RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 MESDQ14696 234 aa22.56■■□□□ 1.2
SF1-220ENST00000626028 AGERQ15109 404 aa22.56■■□□□ 1.2
SF1-220ENST00000626028 TIGD7Q6NT04 549 aaPredicted RBP22.56■■□□□ 1.2
SF1-220ENST00000626028 ERAP2Q6P179 960 aa22.56■■□□□ 1.2
SF1-220ENST00000626028 CXorf40AQ8TE69 158 aa22.56■■□□□ 1.2
SF1-220ENST00000626028 ADAMTS14Q8WXS8 1223 aa22.56■■□□□ 1.2
SF1-220ENST00000626028 PANX2Q96RD6 677 aa22.56■■□□□ 1.2
SF1-220ENST00000626028 KLF6Q99612 283 aaPredicted RBP22.56■■□□□ 1.2
SF1-220ENST00000626028 FAM221BA6H8Z2 402 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 BUB1BO60566 1050 aaPredicted RBP22.55■■□□□ 1.2
SF1-220ENST00000626028 DKK1O94907 266 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 CD48P09326 243 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 FTH1P19P0C7X4 201 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 NFKBIAP25963 317 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 RGRP47804 291 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 TAS2R40P59535 323 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 GALNT2Q10471 571 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 MARC1Q5VT66 337 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 Q6ZSR6 202 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 RAB44Q7Z6P3 723 aaPredicted RBP22.55■■□□□ 1.2
SF1-220ENST00000626028 NETO2Q8NC67 525 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 OR13H1Q8NG92 308 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 PCDH19Q8TAB3 1148 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 CENPTQ96BT3 561 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 BMFQ96LC9 184 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 NUDCD1Q96RS6 583 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 MGME1Q9BQP7 344 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 RBSNQ9H1K0 784 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 FZD3Q9NPG1 666 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 AMACRQ9UHK6 382 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 ITM2BQ9Y287 266 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 BTBD3Q9Y2F9 522 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 NEUROG3Q9Y4Z2 214 aa22.55■■□□□ 1.2
SF1-220ENST00000626028 GOLGA4Q13439 2230 aaKnown RBP22.55■■□□□ 1.2
SF1-220ENST00000626028 RIOK3O14730 519 aaKnown RBP22.54■■□□□ 1.2
SF1-220ENST00000626028 CDK4P11802 303 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 CR2P20023 1033 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 MX2P20592 715 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 GARSP41250 739 aaKnown RBP22.54■■□□□ 1.2
SF1-220ENST00000626028 SCNN1BP51168 640 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 ZNF75DP51815 510 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 YPEL5P62699 121 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 MMRN1Q13201 1228 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 ATP13A4Q4VNC1 1196 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 NCBP2-AS2Q69YL0 99 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 KANSL1Q7Z3B3 1105 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 CAMK1DQ8IU85 385 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 TP53INP2Q8IXH6 220 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 TSGA13Q96PP4 275 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 PCDH12Q9NPG4 1184 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 FTSJ1Q9UET6 329 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 GGT7Q9UJ14 662 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 CA5BQ9Y2D0 317 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 ATP8A1Q9Y2Q0 1164 aa22.54■■□□□ 1.2
SF1-220ENST00000626028 SPTY2D1-AS1A0A0U1RR47 76 aa22.53■■□□□ 1.2
SF1-220ENST00000626028 POM121BA6NF01 834 aa22.53■■□□□ 1.2
SF1-220ENST00000626028 TRAFD1O14545 582 aaPredicted RBP22.53■■□□□ 1.2
SF1-220ENST00000626028 MUSKO15146 869 aa22.53■■□□□ 1.2
SF1-220ENST00000626028 CES1P23141 567 aa22.53■■□□□ 1.2
SF1-220ENST00000626028 CCNCP24863 283 aa22.53■■□□□ 1.2
SF1-220ENST00000626028 MMP12P39900 470 aa22.53■■□□□ 1.2
SF1-220ENST00000626028 MMP13P45452 471 aa22.53■■□□□ 1.2
SF1-220ENST00000626028 CLDN2P57739 230 aa22.53■■□□□ 1.2
SF1-220ENST00000626028 PFN3P60673 137 aa22.53■■□□□ 1.2
SF1-220ENST00000626028 IL9RQ01113 521 aa22.53■■□□□ 1.2
SF1-220ENST00000626028 PTK2BQ14289 1009 aa22.53■■□□□ 1.2
SF1-220ENST00000626028 IFI16Q16666 785 aaKnown RBP22.53■■□□□ 1.2
SF1-220ENST00000626028 PRAMEF14Q5SWL7 426 aa22.53■■□□□ 1.2
SF1-220ENST00000626028 PTAR1Q7Z6K3 402 aaPredicted RBP22.53■■□□□ 1.2
SF1-220ENST00000626028 TEX26Q8N6G2 289 aa22.53■■□□□ 1.2
SF1-220ENST00000626028 CALR3Q96L12 384 aaKnown RBP22.53■■□□□ 1.2
SF1-220ENST00000626028 MYOCQ99972 504 aa22.53■■□□□ 1.2
SF1-220ENST00000626028 KNTC1P50748 2209 aa22.53■■□□□ 1.2
SF1-220ENST00000626028 RAD51BO15315 384 aa22.52■■□□□ 1.2
SF1-220ENST00000626028 HTRA2O43464 458 aaPredicted RBP22.52■■□□□ 1.2
SF1-220ENST00000626028 C1SP09871 688 aa22.52■■□□□ 1.2
SF1-220ENST00000626028 KDELR1P24390 212 aa22.52■■□□□ 1.2
SF1-220ENST00000626028 CYLC1P35663 651 aaPredicted RBP22.52■■□□□ 1.2
SF1-220ENST00000626028 GJC1P36383 396 aa22.52■■□□□ 1.2
SF1-220ENST00000626028 SPA17Q15506 151 aa22.52■■□□□ 1.2
SF1-220ENST00000626028 ZFYVE27Q5T4F4 411 aa22.52■■□□□ 1.2
SF1-220ENST00000626028 GATAD2AQ86YP4 633 aa22.52■■□□□ 1.2
SF1-220ENST00000626028 SLC22A18ASQ8N1D0 253 aa22.52■■□□□ 1.2
SF1-220ENST00000626028 RNF157Q96PX1 679 aa22.52■■□□□ 1.2
SF1-220ENST00000626028 SCNM1Q9BWG6 230 aa22.52■■□□□ 1.2
SF1-220ENST00000626028 DDX56Q9NY93 547 aaKnown RBP22.52■■□□□ 1.2
SF1-220ENST00000626028 PCDHGA1Q9Y5H4 931 aa22.52■■□□□ 1.2
SF1-220ENST00000626028 PLXNB3Q9ULL4 1909 aa22.51■■□□□ 1.19
SF1-220ENST00000626028 MAP1BP46821 2468 aaKnown RBP22.51■■□□□ 1.19
SF1-220ENST00000626028 SPEGQ15772 3267 aa22.51■■□□□ 1.19
SF1-220ENST00000626028 A0A0A6YYK5 440 aaPredicted RBP22.51■■□□□ 1.19
SF1-220ENST00000626028 MATN3O15232 486 aa22.51■■□□□ 1.19
SF1-220ENST00000626028 MFSD11O43934 449 aa22.51■■□□□ 1.19
SF1-220ENST00000626028 MMP20O60882 483 aa22.51■■□□□ 1.19
SF1-220ENST00000626028 FECHP22830 423 aa22.51■■□□□ 1.19
SF1-220ENST00000626028 MAGEA1P43355 309 aa22.51■■□□□ 1.19
SF1-220ENST00000626028 HNRNPKP61978 463 aaKnown RBP eCLIP22.51■■□□□ 1.19
SF1-220ENST00000626028 ALG1LQ6GMV1 187 aa22.51■■□□□ 1.19
SF1-220ENST00000626028 PARGQ86W56 976 aa22.51■■□□□ 1.19
SF1-220ENST00000626028 CPNE8Q86YQ8 564 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms