RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 SLC26A3P40879 764 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 ACOT2P49753 483 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 GSTO1P78417 241 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 AQP6Q13520 282 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 SLC35G1Q2M3R5 365 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 HYIQ5T013 277 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 TFAP2DQ7Z6R9 452 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 IFNL1Q8IU54 200 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 OR6F1Q8NGZ6 308 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 ADAMTS19Q8TE59 1207 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 KAT5Q92993 513 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 WDR83Q9BRX9 315 aaKnown RBP7.97□□□□□ -1.13
VPS11-209ENST00000622309 TTYH2Q9BSA4 534 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 NTPCRQ9BSD7 190 aaKnown RBP7.97□□□□□ -1.13
VPS11-209ENST00000622309 C9orf16Q9BUW7 83 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 RHOBTB2Q9BYZ6 727 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 TIGARQ9NQ88 270 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 KCND2Q9NZV8 630 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 ACTR3BQ9P1U1 418 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 CPSF3Q9UKF6 684 aaKnown RBP7.97□□□□□ -1.13
VPS11-209ENST00000622309 HCN4Q9Y3Q4 1203 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 PLK4O00444 970 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 MEIS1O00470 390 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 NEMP1O14524 444 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 TSPAN4O14817 238 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 ABCB7O75027 752 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 ITGAVP06756 1048 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 SLURP2P0DP57 97 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 FGF3P11487 239 aaPredicted RBP7.97□□□□□ -1.13
VPS11-209ENST00000622309 CYP11B1P15538 503 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 ATF6P18850 670 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 IMPDH1P20839 514 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 TBXAS1P24557 533 aaPredicted RBP7.97□□□□□ -1.13
VPS11-209ENST00000622309 GABRB2P47870 512 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 NT5C2P49902 561 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 ADCY7P51828 1080 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 OR2B6P58173 313 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 ABCE1P61221 599 aaKnown RBP7.97□□□□□ -1.13
VPS11-209ENST00000622309 GTF2IP78347 998 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 TARDBPQ13148 414 aaKnown RBP eCLIP7.97□□□□□ -1.13
VPS11-209ENST00000622309 HIST2H2ACQ16777 129 aaPredicted RBP7.97□□□□□ -1.13
VPS11-209ENST00000622309 BMT2Q1RMZ1 405 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 ESCO2Q56NI9 601 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 HMBOX1Q6NT76 420 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 LINC00523Q86TU6 105 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 LYSMD2Q8IV50 215 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 IGDCC3Q8IVU1 814 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 LPGAT1Q92604 370 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 CDKL2Q92772 493 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 PROX1Q92786 737 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 CNDP1Q96KN2 507 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 KCNN2Q9H2S1 579 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 IKZF4Q9H2S9 585 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 FBXO8Q9NRD0 319 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 SAGE1Q9NXZ1 904 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 IL20Q9NYY1 176 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 AURKCQ9UQB9 309 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 CNTNAP2Q9UHC6 1331 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 SAGE2PA6NJ88 616 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 TRIM77I1YAP6 450 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 SLC9A3R1O14745 358 aaPredicted RBP7.97□□□□□ -1.13
VPS11-209ENST00000622309 ARHGEF9O43307 516 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 UGT2B11O75310 529 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 FAM13AO94988 1023 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 IL18RAPO95256 599 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 PTTG1O95997 202 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 CD4P01730 458 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 PGK2P07205 417 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 BMP2P12643 396 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 IFI30P13284 250 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 ICAM2P13598 275 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 CAPGP40121 348 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 CDKN1CP49918 316 aaPredicted RBP7.97□□□□□ -1.13
VPS11-209ENST00000622309 MFAP3P55082 362 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 RHAGQ02094 409 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 TNK2Q07912 1038 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 PPIL2Q13356 520 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 SNTA1Q13424 505 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 SLC9B1Q4ZJI4 515 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 TTBK2Q6IQ55 1244 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 CORO6Q6QEF8 472 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 PAGE2Q7Z2X7 111 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 ZNF438Q7Z4V0 828 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 UNC45BQ8IWX7 931 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 LGI2Q8N0V4 545 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 BEST2Q8NFU1 509 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 OR6Q1Q8NGQ2 317 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 OR2T3Q8NH03 318 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 AGR3Q8TD06 166 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 SEPT1Q8WYJ6 367 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 CEP19Q96LK0 163 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 HEXIM2Q96MH2 286 aaKnown RBP7.97□□□□□ -1.13
VPS11-209ENST00000622309 APBA2Q99767 749 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 GON7Q9BXV9 100 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 FBXO28Q9NVF7 368 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 BAG5Q9UL15 447 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 AFG3L2Q9Y4W6 797 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 PMF1-BGLAPU3KQ54 211 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 CACNA1SQ13698 1873 aa7.96□□□□□ -1.13
VPS11-209ENST00000622309 OR5K3A6NET4 321 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms