RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 RASGRP2Q7LDG7 609 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 TRABD2AQ86V40 505 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 LINC01465Q8N7H1 131 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 ABHD11Q8NFV4 315 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 SLC9A6Q92581 669 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 DHTKD1Q96HY7 919 aaPredicted RBP4.35□□□□□ -1.71
ATRX-209ENST00000623242 CAPNS2Q96L46 248 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 SCLT1Q96NL6 688 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 BBC3Q96PG8 261 aaPredicted RBP4.35□□□□□ -1.71
ATRX-209ENST00000623242 PIGSQ96S52 555 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 PARK7Q99497 189 aaKnown RBP4.35□□□□□ -1.71
ATRX-209ENST00000623242 ZMYND12Q9H0C1 365 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 CPVLQ9H3G5 476 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 SYNPO2LQ9H987 977 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 KCNK9Q9NPC2 374 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 HOXC10Q9NYD6 342 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 IFNKQ9P0W0 207 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 MGAT4CQ9UBM8 478 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 RWDD2AQ9UIY3 292 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 FEM1BQ9UK73 627 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 PCDHA12Q9UN75 941 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 AFG3L2Q9Y4W6 797 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 PCDHB2Q9Y5E7 798 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 DDX60LQ5H9U9 1706 aaKnown RBP4.35□□□□□ -1.71
ATRX-209ENST00000623242 LAMB1P07942 1786 aa4.35□□□□□ -1.71
ATRX-209ENST00000623242 ZNF646O15015 1829 aaPredicted RBP4.35□□□□□ -1.71
ATRX-209ENST00000623242 A0A087X1B8 175 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 PVALEFA0A1B0GWK0 134 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 H0Y3Z8 333 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 GCOM1H8Y6P7 765 aaPredicted RBP4.34□□□□□ -1.71
ATRX-209ENST00000623242 QSOX1O00391 747 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 TMPRSS11DO60235 418 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 TBCAO75347 108 aaKnown RBP4.34□□□□□ -1.71
ATRX-209ENST00000623242 ERLIN1O75477 346 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 RPN1P04843 607 aaKnown RBP4.34□□□□□ -1.71
ATRX-209ENST00000623242 NPSP0C0P6 89 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 CCDC175P0C221 793 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 POLR2MP0CAP2 368 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 MYCLP12524 364 aaPredicted RBP4.34□□□□□ -1.71
ATRX-209ENST00000623242 PEPDP12955 493 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 APEHP13798 732 aaKnown RBP4.34□□□□□ -1.71
ATRX-209ENST00000623242 TRIM21P19474 475 aaKnown RBP4.34□□□□□ -1.71
ATRX-209ENST00000623242 CASQ1P31415 396 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 CXCR5P32302 372 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 CYLC1P35663 651 aaPredicted RBP4.34□□□□□ -1.71
ATRX-209ENST00000623242 MTIF2P46199 727 aaKnown RBP4.34□□□□□ -1.71
ATRX-209ENST00000623242 GSTM5P46439 218 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 PPM1FP49593 454 aaPredicted RBP4.34□□□□□ -1.71
ATRX-209ENST00000623242 DGKQP52824 942 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 POLE2P56282 527 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 ARL4CP56559 192 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 C1QTNF8P60827 252 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 CCNA1P78396 465 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 UBXN1Q04323 297 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 PPFIA1Q13136 1202 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 SEMA3BQ13214 749 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 PNOCQ13519 176 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 CUL4BQ13620 913 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 KCNB1Q14721 858 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 COG2Q14746 738 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 P3H1Q32P28 736 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 ZNF362Q5T0B9 420 aaPredicted RBP4.34□□□□□ -1.71
ATRX-209ENST00000623242 KLHL10Q6JEL2 608 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 NFRKBQ6P4R8 1299 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 KIRREL2Q6UWL6 708 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 NAPRTQ6XQN6 538 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 RRAGAQ7L523 313 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 CACNA2D4Q7Z3S7 1137 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 ANKRD23Q86SG2 305 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 TMTC1Q8IUR5 882 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 P3H2Q8IVL5 708 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 CCDC117Q8IWD4 279 aaPredicted RBP4.34□□□□□ -1.71
ATRX-209ENST00000623242 SFTPA1Q8IWL2 248 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 LRRC8AQ8IWT6 810 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 ADGRF4Q8IZF3 695 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 SRBD1Q8N5C6 995 aaKnown RBP4.34□□□□□ -1.71
ATRX-209ENST00000623242 PNPLA1Q8N8W4 532 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 ENGASEQ8NFI3 743 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 CSGALNACT1Q8TDX6 532 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 PPM1EQ8WY54 764 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 OVCA2Q8WZ82 227 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 NPIPB3Q92617 1050 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 REPS1Q96D71 796 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 PAGE5Q96GU1 130 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 VPS50Q96JG6 964 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 FAM20AQ96MK3 541 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 IWS1Q96ST2 819 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 BAG1Q99933 345 aaPredicted RBP4.34□□□□□ -1.71
ATRX-209ENST00000623242 FAM167BQ9BTA0 163 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 TSGA10Q9BZW7 698 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 CCSER1Q9C0I3 900 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 PRDM13Q9H4Q3 707 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 THAP9Q9H5L6 903 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 RAVER2Q9HCJ3 691 aaKnown RBP4.34□□□□□ -1.71
ATRX-209ENST00000623242 RIC8AQ9NPQ8 531 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 FBXO28Q9NVF7 368 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 ASIC5Q9NY37 505 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 MAP3K20Q9NYL2 800 aaKnown RBP4.34□□□□□ -1.71
ATRX-209ENST00000623242 DDX25Q9UHL0 483 aaKnown RBP4.34□□□□□ -1.71
ATRX-209ENST00000623242 MAD2L2Q9UI95 211 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms