RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 TOR1BO14657 336 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 SCAMP1O15126 338 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 FFAR2O15552 330 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 NME1P15531 152 aaKnown RBP10.94□□□□□ -0.66
SSBP4-215ENST00000625926 TCF4P15884 667 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 AMPD1P23109 780 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 SERPINA4P29622 427 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 THOP1P52888 689 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 YPEL5P62699 121 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 DAB2P98082 770 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 E2F1Q01094 437 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 CAMK2BQ13554 666 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 SMTNL2Q2TAL5 461 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 TMCO3Q6UWJ1 677 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 ARHGAP36Q6ZRI8 547 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 POLNQ7Z5Q5 900 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 PDCD7Q8N8D1 485 aaKnown RBP10.94□□□□□ -0.66
SSBP4-215ENST00000625926 TEKT4Q8WW24 435 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 ZNF599Q96NL3 588 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 CSPG4P5Q96PW8 444 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 DUSP23Q9BVJ7 150 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 XPO4Q9C0E2 1151 aaKnown RBP10.94□□□□□ -0.66
SSBP4-215ENST00000625926 ATP13A3Q9H7F0 1226 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 PCDH12Q9NPG4 1184 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.94□□□□□ -0.66
SSBP4-215ENST00000625926 NLGN3Q9NZ94 848 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 SEPT3Q9UH03 358 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 ANAPC7Q9UJX3 599 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 LAMA1P25391 3075 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 BPTFQ12830 3046 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 RIOK3O14730 519 aaKnown RBP10.93□□□□□ -0.66
SSBP4-215ENST00000625926 CBFA2T2O43439 604 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 GIMD1P0DJR0 217 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 CKMT1AP12532 417 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 JUNDP17535 347 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 HNRNPH3P31942 346 aaKnown RBP10.93□□□□□ -0.66
SSBP4-215ENST00000625926 SSR1P43307 286 aaKnown RBP10.93□□□□□ -0.66
SSBP4-215ENST00000625926 RGRP47804 291 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 SCNN1BP51168 640 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 AP1S1P61966 158 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 POLR2LP62875 67 aaKnown RBP10.93□□□□□ -0.66
SSBP4-215ENST00000625926 BCL2L1Q07817 233 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 SLC10A7Q0GE19 358 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 EIF2B5Q13144 721 aaKnown RBP10.93□□□□□ -0.66
SSBP4-215ENST00000625926 LBRQ14739 615 aaKnown RBP10.93□□□□□ -0.66
SSBP4-215ENST00000625926 LRRC14Q15048 493 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 HADHQ16836 314 aaKnown RBP10.93□□□□□ -0.66
SSBP4-215ENST00000625926 TPRG1LQ5T0D9 272 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 TMCO4Q5TGY1 634 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 TXNRD3NBQ6F5E7 133 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 TP53INP2Q8IXH6 220 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 PAF1Q8N7H5 531 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 TP53I13Q8NBR0 393 aaPredicted RBP10.93□□□□□ -0.66
SSBP4-215ENST00000625926 ZNF548Q8NEK5 533 aaPredicted RBP10.93□□□□□ -0.66
SSBP4-215ENST00000625926 MDM1Q8TC05 714 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 BTN2A2Q8WVV5 523 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 BTBD6Q96KE9 485 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 PSKH2Q96QS6 385 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 USP29Q9HBJ7 922 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 PCDH18Q9HCL0 1135 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 MBNL1Q9NR56 388 aaKnown RBP10.93□□□□□ -0.66
SSBP4-215ENST00000625926 EVA1BQ9NVM1 165 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 DKK4Q9UBT3 224 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 KLF15Q9UIH9 416 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 CSNK1G3Q9Y6M4 447 aa10.93□□□□□ -0.66
SSBP4-215ENST00000625926 ASCC3Q8N3C0 2202 aaKnown RBP10.93□□□□□ -0.66
SSBP4-215ENST00000625926 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.92□□□□□ -0.66
SSBP4-215ENST00000625926 CFAP69A5D8W1 941 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 TMEM110-MUSTN1A8MSY1 372 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 K7ESM1 405 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 MUSKO15146 869 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 AQP9O43315 295 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 LZTS3O60299 673 aaPredicted RBP10.92□□□□□ -0.66
SSBP4-215ENST00000625926 H2AFZP0C0S5 128 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 C6P13671 934 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 SERPINB6P35237 376 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 IGFALSP35858 605 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 HSPA9P38646 679 aaKnown RBP10.92□□□□□ -0.66
SSBP4-215ENST00000625926 EIF4A3P38919 411 aaKnown RBP10.92□□□□□ -0.66
SSBP4-215ENST00000625926 LIG3P49916 1009 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 PEX5P50542 639 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 DUSP3P51452 185 aaPredicted RBP10.92□□□□□ -0.66
SSBP4-215ENST00000625926 CLDN6P56747 220 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 SLC25A11Q02978 314 aaKnown RBP10.92□□□□□ -0.66
SSBP4-215ENST00000625926 CYP4F3Q08477 520 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 TARDBPQ13148 414 aaKnown RBP eCLIP10.92□□□□□ -0.66
SSBP4-215ENST00000625926 TRIM14Q14142 442 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 KRT81Q14533 505 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 ZNF235Q14590 738 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 NUMA1Q14980 2115 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 AGERQ15109 404 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 HES3Q5TGS1 186 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 SPECC1LQ69YQ0 1117 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 KDM7AQ6ZMT4 941 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 H2AFVQ71UI9 128 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 ZSWIM9Q86XI8 627 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 CACTIN-AS1Q8N1I8 211 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 BBS5Q8N3I7 341 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 FAM181AQ8N9Y4 354 aa10.92□□□□□ -0.66
SSBP4-215ENST00000625926 OR8K1Q8NGG5 319 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms