF804AQ7Z570 1209 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 PTGR2Q8N8N7 351 aaPredicted RBP2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 FSIP1Q8NA03 581 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 ADAMTS18Q8TE60 1221 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 SNRNP27Q8WVK2 155 aaKnown RBP2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 NPIPB3Q92617 1050 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 GLG1Q92896 1179 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 CTHRC1Q96CG8 243 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 COQ8BQ96D53 544 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 WDYHV1Q96HA8 205 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 VPS50Q96JG6 964 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 FAR2Q96K12 515 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 FAM84BQ96KN1 310 aaPredicted RBP2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 NEUROD6Q96NK8 337 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 EIF3CQ99613 913 aaKnown RBP2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 TREX2Q9BQ50 279 aaPredicted RBP2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 ALG8Q9BVK2 526 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 TMEM39BQ9GZU3 492 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 OLA1Q9NTK5 396 aaKnown RBP2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 IRAK4Q9NWZ3 460 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 GABRQQ9UN88 632 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 ARHGAP26Q9UNA1 814 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 LAS1LQ9Y4W2 734 aaKnown RBP2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 PCDHB7Q9Y5E2 793 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 CYP46A1Q9Y6A2 500 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 DCHS1Q96JQ0 3298 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 GREB1LQ9C091 1923 aaPredicted RBP2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 MROH5Q6ZUA9 1318 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 SALL1Q9NSC2 1324 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 NAV1Q8NEY1 1877 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 LRRC37A2A6NM11 1700 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 CCL15-CCL14A0A0B4J2E2 113 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 A0A1W2PPC1 479 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 ANKRD18BA2A2Z9 1011 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 H0YGN5 161 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 H0YIZ8 118 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 K7ENM7 598 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 M0QYT0 321 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 M0QZQ0 153 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 SPRY2O43597 315 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 KRT86O43790 486 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 HEXIM1O94992 359 aaKnown RBP2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 CYP3A4P08684 503 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 IL6RP08887 468 aaPredicted RBP2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 CSF1P09603 554 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 ADRA1DP25100 572 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 THBS4P35443 961 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 PNPLA4P41247 253 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 GYG1P46976 350 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 PRMT2P55345 433 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 FAM3BP58499 235 aaPredicted RBP2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 KRTAP10-12P60413 245 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 RPL15P61313 204 aaKnown RBP2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 SUMO2P61956 95 aaKnown RBP2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 DCAF7P61962 342 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 TLE3Q04726 772 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 PPATQ06203 517 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 TBL3Q12788 808 aaKnown RBP2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 PRKG2Q13237 762 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 PDCLQ13371 301 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 BFSP2Q13515 415 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 KRT81Q14533 505 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 KCTD2Q14681 263 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 TBCCQ15814 346 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 CCL15Q16663 113 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 FAM187BQ17R55 369 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 SLC9C1Q4G0N8 1177 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 LRRC24Q50LG9 513 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 CBWD5Q5RIA9 395 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 TREML2Q5T2D2 321 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 GPATCH4Q5T3I0 446 aaKnown RBP2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 SPATA1Q5VX52 437 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 LIPMQ5VYY2 423 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 DENND1BQ6P3S1 775 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 ACSM6Q6P461 480 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 SHC4Q6S5L8 630 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 MTHFD1LQ6UB35 978 aa2.69□□□□□ -1.98
SMARCB1-208ENST00000634926 LRRC8DQ7L1W4 858 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms