RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 NOS2P35228 1153 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 GALNT2Q10471 571 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 LAMC2Q13753 1193 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 KCNJ8Q15842 424 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 ANO4Q32M45 955 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 GLRA4Q5JXX5 417 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 FAM219BQ5XKK7 198 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 LRRC8EQ6NSJ5 796 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 ACVR1CQ8NER5 493 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 OR52K1Q8NGK4 314 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 CANT1Q8WVQ1 401 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 SLC39A3Q9BRY0 314 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 HERC2P3Q9BVR0 1158 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 ZNF385DQ9H6B1 395 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 TUBA8Q9NY65 449 aaPredicted RBP13.14□□□□□ -0.31
CHD1L-210ENST00000622533 TRHDEQ9UKU6 1024 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 CDYLQ9Y232 598 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 EVPLQ92817 2033 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 TRIM64CA6NLI5 447 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 FAM155AB1AL88 458 aaPredicted RBP13.14□□□□□ -0.31
CHD1L-210ENST00000622533 EEF2KO00418 725 aaKnown RBP13.14□□□□□ -0.31
CHD1L-210ENST00000622533 DYNC1LI2O43237 492 aaPredicted RBP13.14□□□□□ -0.31
CHD1L-210ENST00000622533 GRIA4P48058 902 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 GLRBP48167 497 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 POLD2P49005 469 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 PPP4R4Q6NUP7 873 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 KCNMB4Q86W47 210 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 DEFB106AQ8N104 65 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 CADM3Q8N126 398 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 CNTD1Q8N815 330 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 DOK1Q99704 481 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 ADI1Q9BV57 179 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 ACE2Q9BYF1 805 aaPredicted RBP13.14□□□□□ -0.31
CHD1L-210ENST00000622533 SNX25Q9H3E2 840 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 SETD4Q9NVD3 440 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 ATAD3AQ9NVI7 634 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 HACD3Q9P035 362 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 AURKCQ9UQB9 309 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 SLC27A5Q9Y2P5 690 aa13.14□□□□□ -0.31
CHD1L-210ENST00000622533 DNAJC25-GNG10A0A024R161 153 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 ZCWPW2A0A1B0GU75 182 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 VTNP04004 478 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 LGALS2P05162 132 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 PGK2P07205 417 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 NR4A1P22736 598 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 SLC7A1P30825 629 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 GNL1P36915 607 aaPredicted RBP13.13□□□□□ -0.31
CHD1L-210ENST00000622533 NAGLUP54802 743 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 INTS6LQ5JSJ4 861 aaKnown RBP13.13□□□□□ -0.31
CHD1L-210ENST00000622533 TMCO5AQ8N6Q1 288 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 TRUB1Q8WWH5 349 aaKnown RBP13.13□□□□□ -0.31
CHD1L-210ENST00000622533 COPS5Q92905 334 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 TNIP3Q96KP6 325 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 SLC9A7Q96T83 725 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 AGAP2Q99490 1192 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 UNKQ9C0B0 810 aaKnown RBP13.13□□□□□ -0.31
CHD1L-210ENST00000622533 KLHL25Q9H0H3 589 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 GBA3Q9H227 469 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 CCDC68Q9H2F9 335 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 CROTQ9UKG9 612 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 POU2F3Q9UKI9 436 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 PTPRFP10586 1907 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 TRIP11Q15643 1979 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 RALGAPA2Q2PPJ7 1873 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 LAMA2P24043 3122 aaKnown RBP13.13□□□□□ -0.31
CHD1L-210ENST00000622533 ASB14A6NK59 587 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 FZD9O00144 591 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 NFKBIEO00221 500 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 PEX10O60683 326 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 POLR2IP36954 125 aaKnown RBP13.13□□□□□ -0.31
CHD1L-210ENST00000622533 PLCL1Q15111 1095 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 ZBTB6Q15916 424 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 GADL1Q6ZQY3 521 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 ZNF420Q8TAQ5 688 aaPredicted RBP13.13□□□□□ -0.31
CHD1L-210ENST00000622533 ADAMTS16Q8TE57 1224 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 NT5C3BQ969T7 300 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 FAM149B1Q96BN6 582 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 VPS39Q96JC1 886 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 ZNF560Q96MR9 790 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 PPP1R16BQ96T49 567 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 VAT1Q99536 393 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 DPEP3Q9H4B8 488 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 RIC8BQ9NVN3 520 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 SUCOQ9UBS9 1254 aaKnown RBP13.13□□□□□ -0.31
CHD1L-210ENST00000622533 NME7Q9Y5B8 376 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 NOX1Q9Y5S8 564 aa13.13□□□□□ -0.31
CHD1L-210ENST00000622533 HEATR9A2RTY3 570 aa13.12□□□□□ -0.31
CHD1L-210ENST00000622533 DCLK1O15075 740 aa13.12□□□□□ -0.31
CHD1L-210ENST00000622533 PSMD3O43242 534 aa13.12□□□□□ -0.31
CHD1L-210ENST00000622533 B4GAT1O43505 415 aa13.12□□□□□ -0.31
CHD1L-210ENST00000622533 SNAP91O60641 907 aa13.12□□□□□ -0.31
CHD1L-210ENST00000622533 DDHD2O94830 711 aa13.12□□□□□ -0.31
CHD1L-210ENST00000622533 CD4P01730 458 aa13.12□□□□□ -0.31
CHD1L-210ENST00000622533 CCNA2P20248 432 aa13.12□□□□□ -0.31
CHD1L-210ENST00000622533 PTPN3P26045 913 aa13.12□□□□□ -0.31
CHD1L-210ENST00000622533 PNPLA4P41247 253 aa13.12□□□□□ -0.31
CHD1L-210ENST00000622533 MERTKQ12866 999 aa13.12□□□□□ -0.31
CHD1L-210ENST00000622533 VGLL4Q14135 290 aa13.12□□□□□ -0.31
CHD1L-210ENST00000622533 SF3B4Q15427 424 aaKnown RBP eCLIP13.12□□□□□ -0.312e-6■■■■■ 30.1
CHD1L-210ENST00000622533 KIZQ2M2Z5 673 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms